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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0025o19.5
        

               
Conread position:
               
15-422
               

               
Cow position:
               
chr25:8157730-8157337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
26-202
               

               
Cow position:
               
chr25:22332551-22332727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr25:15566253-15566043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
33-439
               

               
Cow position:
               
chr25:2624601-2624983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
34-418
               

               
Cow position:
               
chr25:788064-788425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
35-367
               

               
Cow position:
               
chr25:10643512-10643189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
35-381
               

               
Cow position:
               
chr25:22531085-22531415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
35-417
               

               
Cow position:
               
chr25:12261099-12260719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
36-350
               

               
Cow position:
               
chr25:12778733-12778438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
36-368
               

               
Cow position:
               
chr25:26654705-26655028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
38-138
               

               
Cow position:
               
chr25:10330601-10330501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
38-178
               

               
Cow position:
               
chr25:20460924-20461065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
38-178
               

               
Cow position:
               
chr25:21266811-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr25:18448638-18448778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr25:21209147-21209012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr25:17712335-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
38-193
               

               
Cow position:
               
chr25:15319721-15319872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr25:10746701-10746853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr25:15286739-15286581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr25:61458-61620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr25:13642515-13642350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr25:20395003-20395153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:4002597-4002763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:6891718-6891564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:14467285-14467117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:25827263-25827431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:35625375-35625221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-202
               

               
Cow position:
               
chr25:40957186-40957025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
38-211
               

               
Cow position:
               
chr25:16001719-16001553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr25:26270133-26269967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr25:10365951-10365778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
38-215
               

               
Cow position:
               
chr25:6424787-6424613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
38-216
               

               
Cow position:
               
chr25:36026808-36026985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr25:12204271-12204447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr25:22297216-22297042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr25:23389481-23389302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
38-218
               

               
Cow position:
               
chr25:9396251-9396423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
38-220
               

               
Cow position:
               
chr25:12239347-12239167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
38-220
               

               
Cow position:
               
chr25:36535635-36535457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr25:24008376-24008192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr25:36033237-36033421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
38-238
               

               
Cow position:
               
chr25:8347310-8347500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr25:10137899-10138098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr25:36779293-36779505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr25:33691354-33691619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr25:16714473-16714205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
38-315
               

               
Cow position:
               
chr25:38425166-38425429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-324
               

               
Cow position:
               
chr25:37594215-37594483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
218, 37
               

               
Conread position:
               
38-334
               

               
Cow position:
               
chr25:15377134-15377413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
230, 28
               

               
Conread position:
               
38-337
               

               
Cow position:
               
chr25:20076298-20076586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
219, 39
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr25:11437001-11436706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
38-349
               

               
Cow position:
               
chr25:36036979-36036677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
38-359
               

               
Cow position:
               
chr25:34768919-34768622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
247, 39
               

               
Conread position:
               
38-362
               

               
Cow position:
               
chr25:12840917-12840603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
235, 28
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr25:20133514-20133199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr25:36761907-36762224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-368
               

               
Cow position:
               
chr25:21950927-21951251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
38-373
               

               
Cow position:
               
chr25:10218249-10217923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr25:26238672-26238992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
293, 39
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr25:28188148-28187816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr25:7581627-7581296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 165
               

               
Conread position:
               
38-380
               

               
Cow position:
               
chr25:3145641-3145978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr25:14196657-14196995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr25:15254530-15254214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-398
               

               
Cow position:
               
chr25:20069521-20069869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr25:8225898-8226257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr25:18988177-18988532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr25:40321492-40321135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr25:21245806-21245435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr25:20402919-20402542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr25:11662019-11661660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr25:15714682-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr25:24572875-24573233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
199, 37
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:6464228-6463856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:17914581-17914956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:20348659-20349046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:21289141-21289520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:27621883-27622288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 323
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr25:12293950-12293571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr25:16064697-16065055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
38-430
               

               
Cow position:
               
chr25:16867030-16867425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr25:7216629-7216998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr25:12899555-12899947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr25:23829317-23828949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr25:26087316-26087699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:1762908-1763266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:6683260-6682868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:7007717-7008102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
246, 26
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:7306099-7306472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:10504534-10504153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
330, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:21191288-21191659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr25:27801091-27801461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
38-433
               

               
Cow position:
               
chr25:19478489-19478873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr25:5847006-5846621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr25:20023592-20023205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
38-445
               

               
Cow position:
               
chr25:6948257-6947857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
38-450
               

               
Cow position:
               
chr25:13272370-13272770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
38-451
               

               
Cow position:
               
chr25:38135549-38135950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
38-455
               

               
Cow position:
               
chr25:7641653-7641254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
38-457
               

               
Cow position:
               
chr25:27868605-27869014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr25:8120577-8120985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr25:16921993-16921584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr25:35347705-35348115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr25:40905028-40904618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
38-465
               

               
Cow position:
               
chr25:26090013-26089616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
236, 39
               

               
Conread position:
               
38-470
               

               
Cow position:
               
chr25:12097643-12098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
38-472
               

               
Cow position:
               
chr25:33664095-33663691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
38-477
               

               
Cow position:
               
chr25:6470419-6469979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
38-484
               

               
Cow position:
               
chr25:24669630-24669219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
422, 39
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr25:6003189-6003051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr25:1735514-1735356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr25:2194747-2194905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
39-202
               

               
Cow position:
               
chr25:31732934-31732771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
39-212
               

               
Cow position:
               
chr25:13736509-13736341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr25:15694786-15694963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
39-253
               

               
Cow position:
               
chr25:7329346-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr25:9642156-9642363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
138, 77
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr25:18564297-18564605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr25:34169756-34170080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
246, 39
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr25:17566389-17566763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr25:17658415-17658784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr25:33959462-33959078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
39-425
               

               
Cow position:
               
chr25:26338247-26338638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
39-432
               

               
Cow position:
               
chr25:17704551-17704921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
39-478
               

               
Cow position:
               
chr25:13380814-13380376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 227
               

               
Conread position:
               
40-200
               

               
Cow position:
               
chr25:20060228-20060068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
40-217
               

               
Cow position:
               
chr25:12824211-12824042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
40-230
               

               
Cow position:
               
chr25:23407039-23406851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
40-238
               

               
Cow position:
               
chr25:2136154-2136348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
40-314
               

               
Cow position:
               
chr25:17144235-17144495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
192, 24
               

               
Conread position:
               
40-359
               

               
Cow position:
               
chr25:21895083-21894773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
194, 37
               

               
Conread position:
               
40-380
               

               
Cow position:
               
chr25:41107561-41107886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
40-430
               

               
Cow position:
               
chr25:11585321-11585709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
40-430
               

               
Cow position:
               
chr25:36081676-36082047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 167
               

               
Conread position:
               
40-432
               

               
Cow position:
               
chr25:26700841-26701202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
40-451
               

               
Cow position:
               
chr25:14512918-14513308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
40-457
               

               
Cow position:
               
chr25:19679145-19679555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
40-462
               

               
Cow position:
               
chr25:36392161-36391727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
40-467
               

               
Cow position:
               
chr25:15410108-15409708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
40-471
               

               
Cow position:
               
chr25:1838042-1838468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
40-480
               

               
Cow position:
               
chr25:22178724-22179135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
40-488
               

               
Cow position:
               
chr25:14791555-14791992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
41-257
               

               
Cow position:
               
chr25:21042191-21042394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
41-362
               

               
Cow position:
               
chr25:24452364-24452051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
41-402
               

               
Cow position:
               
chr25:25861556-25861192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
41-412
               

               
Cow position:
               
chr25:20785780-20785423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
215, 36
               

               
Conread position:
               
42-217
               

               
Cow position:
               
chr25:12817177-12817351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr25:7800941-7801136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
42-350
               

               
Cow position:
               
chr25:4547915-4547615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
42-361
               

               
Cow position:
               
chr25:25051579-25051263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
42-417
               

               
Cow position:
               
chr25:22315006-22315371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
198, 49
               

               
Conread position:
               
42-421
               

               
Cow position:
               
chr25:30279402-30279023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
42-431
               

               
Cow position:
               
chr25:21193139-21192760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr25:16319327-16318968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
215, 34
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr25:33550310-33550693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
42-474
               

               
Cow position:
               
chr25:22203885-22203468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
42-503
               

               
Cow position:
               
chr25:12755686-12755231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
43-196
               

               
Cow position:
               
chr25:41392857-41392703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
43-422
               

               
Cow position:
               
chr25:17342255-17342633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr25:3982852-3983004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr25:12521153-12520998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
45-203
               

               
Cow position:
               
chr25:35110322-35110162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-215
               

               
Cow position:
               
chr25:14833848-14833685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
45-247
               

               
Cow position:
               
chr25:20211278-20211075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
45-256
               

               
Cow position:
               
chr25:5514814-5515021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
45-363
               

               
Cow position:
               
chr25:13672196-13672519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
45-370
               

               
Cow position:
               
chr25:13569359-13569053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr25:26133846-26134218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
45-432
               

               
Cow position:
               
chr25:6474291-6473894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
45-432
               

               
Cow position:
               
chr25:19129661-19130036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
45-462
               

               
Cow position:
               
chr25:14720560-14720942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
212, 73
               

               
Conread position:
               
45-470
               

               
Cow position:
               
chr25:3992598-3993000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
46-202
               

               
Cow position:
               
chr25:6256130-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
46-213
               

               
Cow position:
               
chr25:9961368-9961197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
46-217
               

               
Cow position:
               
chr25:8918466-8918300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
46-319
               

               
Cow position:
               
chr25:11131390-11131656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
188, 31
               

               
Conread position:
               
46-420
               

               
Cow position:
               
chr25:38957779-38958119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
46-492
               

               
Cow position:
               
chr25:7750259-7750689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr25:36746636-36746266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
48-395
               

               
Cow position:
               
chr25:18905692-18906034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
48-430
               

               
Cow position:
               
chr25:11315722-11316082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr25:4681046-4681302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
51-381
               

               
Cow position:
               
chr25:36017353-36017667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
279, 24
               

               
Conread position:
               
51-451
               

               
Cow position:
               
chr25:18721296-18720926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
52-191
               

               
Cow position:
               
chr25:11542725-11542865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
52-211
               

               
Cow position:
               
chr25:23323017-23323176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
52-376
               

               
Cow position:
               
chr25:18894908-18894597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
54-431
               

               
Cow position:
               
chr25:17190927-17190573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
56-467
               

               
Cow position:
               
chr25:26523783-26524174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
60-422
               

               
Cow position:
               
chr25:14931940-14931579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
61-425
               

               
Cow position:
               
chr25:23245185-23244829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
62-422
               

               
Cow position:
               
chr25:30620432-30620063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
63-413
               

               
Cow position:
               
chr25:32277778-32277450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
64-251
               

               
Cow position:
               
chr25:33267550-33267729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
64-372
               

               
Cow position:
               
chr25:15440957-15440657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
65-484
               

               
Cow position:
               
chr25:27532849-27532443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
69-432
               

               
Cow position:
               
chr25:26136996-26136638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
73-409
               

               
Cow position:
               
chr25:20007970-20008293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
211, 23
               

               
Conread position:
               
74-217
               

               
Cow position:
               
chr25:35332994-35333135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
75-272
               

               
Cow position:
               
chr25:9957205-9957015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
75-432
               

               
Cow position:
               
chr25:21893173-21893516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
76-388
               

               
Cow position:
               
chr25:33978379-33978081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr25:8485660-8485311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr25:6121927-6121794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
80-451
               

               
Cow position:
               
chr25:41151120-41150767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
251, 83
               

               
Conread position:
               
80-462
               

               
Cow position:
               
chr25:26679068-26679440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
80-465
               

               
Cow position:
               
chr25:9002515-9002879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
81-412
               

               
Cow position:
               
chr25:7380999-7380675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
81-422
               

               
Cow position:
               
chr25:7673122-7673479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr25:4521993-4521659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr25:31732492-31732207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr25:8961617-8961879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
83-470
               

               
Cow position:
               
chr25:36020248-36020627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
86-462
               

               
Cow position:
               
chr25:5920784-5921162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
86-463
               

               
Cow position:
               
chr25:6292411-6292778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
86-527
               

               
Cow position:
               
chr25:6996628-6997051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
88-422
               

               
Cow position:
               
chr25:9315873-9316196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
149, 11
               

               
Conread position:
               
88-473
               

               
Cow position:
               
chr25:30618914-30619288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr25:19317110-19317341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr25:6687801-6688047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr25:21668098-21668416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
190, 112
               

               
Conread position:
               
92-432
               

               
Cow position:
               
chr25:9269210-9269522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
93-311
               

               
Cow position:
               
chr25:12081469-12081258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
93-363
               

               
Cow position:
               
chr25:22751156-22750892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
93-409
               

               
Cow position:
               
chr25:12609198-12609506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
238, 72
               

               
Conread position:
               
93-430
               

               
Cow position:
               
chr25:13443556-13443227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
94-213
               

               
Cow position:
               
chr25:32588025-32587906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
94-470
               

               
Cow position:
               
chr25:24207564-24207195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
95-422
               

               
Cow position:
               
chr25:11066293-11065967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
95-478
               

               
Cow position:
               
chr25:19849713-19850098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
97-353
               

               
Cow position:
               
chr25:12997449-12997711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
98-462
               

               
Cow position:
               
chr25:22730691-22731039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
99-432
               

               
Cow position:
               
chr25:33686820-33686500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
100-458
               

               
Cow position:
               
chr25:20523370-20523029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
100-478
               

               
Cow position:
               
chr25:7011113-7010745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
101-314
               

               
Cow position:
               
chr25:24051824-24052033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr25:22756474-22756779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
105-423
               

               
Cow position:
               
chr25:15634611-15634293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
105-430
               

               
Cow position:
               
chr25:19364193-19363880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
107-462
               

               
Cow position:
               
chr25:11051397-11051736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
329, 34
               

               
Conread position:
               
111-432
               

               
Cow position:
               
chr25:22346644-22346965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr25:18202054-18201759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
114-417
               

               
Cow position:
               
chr25:33457604-33457896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
114-432
               

               
Cow position:
               
chr25:36872233-36872545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
115-423
               

               
Cow position:
               
chr25:9843051-9843356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 72
               

               
Conread position:
               
120-484
               

               
Cow position:
               
chr25:20664413-20664049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 310
               

               
Conread position:
               
121-432
               

               
Cow position:
               
chr25:17119626-17119926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
123-418
               

               
Cow position:
               
chr25:7816867-7817154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
128-388
               

               
Cow position:
               
chr25:36555801-36555553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
128-432
               

               
Cow position:
               
chr25:30816774-30817074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr25:1824207-1823882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
128-485
               

               
Cow position:
               
chr25:18487559-18487903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
129-381
               

               
Cow position:
               
chr25:12252923-12252673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 77
               

               
Conread position:
               
132-414
               

               
Cow position:
               
chr25:28930788-28930521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
132-431
               

               
Cow position:
               
chr25:17474619-17474331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr25:26051803-26052037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
150-422
               

               
Cow position:
               
chr25:26578701-26578428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
153-421
               

               
Cow position:
               
chr25:7799466-7799725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr25:12305189-12305460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
157-423
               

               
Cow position:
               
chr25:433132-432872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
174-432
               

               
Cow position:
               
chr25:1840255-1840503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
207-432
               

               
Cow position:
               
chr25:13222860-13223080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
207-432
               

               
Cow position:
               
chr25:26072599-26072381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr25:35339230-35339009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
209-470
               

               
Cow position:
               
chr25:28597653-28597390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
210-500
               

               
Cow position:
               
chr25:22153997-22154279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
211-388
               

               
Cow position:
               
chr25:38421629-38421807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
212-432
               

               
Cow position:
               
chr25:26306243-26306021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
212-462
               

               
Cow position:
               
chr25:8346037-8345786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
215-462
               

               
Cow position:
               
chr25:7726628-7726873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 210
               

               
Conread position:
               
217-415
               

               
Cow position:
               
chr25:17918941-17919142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
219-424
               

               
Cow position:
               
chr25:5797474-5797680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
219-435
               

               
Cow position:
               
chr25:11956774-11956989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
219-460
               

               
Cow position:
               
chr25:33311357-33311110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr25:18288797-18288564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 142
               

               
Conread position:
               
220-473
               

               
Cow position:
               
chr25:28423114-28423369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 211
               

               
Conread position:
               
221-417
               

               
Cow position:
               
chr25:13823747-13823552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
223-432
               

               
Cow position:
               
chr25:21317454-21317236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
225-416
               

               
Cow position:
               
chr25:6718270-6718088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
233-434
               

               
Cow position:
               
chr25:31514165-31514368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr25:5807934-5808157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
251-476
               

               
Cow position:
               
chr25:7403338-7403110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr25:6061369-6061529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
262-432
               

               
Cow position:
               
chr25:26061712-26061542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
262-451
               

               
Cow position:
               
chr25:8347669-8347855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
167, 6
               

               
Conread position:
               
262-458
               

               
Cow position:
               
chr25:31657260-31657076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
262-477
               

               
Cow position:
               
chr25:18551319-18551110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr25:7311379-7311211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr25:23323506-23323679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr25:24115300-24115133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
263-476
               

               
Cow position:
               
chr25:22565942-22565739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
263-477
               

               
Cow position:
               
chr25:22373474-22373261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
263-479
               

               
Cow position:
               
chr25:5791701-5791489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
265-470
               

               
Cow position:
               
chr25:14164213-14164415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
189, 171
               

               
Conread position:
               
266-469
               

               
Cow position:
               
chr25:3141522-3141723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
168, 92
               

               
Conread position:
               
266-472
               

               
Cow position:
               
chr25:15999533-15999331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
269-432
               

               
Cow position:
               
chr25:7622842-7623004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
271-417
               

               
Cow position:
               
chr25:7298878-7298726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
276-462
               

               
Cow position:
               
chr25:8411004-8410820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
160, 5
               

               
Conread position:
               
280-432
               

               
Cow position:
               
chr25:26269684-26269532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-409
               

               
Cow position:
               
chr25:35802629-35802500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
281-430
               

               
Cow position:
               
chr25:447869-447726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
281-431
               

               
Cow position:
               
chr25:11855515-11855366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
281-432
               

               
Cow position:
               
chr25:37965291-37965445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
281-451
               

               
Cow position:
               
chr25:26989231-26989397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr25:7684864-7684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr25:33100609-33100779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr25:36369853-36370039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr25:36375544-36375730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
281-484
               

               
Cow position:
               
chr25:18491072-18491264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
281-648
               

               
Cow position:
               
chr25:21547191-21547549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
245, 77
               

               
Conread position:
               
286-435
               

               
Cow position:
               
chr25:9640998-9640849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
288-457
               

               
Cow position:
               
chr25:33272674-33272844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
288-567
               

               
Cow position:
               
chr25:27520913-27520639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
289-417
               

               
Cow position:
               
chr25:18568175-18568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
289-432
               

               
Cow position:
               
chr25:22571000-22571141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
299-465
               

               
Cow position:
               
chr25:22119605-22119443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 115
               

               
Conread position:
               
449-612
               

               
Cow position:
               
chr25:20885082-20884925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
456-641
               

               
Cow position:
               
chr25:40956977-40956792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
460-610
               

               
Cow position:
               
chr25:26652196-26652345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
461-612
               

               
Cow position:
               
chr25:18448827-18448974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
461-646
               

               
Cow position:
               
chr25:6178048-6178234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
462-612
               

               
Cow position:
               
chr25:8576709-8576856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
462-634
               

               
Cow position:
               
chr25:20428335-20428504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
462-645
               

               
Cow position:
               
chr25:24405718-24405536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 43
               

               
Conread position:
               
465-612
               

               
Cow position:
               
chr25:13560192-13560051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
468-592
               

               
Cow position:
               
chr25:34379084-34378962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr25:18239530-18239674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr25:20076518-20076661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-612
               

               
Cow position:
               
chr25:27534897-27534756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
468-613
               

               
Cow position:
               
chr25:14075325-14075467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-613
               

               
Cow position:
               
chr25:26240560-26240703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-626
               

               
Cow position:
               
chr25:12932647-12932806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
468-633
               

               
Cow position:
               
chr25:36501220-36501055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
468-637
               

               
Cow position:
               
chr25:23248719-23248553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr25:13321203-13321371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr25:17701972-17701792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr25:33205057-33204884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
469-612
               

               
Cow position:
               
chr25:5407764-5407896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
472-612
               

               
Cow position:
               
chr25:2135234-2135090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
475-634
               

               
Cow position:
               
chr25:18228206-18228360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
527-645
               

               
Cow position:
               
chr25:32594787-32594665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 44
               
Show alignments to all cow chromosomes.