Cow genome map

Conread name: Ss1.1-Mixc-0025o19.5

Conread position: 18-376
Cow position: chr12:29770830-29770486 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 61

Conread position: 18-378
Cow position: chr12:27037703-27037355 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 28

Conread position: 27-386
Cow position: chr12:1773913-1773558 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 51

Conread position: 29-319
Cow position: chr12:28471393-28471683 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 50

Conread position: 29-370
Cow position: chr12:39465334-39465667 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 143

Conread position: 31-175
Cow position: chr12:13156430-13156577 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 31-198
Cow position: chr12:44905398-44905563 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 125

Conread position: 31-202
Cow position: chr12:3994707-3994882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 31-465
Cow position: chr12:5635690-5635269 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 32-346
Cow position: chr12:35377958-35378264 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 88

Conread position: 34-396
Cow position: chr12:33457908-33458259 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 240, 37

Conread position: 34-417
Cow position: chr12:41083826-41084179 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 139

Conread position: 36-381
Cow position: chr12:34007062-34007398 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 128

Conread position: 38-148
Cow position: chr12:7108953-7109063 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 38

Conread position: 38-148
Cow position: chr12:17495427-17495319 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 39

Conread position: 38-167
Cow position: chr12:25805345-25805219 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 38-169
Cow position: chr12:23154702-23154569 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 38

Conread position: 38-169
Cow position: chr12:24755260-24755133 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 39

Conread position: 38-180
Cow position: chr12:12178686-12178826 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 54

Conread position: 38-191
Cow position: chr12:30728474-30728320 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 93

Conread position: 38-192
Cow position: chr12:24180662-24180812 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 39

Conread position: 38-193
Cow position: chr12:46673465-46673313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 39

Conread position: 38-195
Cow position: chr12:19039847-19039690 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 20

Conread position: 38-196
Cow position: chr12:4182931-4182770 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 38-198
Cow position: chr12:31841202-31841364 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 38-199
Cow position: chr12:1848773-1848611 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 38-199
Cow position: chr12:36568292-36568137 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 30

Conread position: 38-201
Cow position: chr12:6226882-6226725 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 91, 31

Conread position: 38-201
Cow position: chr12:18769309-18769148 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 38

Conread position: 38-201
Cow position: chr12:26869034-26868869 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 38-201
Cow position: chr12:30753487-30753648 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 39

Conread position: 38-202
Cow position: chr12:5658311-5658143 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 38-202
Cow position: chr12:5940108-5940274 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 38-202
Cow position: chr12:11583166-11583321 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 31

Conread position: 38-202
Cow position: chr12:12017641-12017804 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 42

Conread position: 38-202
Cow position: chr12:17716848-17717000 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 38-202
Cow position: chr12:20326535-20326700 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 38-202
Cow position: chr12:24107773-24107619 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 19

Conread position: 38-202
Cow position: chr12:29162046-29161889 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 40

Conread position: 38-202
Cow position: chr12:40270321-40270166 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 15

Conread position: 38-207
Cow position: chr12:40158475-40158307 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 61

Conread position: 38-211
Cow position: chr12:29969341-29969514 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 101

Conread position: 38-213
Cow position: chr12:17007962-17008140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 117

Conread position: 38-213
Cow position: chr12:28011134-28010962 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 168, 39

Conread position: 38-214
Cow position: chr12:15240959-15240785 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 134, 39

Conread position: 38-214
Cow position: chr12:25177828-25177643 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 38-217
Cow position: chr12:8922024-8921846 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 112

Conread position: 38-217
Cow position: chr12:17472455-17472284 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 31

Conread position: 38-217
Cow position: chr12:24032771-24032945 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 39

Conread position: 38-217
Cow position: chr12:25455879-25456059 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 148

Conread position: 38-217
Cow position: chr12:30476242-30476422 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 168

Conread position: 38-217
Cow position: chr12:32391610-32391788 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 60, 39

Conread position: 38-217
Cow position: chr12:44766849-44767016 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 168, 37

Conread position: 38-225
Cow position: chr12:47928980-47929159 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 47

Conread position: 38-254
Cow position: chr12:17702468-17702257 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 82

Conread position: 38-256
Cow position: chr12:19372341-19372136 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 110

Conread position: 38-304
Cow position: chr12:3055902-3056153 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 82

Conread position: 38-305
Cow position: chr12:40028990-40028732 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 38

Conread position: 38-313
Cow position: chr12:941397-941670 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 167

Conread position: 38-350
Cow position: chr12:30170432-30170735 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 61

Conread position: 38-356
Cow position: chr12:2711257-2711571 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 81, 40

Conread position: 38-356
Cow position: chr12:24211181-24211480 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 91

Conread position: 38-366
Cow position: chr12:23797868-23798182 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 83

Conread position: 38-366
Cow position: chr12:29780137-29779831 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 39

Conread position: 38-366
Cow position: chr12:44517971-44517655 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 38

Conread position: 38-369
Cow position: chr12:29484125-29483802 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 40

Conread position: 38-371
Cow position: chr12:45814500-45814174 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 167

Conread position: 38-372
Cow position: chr12:17774570-17774883 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 40

Conread position: 38-376
Cow position: chr12:5800800-5801136 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 26

Conread position: 38-376
Cow position: chr12:41473860-41474182 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 242, 31

Conread position: 38-381
Cow position: chr12:31959659-31959977 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 61

Conread position: 38-381
Cow position: chr12:41580877-41581209 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 165

Conread position: 38-392
Cow position: chr12:9914556-9914900 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 31

Conread position: 38-392
Cow position: chr12:18766216-18765865 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 60

Conread position: 38-392
Cow position: chr12:30805623-30805963 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 219, 37

Conread position: 38-408
Cow position: chr12:42254423-42254791 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 174

Conread position: 38-409
Cow position: chr12:35771267-35770897 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 176

Conread position: 38-411
Cow position: chr12:42167410-42167756 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 71

Conread position: 38-412
Cow position: chr12:42181376-42181002 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 38-412
Cow position: chr12:43942245-43942598 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 202, 39

Conread position: 38-413
Cow position: chr12:19154846-19154491 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 28

Conread position: 38-415
Cow position: chr12:30662184-30661820 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 39

Conread position: 38-420
Cow position: chr12:11056641-11057005 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 106

Conread position: 38-421
Cow position: chr12:15938502-15938132 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 38-421
Cow position: chr12:37770640-37771001 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 59

Conread position: 38-422
Cow position: chr12:4162606-4162237 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 117

Conread position: 38-422
Cow position: chr12:5459028-5459388 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 39

Conread position: 38-422
Cow position: chr12:26782646-26783010 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 137

Conread position: 38-424
Cow position: chr12:10895783-10895412 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 33

Conread position: 38-425
Cow position: chr12:19869236-19869617 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 286, 40

Conread position: 38-425
Cow position: chr12:31228339-31228722 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 320, 39

Conread position: 38-430
Cow position: chr12:4370998-4371392 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 262
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 39

Conread position: 38-430
Cow position: chr12:19508807-19508420 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 39, 161

Conread position: 38-430
Cow position: chr12:23574535-23574914 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 38

Conread position: 38-431
Cow position: chr12:35368408-35368789 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 39

Conread position: 38-432
Cow position: chr12:5714393-5714764 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 223, 39

Conread position: 38-432
Cow position: chr12:15358093-15358489 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 162

Conread position: 38-432
Cow position: chr12:17080023-17080412 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 22

Conread position: 38-432
Cow position: chr12:21393470-21393856 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 58

Conread position: 38-432
Cow position: chr12:32169301-32169692 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 147

Conread position: 38-432
Cow position: chr12:42602475-42602091 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 61

Conread position: 38-432
Cow position: chr12:45363122-45363508 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 256
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 113

Conread position: 38-432
Cow position: chr12:48415748-48415374 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 117, 39

Conread position: 38-434
Cow position: chr12:19866007-19866392 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 39

Conread position: 38-439
Cow position: chr12:37993961-37993569 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 106

Conread position: 38-440
Cow position: chr12:3076858-3076470 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 263
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 161

Conread position: 38-451
Cow position: chr12:6241074-6241489 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 94

Conread position: 38-451
Cow position: chr12:17881631-17882016 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 31

Conread position: 38-451
Cow position: chr12:20777166-20776768 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 33, 57

Conread position: 38-454
Cow position: chr12:35780162-35779756 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 167

Conread position: 38-458
Cow position: chr12:22515975-22515568 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 116

Conread position: 38-458
Cow position: chr12:34332871-34333284 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 10

Conread position: 38-462
Cow position: chr12:25561135-25561543 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 40

Conread position: 38-462
Cow position: chr12:42283072-42282664 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 29

Conread position: 38-467
Cow position: chr12:18388517-18388107 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 323, 39

Conread position: 38-478
Cow position: chr12:31530049-31530491 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 196

Conread position: 38-478
Cow position: chr12:40910526-40910095 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 39-172
Cow position: chr12:37123278-37123401 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 39-189
Cow position: chr12:42698457-42698309 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 38

Conread position: 39-193
Cow position: chr12:4134434-4134588 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 30

Conread position: 39-195
Cow position: chr12:35218639-35218485 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 38

Conread position: 39-202
Cow position: chr12:15162915-15163076 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 39

Conread position: 39-227
Cow position: chr12:34385748-34385565 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 39

Conread position: 39-250
Cow position: chr12:18937153-18937371 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 177

Conread position: 39-256
Cow position: chr12:3579046-3579258 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 164

Conread position: 39-378
Cow position: chr12:25320689-25321009 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 60

Conread position: 39-432
Cow position: chr12:31532638-31532263 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 38

Conread position: 39-432
Cow position: chr12:35310907-35310536 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 234, 38

Conread position: 39-432
Cow position: chr12:36501186-36500801 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 53

Conread position: 39-434
Cow position: chr12:42966766-42967143 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 38

Conread position: 39-439
Cow position: chr12:17270309-17270690 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 20

Conread position: 39-462
Cow position: chr12:27803284-27802886 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 277
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 109

Conread position: 39-480
Cow position: chr12:9143159-9143582 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 109

Conread position: 40-174
Cow position: chr12:46635178-46635046 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 37

Conread position: 40-189
Cow position: chr12:3880489-3880339 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 40-201
Cow position: chr12:28213285-28213440 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 40-202
Cow position: chr12:22047236-22047398 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 106

Conread position: 40-211
Cow position: chr12:12700008-12699830 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 37

Conread position: 40-213
Cow position: chr12:21486351-21486521 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 140, 37

Conread position: 40-353
Cow position: chr12:34466235-34465934 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 247, 32

Conread position: 40-362
Cow position: chr12:17001025-17001337 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 159

Conread position: 40-362
Cow position: chr12:44596047-44595731 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 89

Conread position: 40-373
Cow position: chr12:3950584-3950256 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 136

Conread position: 40-384
Cow position: chr12:28257287-28256954 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 64

Conread position: 40-406
Cow position: chr12:34274231-34274613 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 45

Conread position: 40-409
Cow position: chr12:33323732-33323371 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 167

Conread position: 40-414
Cow position: chr12:20071818-20071442 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 171

Conread position: 40-415
Cow position: chr12:41091296-41091664 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 134

Conread position: 40-432
Cow position: chr12:6410961-6410590 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 259, 37

Conread position: 40-432
Cow position: chr12:29899670-29899274 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 151

Conread position: 40-432
Cow position: chr12:30590543-30590915 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 80

Conread position: 40-479
Cow position: chr12:42160786-42160369 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 281
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 80

Conread position: 41-198
Cow position: chr12:9229714-9229564 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 36

Conread position: 41-305
Cow position: chr12:731167-730914 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 216, 37

Conread position: 41-347
Cow position: chr12:18964162-18963864 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 40

Conread position: 42-163
Cow position: chr12:36954606-36954487 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 35

Conread position: 42-189
Cow position: chr12:8710600-8710739 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 42-198
Cow position: chr12:41214553-41214401 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 35

Conread position: 42-202
Cow position: chr12:28650721-28650881 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 87

Conread position: 42-211
Cow position: chr12:27563068-27562893 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 0

Conread position: 42-319
Cow position: chr12:12579256-12578997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 42

Conread position: 42-356
Cow position: chr12:5905826-5906129 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 195, 35

Conread position: 42-365
Cow position: chr12:2286350-2286663 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 53

Conread position: 42-366
Cow position: chr12:6210388-6210074 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 197, 35

Conread position: 42-425
Cow position: chr12:24662884-24663259 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 232, 70

Conread position: 42-427
Cow position: chr12:15429831-15429453 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 250
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 127

Conread position: 42-430
Cow position: chr12:6720088-6720492 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 209

Conread position: 42-431
Cow position: chr12:30745482-30745861 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 108

Conread position: 42-432
Cow position: chr12:15089263-15089662 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 141

Conread position: 42-432
Cow position: chr12:18577618-18577973 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 215, 35

Conread position: 42-432
Cow position: chr12:39486198-39486575 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 265
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 77

Conread position: 42-458
Cow position: chr12:19502651-19502240 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 289
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 107

Conread position: 42-463
Cow position: chr12:18020622-18021057 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 36, 80

Conread position: 43-409
Cow position: chr12:41159360-41159713 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 54

Conread position: 43-417
Cow position: chr12:27563617-27563245 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 44-417
Cow position: chr12:5632103-5631753 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 246, 34

Conread position: 45-202
Cow position: chr12:3510335-3510489 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 140

Conread position: 45-213
Cow position: chr12:25820661-25820491 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 41

Conread position: 45-319
Cow position: chr12:3906240-3906509 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 163

Conread position: 45-347
Cow position: chr12:29995689-29995400 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 47

Conread position: 45-356
Cow position: chr12:19691464-19691161 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 237, 30

Conread position: 45-382
Cow position: chr12:11109541-11109853 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 32

Conread position: 45-402
Cow position: chr12:45820591-45820247 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 96

Conread position: 45-422
Cow position: chr12:28748706-28749080 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 64

Conread position: 45-488
Cow position: chr12:18421155-18420717 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 297
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 129

Conread position: 45-531
Cow position: chr12:4008509-4008039 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 298
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 140

Conread position: 46-256
Cow position: chr12:6164256-6164051 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 151

Conread position: 46-347
Cow position: chr12:8869107-8868818 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 160, 0

Conread position: 46-363
Cow position: chr12:30210252-30210563 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 7

Conread position: 46-381
Cow position: chr12:32714815-32715142 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 186, 34

Conread position: 46-415
Cow position: chr12:15763137-15762782 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 31

Conread position: 46-478
Cow position: chr12:18103821-18103423 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 53

Conread position: 47-178
Cow position: chr12:16310203-16310338 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 48-202
Cow position: chr12:18021368-18021522 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 29, 44

Conread position: 48-217
Cow position: chr12:44559361-44559528 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 48-222
Cow position: chr12:38512067-38511895 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 29

Conread position: 48-451
Cow position: chr12:4596224-4596634 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 29, 164

Conread position: 50-470
Cow position: chr12:33129041-33129435 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 70

Conread position: 51-267
Cow position: chr12:4116271-4116471 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 51-400
Cow position: chr12:22881825-22882168 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 29

Conread position: 53-425
Cow position: chr12:36544869-36544506 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 184, 24

Conread position: 53-459
Cow position: chr12:17031395-17031781 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 155, 26

Conread position: 57-422
Cow position: chr12:25917483-25917140 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 94

Conread position: 58-430
Cow position: chr12:33851140-33851500 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 104

Conread position: 59-361
Cow position: chr12:22539987-22540285 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 36

Conread position: 60-422
Cow position: chr12:9710421-9710069 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 17

Conread position: 61-463
Cow position: chr12:13643020-13643416 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 76

Conread position: 69-417
Cow position: chr12:18518458-18518803 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 69-432
Cow position: chr12:30194501-30194839 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 23

Conread position: 69-461
Cow position: chr12:44622146-44622535 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 128

Conread position: 70-319
Cow position: chr12:34673547-34673304 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 64

Conread position: 71-451
Cow position: chr12:33975998-33976364 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 25

Conread position: 73-215
Cow position: chr12:5638941-5639083 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 7

Conread position: 75-202
Cow position: chr12:22261025-22260897 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 75-227
Cow position: chr12:3039304-3039457 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 26

Conread position: 75-451
Cow position: chr12:42879496-42879864 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 22

Conread position: 75-461
Cow position: chr12:34473822-34473433 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 290, 21

Conread position: 76-202
Cow position: chr12:29694247-29694120 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 27

Conread position: 76-217
Cow position: chr12:2805244-2805109 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 76-356
Cow position: chr12:31429770-31429498 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 164, 128

Conread position: 78-432
Cow position: chr12:46714171-46714523 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 121

Conread position: 79-188
Cow position: chr12:32334205-32334095 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 80-193
Cow position: chr12:31882152-31882264 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 80-278
Cow position: chr12:2670067-2670259 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 134

Conread position: 80-370
Cow position: chr12:7977846-7978124 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 88

Conread position: 80-425
Cow position: chr12:11836037-11836369 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 70

Conread position: 80-432
Cow position: chr12:4768730-4769065 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 105

Conread position: 80-473
Cow position: chr12:25280689-25280314 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 169, 48

Conread position: 85-412
Cow position: chr12:7299659-7299335 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 126

Conread position: 85-415
Cow position: chr12:11587576-11587900 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 115

Conread position: 86-200
Cow position: chr12:7191452-7191337 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 56

Conread position: 86-314
Cow position: chr12:28582692-28582477 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 91-432
Cow position: chr12:12637373-12637039 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 116

Conread position: 91-432
Cow position: chr12:28131399-28131739 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 77

Conread position: 93-324
Cow position: chr12:10491089-10491312 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 64

Conread position: 93-355
Cow position: chr12:23855652-23855904 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 108

Conread position: 93-381
Cow position: chr12:7000788-7000507 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 114

Conread position: 93-417
Cow position: chr12:15050798-15050491 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 12

Conread position: 93-432
Cow position: chr12:30919237-30919580 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 26

Conread position: 93-454
Cow position: chr12:42685130-42684771 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 174, 111

Conread position: 97-378
Cow position: chr12:24206976-24207269 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 159

Conread position: 98-415
Cow position: chr12:35123714-35124021 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 21, 56

Conread position: 98-431
Cow position: chr12:15122142-15122470 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 108

Conread position: 99-425
Cow position: chr12:4719768-4720083 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 84

Conread position: 99-428
Cow position: chr12:15415050-15414728 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 147, 115

Conread position: 99-431
Cow position: chr12:1998977-1998653 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 51

Conread position: 99-462
Cow position: chr12:23916665-23917017 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 116

Conread position: 100-432
Cow position: chr12:15703673-15703349 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 105, 47

Conread position: 101-381
Cow position: chr12:44919859-44920126 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 102-419
Cow position: chr12:20636333-20636017 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 143

Conread position: 103-361
Cow position: chr12:42233883-42234137 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 30

Conread position: 106-432
Cow position: chr12:11546860-11547187 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 23

Conread position: 110-490
Cow position: chr12:42784141-42784506 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 86

Conread position: 111-409
Cow position: chr12:15103099-15103400 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 151

Conread position: 114-356
Cow position: chr12:41216046-41215812 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 214, 92

Conread position: 114-478
Cow position: chr12:40360524-40360880 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 234
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 16

Conread position: 115-458
Cow position: chr12:37170104-37169776 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 67

Conread position: 119-461
Cow position: chr12:23446566-23446892 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 131, 9

Conread position: 120-423
Cow position: chr12:6102983-6102690 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 87

Conread position: 120-424
Cow position: chr12:15783767-15784062 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 120-425
Cow position: chr12:3623539-3623830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 8

Conread position: 120-432
Cow position: chr12:25027928-25027610 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 88

Conread position: 121-415
Cow position: chr12:13988216-13988503 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 247, 74

Conread position: 122-430
Cow position: chr12:33141637-33141945 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 73

Conread position: 128-374
Cow position: chr12:15173677-15173914 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 117, 58

Conread position: 128-416
Cow position: chr12:19258131-19258409 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 104, 75

Conread position: 128-451
Cow position: chr12:37008853-37008544 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 208
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 79

Conread position: 129-381
Cow position: chr12:45090505-45090252 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 80

Conread position: 129-424
Cow position: chr12:41658870-41658583 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 75

Conread position: 129-488
Cow position: chr12:16670118-16670471 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 108, 75

Conread position: 130-361
Cow position: chr12:24116510-24116285 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 77

Conread position: 130-483
Cow position: chr12:9767020-9766688 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 157, 17

Conread position: 131-413
Cow position: chr12:3372004-3371733 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 109, 73

Conread position: 131-422
Cow position: chr12:43560296-43560006 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 143, 64

Conread position: 132-417
Cow position: chr12:24032357-24032622 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 39

Conread position: 133-363
Cow position: chr12:15699931-15700160 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 26

Conread position: 140-470
Cow position: chr12:29675273-29674957 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 137, 21

Conread position: 140-471
Cow position: chr12:38216175-38215845 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 71

Conread position: 144-511
Cow position: chr12:10942153-10942522 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 62

Conread position: 147-478
Cow position: chr12:24152208-24152528 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 68

Conread position: 148-408
Cow position: chr12:26750088-26749827 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 62

Conread position: 148-468
Cow position: chr12:9129770-9130081 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 66, 25

Conread position: 151-418
Cow position: chr12:16056985-16056723 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 53

Conread position: 151-432
Cow position: chr12:26575761-26576038 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 200

Conread position: 151-470
Cow position: chr12:17269674-17269984 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 106, 53

Conread position: 151-479
Cow position: chr12:7884807-7884488 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 53

Conread position: 152-458
Cow position: chr12:14222852-14223157 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 122, 52

Conread position: 152-458
Cow position: chr12:19261074-19261363 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 29

Conread position: 153-393
Cow position: chr12:24222641-24222412 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 155-422
Cow position: chr12:38126648-38126385 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 49

Conread position: 155-462
Cow position: chr12:18563028-18563340 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 96

Conread position: 160-432
Cow position: chr12:31269034-31269304 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 47

Conread position: 163-432
Cow position: chr12:35241214-35240957 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 110, 10

Conread position: 165-417
Cow position: chr12:18583104-18582865 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 65

Conread position: 169-400
Cow position: chr12:5609618-5609395 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 169, 34

Conread position: 177-469
Cow position: chr12:37514382-37514103 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 29

Conread position: 184-432
Cow position: chr12:42749348-42749589 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 25

Conread position: 198-422
Cow position: chr12:9514275-9514504 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 7

Conread position: 200-454
Cow position: chr12:16493448-16493191 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 48

Conread position: 203-470
Cow position: chr12:27176552-27176818 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 43

Conread position: 207-414
Cow position: chr12:7457621-7457412 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 39

Conread position: 208-470
Cow position: chr12:27192447-27192186 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 38

Conread position: 209-417
Cow position: chr12:21780086-21780295 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 75

Conread position: 209-458
Cow position: chr12:17252272-17252035 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 10

Conread position: 209-463
Cow position: chr12:40158097-40157850 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 14

Conread position: 212-463
Cow position: chr12:12232810-12233054 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 62

Conread position: 215-490
Cow position: chr12:25343711-25343984 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 67

Conread position: 216-458
Cow position: chr12:20404077-20404319 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 212

Conread position: 217-432
Cow position: chr12:6206264-6206480 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 94

Conread position: 217-462
Cow position: chr12:6188182-6187937 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 29

Conread position: 219-454
Cow position: chr12:40200635-40200860 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 27

Conread position: 219-462
Cow position: chr12:15495832-15496070 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 27

Conread position: 219-468
Cow position: chr12:18123603-18123849 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 40

Conread position: 223-432
Cow position: chr12:36261627-36261840 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 61

Conread position: 223-458
Cow position: chr12:38155133-38154900 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 51

Conread position: 228-476
Cow position: chr12:43974236-43974484 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 208, 46

Conread position: 237-431
Cow position: chr12:12532539-12532346 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 105

Conread position: 238-417
Cow position: chr12:26147216-26147037 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 7

Conread position: 239-432
Cow position: chr12:14986704-14986893 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 6

Conread position: 242-505
Cow position: chr12:26357413-26357157 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 41

Conread position: 250-458
Cow position: chr12:37123616-37123820 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 104

Conread position: 250-488
Cow position: chr12:16386490-16386257 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 32

Conread position: 258-462
Cow position: chr12:42951711-42951519 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 262-409
Cow position: chr12:11230212-11230361 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 263-416
Cow position: chr12:24397183-24397032 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 19

Conread position: 263-432
Cow position: chr12:35136897-35137067 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 264-432
Cow position: chr12:22047903-22048070 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 270-474
Cow position: chr12:41684496-41684687 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 279-432
Cow position: chr12:1089397-1089244 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 20

Conread position: 279-432
Cow position: chr12:3057083-3057235 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 279-459
Cow position: chr12:43619276-43619455 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 139

Conread position: 280-420
Cow position: chr12:20356813-20356672 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 280-469
Cow position: chr12:34877827-34878016 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 152

Conread position: 281-417
Cow position: chr12:11106583-11106447 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 281-431
Cow position: chr12:43854891-43855035 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 281-434
Cow position: chr12:31841567-31841718 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 281-468
Cow position: chr12:39150054-39149865 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 281-469
Cow position: chr12:43474758-43474943 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 153, 92

Conread position: 282-473
Cow position: chr12:12699642-12699455 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 154, 0

Conread position: 282-495
Cow position: chr12:2964046-2964257 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 154, 91

Conread position: 283-455
Cow position: chr12:6426896-6427064 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 12

Conread position: 283-467
Cow position: chr12:17490215-17490394 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 37

Conread position: 286-402
Cow position: chr12:26868811-26868695 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 288-434
Cow position: chr12:24532620-24532474 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 292-461
Cow position: chr12:24437626-24437456 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 292-462
Cow position: chr12:13995789-13995622 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 128

Conread position: 292-490
Cow position: chr12:39282696-39282505 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 295-434
Cow position: chr12:37718759-37718620 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-434
Cow position: chr12:37742310-37742449 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 296-432
Cow position: chr12:44892220-44892355 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 296-473
Cow position: chr12:27663980-27663803 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 308-434
Cow position: chr12:25299384-25299509 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 339-463
Cow position: chr12:6719443-6719563 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 448-612
Cow position: chr12:11081133-11080972 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 448-626
Cow position: chr12:16850950-16850771 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 127

Conread position: 456-644
Cow position: chr12:36109289-36109101 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 49

Conread position: 460-640
Cow position: chr12:43671680-43671860 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 52

Conread position: 462-612
Cow position: chr12:25606684-25606834 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 112

Conread position: 462-633
Cow position: chr12:12331531-12331364 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 463-641
Cow position: chr12:40931632-40931460 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 467-610
Cow position: chr12:24681803-24681944 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 468-610
Cow position: chr12:24559343-24559484 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 468-610
Cow position: chr12:27365913-27366051 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 468-610
Cow position: chr12:30596452-30596594 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 46

Conread position: 468-612
Cow position: chr12:9229515-9229370 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 468-612
Cow position: chr12:39781354-39781213 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 468-614
Cow position: chr12:32413501-32413647 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 36

Conread position: 468-625
Cow position: chr12:25933670-25933824 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 44

Conread position: 468-626
Cow position: chr12:5680668-5680828 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 145, 105

Conread position: 468-632
Cow position: chr12:42477995-42478160 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 144, 88

Conread position: 468-641
Cow position: chr12:10763242-10763425 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 85, 112

Conread position: 468-641
Cow position: chr12:31198752-31198923 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 154, 105

Conread position: 469-613
Cow position: chr12:30413961-30413811 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 116

Conread position: 469-620
Cow position: chr12:8981067-8980920 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 471-626
Cow position: chr12:44908004-44908158 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 143, 10

Conread position: 472-626
Cow position: chr12:4801355-4801516 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 108

Conread position: 472-637
Cow position: chr12:47486822-47486985 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 473-611
Cow position: chr12:44438593-44438445 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 474-612
Cow position: chr12:33458138-33458267 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 475-611
Cow position: chr12:11520165-11520299 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 475-626
Cow position: chr12:27055598-27055747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 475-626
Cow position: chr12:28017038-28017188 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 37

Conread position: 475-626
Cow position: chr12:32264413-32264261 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 98

Conread position: 475-634
Cow position: chr12:3816473-3816636 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 103

Conread position: 511-643
Cow position: chr12:38096150-38096284 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 63

Show alignments to all cow chromosomes.