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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0025o19.5
        

               
Conread position:
               
15-202
               

               
Cow position:
               
chr17:21298044-21298237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chr17:40792049-40792225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr17:484439-484601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr17:31701273-31701640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
32-217
               

               
Cow position:
               
chr17:10491360-10491545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
32-478
               

               
Cow position:
               
chr17:28467974-28468394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
300, 45
               

               
Conread position:
               
33-297
               

               
Cow position:
               
chr17:10020960-10020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 176
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr17:27047998-27048313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
33-432
               

               
Cow position:
               
chr17:16446593-16446201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
33-445
               

               
Cow position:
               
chr17:5423234-5422840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
33-481
               

               
Cow position:
               
chr17:9966193-9965748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
35-319
               

               
Cow position:
               
chr17:923719-923994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
35-432
               

               
Cow position:
               
chr17:11962708-11962309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
36-233
               

               
Cow position:
               
chr17:7648062-7648253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
36-250
               

               
Cow position:
               
chr17:42347379-42347180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr17:4967953-4968241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
37-417
               

               
Cow position:
               
chr17:30529694-30529340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
38-159
               

               
Cow position:
               
chr17:16117584-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-170
               

               
Cow position:
               
chr17:3442824-3442695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr17:33052707-33052842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr17:3182741-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr17:3498820-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr17:20928754-20928898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr17:27142600-27142743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr17:32554182-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
38-186
               

               
Cow position:
               
chr17:966895-966749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr17:21710349-21710502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr17:34316865-34316713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr17:242480-242636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr17:5380810-5380969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr17:21419276-21419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
38-197
               

               
Cow position:
               
chr17:21031629-21031783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr17:9778095-9778250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:3471265-3471424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:5041832-5041678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:9565153-9565311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:10446760-10446922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:23337169-23337013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr17:24761382-24761224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr17:20839717-20839556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:8279865-8279703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:15067782-15067622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:15333867-15333707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:20126457-20126618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:21363251-21363411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:21697576-21697742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:22032850-22032685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:29292523-29292361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:33999200-33999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:35184879-35185046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:35311265-35311432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:38613090-38613252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:41892224-41892060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr17:44232875-44232709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-204
               

               
Cow position:
               
chr17:1526514-1526347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr17:32651460-32651630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-211
               

               
Cow position:
               
chr17:5896067-5895896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr17:8690596-8690428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr17:33926281-33926111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr17:41290174-41290007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr17:4436387-4436216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr17:22781531-22781708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr17:38200921-38200745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
38-215
               

               
Cow position:
               
chr17:4601704-4601527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr17:13143846-13143671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr17:24550013-24550196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
8, 171
               

               
Conread position:
               
38-218
               

               
Cow position:
               
chr17:38363130-38362964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 31
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr17:25141304-25141472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
38-227
               

               
Cow position:
               
chr17:21874472-21874276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
38-231
               

               
Cow position:
               
chr17:31232086-31231899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
38-250
               

               
Cow position:
               
chr17:20870255-20870054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr17:18884505-18884283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 172
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr17:34207976-34207765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr17:26881493-26881271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
38-309
               

               
Cow position:
               
chr17:27549984-27549724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
218, 100
               

               
Conread position:
               
38-314
               

               
Cow position:
               
chr17:3781889-3782153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
38-318
               

               
Cow position:
               
chr17:21918030-21917759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
38-318
               

               
Cow position:
               
chr17:38646908-38647175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
219, 39
               

               
Conread position:
               
38-332
               

               
Cow position:
               
chr17:3503430-3503709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
38-355
               

               
Cow position:
               
chr17:7760619-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
38-356
               

               
Cow position:
               
chr17:11156649-11156342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
38-356
               

               
Cow position:
               
chr17:30718575-30718266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr17:11832295-11831958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
38-362
               

               
Cow position:
               
chr17:20990350-20990032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr17:979309-979008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr17:21243943-21243631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr17:21680612-21680938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr17:23246054-23246357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
38-365
               

               
Cow position:
               
chr17:43141872-43141548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr17:9746362-9746674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr17:12220094-12219777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
38-370
               

               
Cow position:
               
chr17:17405982-17406301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr17:37482235-37481904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr17:40289160-40288831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr17:9117487-9117821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr17:22564027-22564361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr17:25796496-25796156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr17:40331609-40331941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
38-388
               

               
Cow position:
               
chr17:21335854-21335508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr17:1493312-1492951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr17:7697897-7698256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr17:18860875-18860537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr17:25097306-25097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr17:32989336-32989677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
221, 25
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr17:32993770-32993423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 29
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr17:28285184-28284827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr17:2810465-2810842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr17:4612233-4611852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr17:15188237-15187859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr17:12108647-12109018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr17:21973289-21972917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 39
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr17:36790983-36791337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
38-418
               

               
Cow position:
               
chr17:10459092-10458723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
219, 35
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr17:4106142-4105774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
244, 39
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr17:4121878-4121509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
244, 39
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr17:9697858-9697466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 210
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr17:1256660-1256283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr17:25189123-25189506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr17:23063556-23063939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr17:6566315-6566702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr17:21434885-21434508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
38-430
               

               
Cow position:
               
chr17:4225647-4225263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr17:1562930-1562567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
293, 144
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr17:12929699-12929304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 174
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr17:20993195-20992814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr17:33275902-33275535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr17:34079254-34078886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:5514599-5514982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:10528897-10528505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:11664747-11664352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:11839542-11839948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:14033800-14033416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:18419516-18419910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:20093283-20092904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
201, 37
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:23101367-23100997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:24883724-24883345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:25901039-25901433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 24
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:25999960-26000344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:26230783-26231190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:39771240-39771627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:40771674-40772055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr17:44147132-44146748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr17:1035757-1035367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr17:7142708-7143084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr17:24587462-24587850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
38-437
               

               
Cow position:
               
chr17:32471950-32471558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr17:20072231-20071871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr17:36331123-36330735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
38-451
               

               
Cow position:
               
chr17:12536624-12536231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
234, 40
               

               
Conread position:
               
38-454
               

               
Cow position:
               
chr17:20033072-20032665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 172
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr17:11101950-11101567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
398, 42
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr17:908590-908988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr17:20157459-20157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
249, 31
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr17:21293200-21292788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr17:13922319-13922733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr17:31481201-31480779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
38-463
               

               
Cow position:
               
chr17:12447555-12447150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
38-465
               

               
Cow position:
               
chr17:40741491-40741915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-468
               

               
Cow position:
               
chr17:18146026-18146449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
38-469
               

               
Cow position:
               
chr17:20800660-20801072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
38-471
               

               
Cow position:
               
chr17:21959839-21959416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
38-474
               

               
Cow position:
               
chr17:20848374-20848791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
38-475
               

               
Cow position:
               
chr17:25611937-25612353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
234, 41
               

               
Conread position:
               
38-476
               

               
Cow position:
               
chr17:12289571-12289145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 39
               

               
Conread position:
               
38-478
               

               
Cow position:
               
chr17:20780354-20780793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
38-480
               

               
Cow position:
               
chr17:27058709-27058279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
38-490
               

               
Cow position:
               
chr17:12306552-12306114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
38-637
               

               
Cow position:
               
chr17:15103044-15102468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
39-170
               

               
Cow position:
               
chr17:25078152-25078028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
39-191
               

               
Cow position:
               
chr17:37163682-37163526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
39-193
               

               
Cow position:
               
chr17:10037288-10037436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
39-195
               

               
Cow position:
               
chr17:14088482-14088326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
39-198
               

               
Cow position:
               
chr17:6624103-6624258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr17:27819145-27819308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
39-211
               

               
Cow position:
               
chr17:26224362-26224526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
39-219
               

               
Cow position:
               
chr17:11056529-11056349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr17:26183067-26183248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
39-225
               

               
Cow position:
               
chr17:11386359-11386544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr17:32950117-32950325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
39-349
               

               
Cow position:
               
chr17:5006642-5006343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr17:5900223-5900531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
212, 30
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr17:24821711-24822035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
218, 38
               

               
Conread position:
               
39-384
               

               
Cow position:
               
chr17:8544151-8544479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-409
               

               
Cow position:
               
chr17:24077246-24077598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
39-423
               

               
Cow position:
               
chr17:24490366-24490760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 253
               

               
Conread position:
               
39-430
               

               
Cow position:
               
chr17:11281262-11280866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
39-431
               

               
Cow position:
               
chr17:27429423-27429780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr17:9853831-9854207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr17:11296480-11296864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 209
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr17:13940477-13940093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr17:27795492-27795880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
39-435
               

               
Cow position:
               
chr17:1063034-1063399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
39-459
               

               
Cow position:
               
chr17:32027617-32027199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 169
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr17:16371096-16371514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 167
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr17:32279062-32278648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
39-463
               

               
Cow position:
               
chr17:25815454-25815848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
212, 27
               

               
Conread position:
               
39-469
               

               
Cow position:
               
chr17:7132610-7132160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 235
               

               
Conread position:
               
39-472
               

               
Cow position:
               
chr17:38614801-38615227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
39-485
               

               
Cow position:
               
chr17:29472320-29472738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr17:13244186-13243768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
201, 30
               

               
Conread position:
               
40-178
               

               
Cow position:
               
chr17:31585272-31585414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-179
               

               
Cow position:
               
chr17:43717467-43717332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr17:20835439-20835589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-200
               

               
Cow position:
               
chr17:24580454-24580293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-202
               

               
Cow position:
               
chr17:1295725-1295564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-202
               

               
Cow position:
               
chr17:5246741-5246897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr17:30539401-30539238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
40-213
               

               
Cow position:
               
chr17:40892995-40893165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
40-213
               

               
Cow position:
               
chr17:41029799-41029970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
40-222
               

               
Cow position:
               
chr17:12059245-12059070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-259
               

               
Cow position:
               
chr17:27679398-27679184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 145
               

               
Conread position:
               
40-314
               

               
Cow position:
               
chr17:14762273-14762012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
40-318
               

               
Cow position:
               
chr17:10473674-10473961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 231
               

               
Conread position:
               
40-349
               

               
Cow position:
               
chr17:18592286-18592587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
40-356
               

               
Cow position:
               
chr17:12591009-12591326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
40-361
               

               
Cow position:
               
chr17:9911611-9911914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr17:8079160-8079489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
235, 164
               

               
Conread position:
               
40-395
               

               
Cow position:
               
chr17:20932175-20932521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
40-415
               

               
Cow position:
               
chr17:24149023-24149395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
40-417
               

               
Cow position:
               
chr17:8837103-8836738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
242, 35
               

               
Conread position:
               
40-422
               

               
Cow position:
               
chr17:37857881-37857474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr17:4786650-4786256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
197, 29
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr17:11618426-11618812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr17:17410139-17410525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr17:24559145-24559518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
40-434
               

               
Cow position:
               
chr17:21115102-21114728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
217, 19
               

               
Conread position:
               
40-469
               

               
Cow position:
               
chr17:21739038-21738605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
40-470
               

               
Cow position:
               
chr17:3467615-3468008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
241, 38
               

               
Conread position:
               
40-470
               

               
Cow position:
               
chr17:5280797-5280386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
40-477
               

               
Cow position:
               
chr17:15664515-15664945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr17:11171642-11171808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
41-380
               

               
Cow position:
               
chr17:32273837-32273511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
41-417
               

               
Cow position:
               
chr17:11278186-11277816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
41-417
               

               
Cow position:
               
chr17:34650289-34650673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 211
               

               
Conread position:
               
41-421
               

               
Cow position:
               
chr17:21414992-21414613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
41-421
               

               
Cow position:
               
chr17:21437475-21437096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
41-432
               

               
Cow position:
               
chr17:32419271-32418892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
41-463
               

               
Cow position:
               
chr17:24973798-24974195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:3306715-3306872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:4824342-4824501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:21017642-21017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:21207287-21207128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:25168158-25168320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
42-210
               

               
Cow position:
               
chr17:267736-267572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
42-212
               

               
Cow position:
               
chr17:27306006-27306173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
42-221
               

               
Cow position:
               
chr17:12216229-12216046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
42-247
               

               
Cow position:
               
chr17:10510814-10510609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
42-362
               

               
Cow position:
               
chr17:21495222-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr17:34595787-34596101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
42-376
               

               
Cow position:
               
chr17:1410395-1410065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
42-378
               

               
Cow position:
               
chr17:21755593-21755260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
42-388
               

               
Cow position:
               
chr17:1061214-1060865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
42-407
               

               
Cow position:
               
chr17:18109238-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
42-409
               

               
Cow position:
               
chr17:30665120-30665474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
42-421
               

               
Cow position:
               
chr17:24824100-24824463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
242, 35
               

               
Conread position:
               
42-425
               

               
Cow position:
               
chr17:31037532-31037158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
42-431
               

               
Cow position:
               
chr17:24787173-24786801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr17:7437014-7437396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr17:34948489-34948862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
42-451
               

               
Cow position:
               
chr17:21003983-21003591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
42-454
               

               
Cow position:
               
chr17:25128502-25128106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
42-455
               

               
Cow position:
               
chr17:1783761-1783377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
42-466
               

               
Cow position:
               
chr17:30713194-30713601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr17:33288806-33288240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
45-200
               

               
Cow position:
               
chr17:5382135-5381989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr17:21312954-21312805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-310
               

               
Cow position:
               
chr17:25541962-25541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
191, 32
               

               
Conread position:
               
45-362
               

               
Cow position:
               
chr17:26764864-26765181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
45-372
               

               
Cow position:
               
chr17:29157269-29157584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr17:24553855-24554170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr17:45881751-45882105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
45-432
               

               
Cow position:
               
chr17:20022666-20022289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
45-462
               

               
Cow position:
               
chr17:36203639-36203229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
45-465
               

               
Cow position:
               
chr17:17222193-17222597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
45-469
               

               
Cow position:
               
chr17:12946514-12946103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
45-470
               

               
Cow position:
               
chr17:3577389-3577790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
46-213
               

               
Cow position:
               
chr17:33121943-33122111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr17:1275372-1275633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
46-317
               

               
Cow position:
               
chr17:21628334-21628591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
46-412
               

               
Cow position:
               
chr17:14003669-14004023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
46-462
               

               
Cow position:
               
chr17:25117742-25118138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
46-464
               

               
Cow position:
               
chr17:1634633-1634243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
213, 32
               

               
Conread position:
               
47-196
               

               
Cow position:
               
chr17:27667341-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
47-217
               

               
Cow position:
               
chr17:5144314-5144144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
47-422
               

               
Cow position:
               
chr17:6328961-6329327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
48-425
               

               
Cow position:
               
chr17:39412646-39412286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
207, 30
               

               
Conread position:
               
52-217
               

               
Cow position:
               
chr17:33271829-33271661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
52-251
               

               
Cow position:
               
chr17:34834362-34834169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
53-476
               

               
Cow position:
               
chr17:24928338-24928751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
54-202
               

               
Cow position:
               
chr17:31231255-31231109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
54-462
               

               
Cow position:
               
chr17:17179892-17180303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
60-306
               

               
Cow position:
               
chr17:35126576-35126812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
209, 18
               

               
Conread position:
               
60-425
               

               
Cow position:
               
chr17:14026054-14025689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
60-431
               

               
Cow position:
               
chr17:11362043-11362400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
60-461
               

               
Cow position:
               
chr17:32280531-32280924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
61-257
               

               
Cow position:
               
chr17:11921415-11921223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
61-432
               

               
Cow position:
               
chr17:6423624-6423979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
64-389
               

               
Cow position:
               
chr17:33411156-33410825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
64-422
               

               
Cow position:
               
chr17:1113755-1114113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
65-478
               

               
Cow position:
               
chr17:6318990-6318603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
69-505
               

               
Cow position:
               
chr17:18720582-18720155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr17:14060900-14060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr17:20874266-20874572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 142
               

               
Conread position:
               
74-402
               

               
Cow position:
               
chr17:18495642-18495324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 16
               

               
Conread position:
               
74-408
               

               
Cow position:
               
chr17:29080430-29080742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
74-415
               

               
Cow position:
               
chr17:42419600-42419918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
74-451
               

               
Cow position:
               
chr17:11216014-11215653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
301, 129
               

               
Conread position:
               
75-211
               

               
Cow position:
               
chr17:30734414-30734279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
75-368
               

               
Cow position:
               
chr17:39736059-39736336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
75-432
               

               
Cow position:
               
chr17:27184066-27183717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
75-432
               

               
Cow position:
               
chr17:32138536-32138191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
76-217
               

               
Cow position:
               
chr17:28539908-28540049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr17:39857272-39857544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
76-463
               

               
Cow position:
               
chr17:20884402-20884785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 130
               

               
Conread position:
               
79-215
               

               
Cow position:
               
chr17:43633994-43634127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
80-363
               

               
Cow position:
               
chr17:6848688-6848953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
80-413
               

               
Cow position:
               
chr17:25594820-25594488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
80-432
               

               
Cow position:
               
chr17:32348957-32349288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
80-458
               

               
Cow position:
               
chr17:7803288-7802924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
81-311
               

               
Cow position:
               
chr17:7654568-7654345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
81-417
               

               
Cow position:
               
chr17:37699472-37699130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
82-202
               

               
Cow position:
               
chr17:25122523-25122402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr17:25501995-25502267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
83-432
               

               
Cow position:
               
chr17:21325221-21325569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
85-211
               

               
Cow position:
               
chr17:14883196-14883069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
85-325
               

               
Cow position:
               
chr17:23798170-23798402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
176, 10
               

               
Conread position:
               
85-379
               

               
Cow position:
               
chr17:11215341-11215056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
86-350
               

               
Cow position:
               
chr17:1040635-1040890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 117
               

               
Conread position:
               
88-216
               

               
Cow position:
               
chr17:9936146-9936018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
89-212
               

               
Cow position:
               
chr17:2839800-2839922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
92-366
               

               
Cow position:
               
chr17:33658175-33657907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
165, 112
               

               
Conread position:
               
92-395
               

               
Cow position:
               
chr17:35339020-35338726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
259, 101
               

               
Conread position:
               
93-201
               

               
Cow position:
               
chr17:17266998-17266889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
93-381
               

               
Cow position:
               
chr17:15340856-15340575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
191, 70
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr17:33933852-33933508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 111
               

               
Conread position:
               
93-478
               

               
Cow position:
               
chr17:18201655-18202032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr17:10561527-10561786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
172, 109
               

               
Conread position:
               
96-407
               

               
Cow position:
               
chr17:14652881-14652576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
98-478
               

               
Cow position:
               
chr17:11912596-11912236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
175, 49
               

               
Conread position:
               
99-455
               

               
Cow position:
               
chr17:25514221-25513869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
253, 120
               

               
Conread position:
               
102-373
               

               
Cow position:
               
chr17:23517037-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
164, 94
               

               
Conread position:
               
102-381
               

               
Cow position:
               
chr17:27203139-27202871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
105-400
               

               
Cow position:
               
chr17:21489716-21489432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
110-432
               

               
Cow position:
               
chr17:25342827-25342515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
112-461
               

               
Cow position:
               
chr17:22127843-22128179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr17:1466511-1466194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
117-475
               

               
Cow position:
               
chr17:1469298-1469636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
120-430
               

               
Cow position:
               
chr17:8598182-8597886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
112, 84
               

               
Conread position:
               
120-431
               

               
Cow position:
               
chr17:5350195-5349899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
120-431
               

               
Cow position:
               
chr17:29025990-29026299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
122-382
               

               
Cow position:
               
chr17:12880526-12880772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
123-417
               

               
Cow position:
               
chr17:27730466-27730756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
124-425
               

               
Cow position:
               
chr17:40638877-40639165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
250, 72
               

               
Conread position:
               
124-479
               

               
Cow position:
               
chr17:36814287-36814633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
128-461
               

               
Cow position:
               
chr17:21806518-21806199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr17:36864562-36864883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
129-434
               

               
Cow position:
               
chr17:11995099-11994793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
129-462
               

               
Cow position:
               
chr17:34791134-34790814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
155, 75
               

               
Conread position:
               
130-451
               

               
Cow position:
               
chr17:9824602-9824907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
131-420
               

               
Cow position:
               
chr17:24750851-24751130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
134-432
               

               
Cow position:
               
chr17:40694502-40694208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 96
               

               
Conread position:
               
134-462
               

               
Cow position:
               
chr17:25709641-25709966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
140-463
               

               
Cow position:
               
chr17:9770454-9770757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr17:30749976-30750273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
151-412
               

               
Cow position:
               
chr17:39606384-39606630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
151-431
               

               
Cow position:
               
chr17:22051638-22051367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
151-432
               

               
Cow position:
               
chr17:26757508-26757219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
152-470
               

               
Cow position:
               
chr17:33155200-33154899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
153-432
               

               
Cow position:
               
chr17:5372573-5372307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
154-432
               

               
Cow position:
               
chr17:949932-950200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
154-468
               

               
Cow position:
               
chr17:25800925-25800629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
155-432
               

               
Cow position:
               
chr17:26789378-26789640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
155-462
               

               
Cow position:
               
chr17:25466925-25467243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
158-432
               

               
Cow position:
               
chr17:28982140-28982402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
159-462
               

               
Cow position:
               
chr17:17044371-17044080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
159-473
               

               
Cow position:
               
chr17:18818530-18818827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
162-422
               

               
Cow position:
               
chr17:25885787-25886047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 5
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr17:28814533-28814337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr17:9940649-9940904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
164-458
               

               
Cow position:
               
chr17:35149561-35149275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
164-464
               

               
Cow position:
               
chr17:32333125-32332834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
272, 45
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr17:40276706-40276950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
174-432
               

               
Cow position:
               
chr17:25584216-25584469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
176-462
               

               
Cow position:
               
chr17:7571078-7571360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
194-432
               

               
Cow position:
               
chr17:7810771-7810522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
204-408
               

               
Cow position:
               
chr17:27440176-27440374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr17:1463330-1463104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
208-467
               

               
Cow position:
               
chr17:32143091-32143344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chr17:12325763-12325526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chr17:31559571-31559811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
209-461
               

               
Cow position:
               
chr17:12959107-12959358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
210-432
               

               
Cow position:
               
chr17:3153571-3153343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
210-432
               

               
Cow position:
               
chr17:4264229-4264451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
210-478
               

               
Cow position:
               
chr17:3388830-3389105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
211-423
               

               
Cow position:
               
chr17:10023060-10023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
211-470
               

               
Cow position:
               
chr17:21039562-21039817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
212-431
               

               
Cow position:
               
chr17:5013069-5012844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr17:40355268-40355485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr17:15354941-15355177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 213
               

               
Conread position:
               
219-415
               

               
Cow position:
               
chr17:45296428-45296616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
219-431
               

               
Cow position:
               
chr17:26072748-26072534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
219-432
               

               
Cow position:
               
chr17:24862471-24862680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
219-432
               

               
Cow position:
               
chr17:40673383-40673598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
219-463
               

               
Cow position:
               
chr17:24841708-24841952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
219-470
               

               
Cow position:
               
chr17:9509982-9509735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
219-476
               

               
Cow position:
               
chr17:17034962-17035210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
219-478
               

               
Cow position:
               
chr17:5011851-5012110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 221
               

               
Conread position:
               
229-490
               

               
Cow position:
               
chr17:21718975-21718714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
230-451
               

               
Cow position:
               
chr17:27292432-27292214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
238-478
               

               
Cow position:
               
chr17:20929274-20929508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
241-459
               

               
Cow position:
               
chr17:10414533-10414745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
250-432
               

               
Cow position:
               
chr17:32220840-32220657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
263-431
               

               
Cow position:
               
chr17:19471712-19471549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr17:9078162-9077988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr17:28795924-28795755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr17:39963936-39964103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr17:42780266-42780094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr17:43957719-43957886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
263-434
               

               
Cow position:
               
chr17:31754716-31754545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
263-443
               

               
Cow position:
               
chr17:28528914-28529091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
263-459
               

               
Cow position:
               
chr17:25473221-25473028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
263-464
               

               
Cow position:
               
chr17:43323486-43323284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-466
               

               
Cow position:
               
chr17:1081263-1081462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-488
               

               
Cow position:
               
chr17:24895132-24895358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 159
               

               
Conread position:
               
264-473
               

               
Cow position:
               
chr17:6761788-6761593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
271-432
               

               
Cow position:
               
chr17:5762091-5761924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
276-470
               

               
Cow position:
               
chr17:21236594-21236790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr17:20359187-20359341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr17:25702676-25702829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-458
               

               
Cow position:
               
chr17:26183419-26183598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-465
               

               
Cow position:
               
chr17:15883746-15883930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 149
               

               
Conread position:
               
279-469
               

               
Cow position:
               
chr17:4817602-4817788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
280-410
               

               
Cow position:
               
chr17:8660271-8660400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
281-423
               

               
Cow position:
               
chr17:5048007-5048149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-425
               

               
Cow position:
               
chr17:17266058-17265912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
281-432
               

               
Cow position:
               
chr17:11921088-11920937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-432
               

               
Cow position:
               
chr17:21181528-21181679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-434
               

               
Cow position:
               
chr17:5344694-5344846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
91, 139
               

               
Conread position:
               
281-434
               

               
Cow position:
               
chr17:26225104-26225255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
281-439
               

               
Cow position:
               
chr17:25095558-25095718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
281-458
               

               
Cow position:
               
chr17:6767184-6767011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
281-461
               

               
Cow position:
               
chr17:8663581-8663761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
281-478
               

               
Cow position:
               
chr17:9260535-9260344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
283-470
               

               
Cow position:
               
chr17:3387796-3387980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
287-432
               

               
Cow position:
               
chr17:6787019-6787165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
287-458
               

               
Cow position:
               
chr17:10222127-10221960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
290-431
               

               
Cow position:
               
chr17:7864910-7865049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
290-485
               

               
Cow position:
               
chr17:14668588-14668779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
291-432
               

               
Cow position:
               
chr17:31736419-31736277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
298-432
               

               
Cow position:
               
chr17:18673946-18673812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
456-639
               

               
Cow position:
               
chr17:27809439-27809263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
462-607
               

               
Cow position:
               
chr17:33913517-33913373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
465-644
               

               
Cow position:
               
chr17:1525761-1525586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
468-601
               

               
Cow position:
               
chr17:19891688-19891819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
468-611
               

               
Cow position:
               
chr17:10314485-10314626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:1328662-1328803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:9927422-9927564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:13715970-13715829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:23147483-23147624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:24880804-24880946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr17:33925954-33925811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr17:10886345-10886192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr17:12342417-12342260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 87
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr17:31798384-31798226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
468-635
               

               
Cow position:
               
chr17:14278126-14278292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-642
               

               
Cow position:
               
chr17:11655441-11655614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-644
               

               
Cow position:
               
chr17:3620022-3619849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr17:7163831-7163650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr17:27505161-27505337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr17:10769447-10769273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 105
               

               
Conread position:
               
469-608
               

               
Cow position:
               
chr17:7614314-7614175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
469-639
               

               
Cow position:
               
chr17:30236261-30236423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
469-646
               

               
Cow position:
               
chr17:43284711-43284885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
470-611
               

               
Cow position:
               
chr17:5041344-5041201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
470-612
               

               
Cow position:
               
chr17:40815698-40815557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
472-612
               

               
Cow position:
               
chr17:14661476-14661340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
473-645
               

               
Cow position:
               
chr17:19239811-19239639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 81
               

               
Conread position:
               
475-600
               

               
Cow position:
               
chr17:12768737-12768613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
478-626
               

               
Cow position:
               
chr17:35387927-35387778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
481-612
               

               
Cow position:
               
chr17:5381028-5381157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
512-645
               

               
Cow position:
               
chr17:31465132-31464999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 15
               
Show alignments to all cow chromosomes.