Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Mixc-0026,m12.5
        

               Conread position:
               2-167
               

               Cow position:
               chrX:37377367-37377533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               9-187
               

               Cow position:
               chrX:12290629-12290452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               10-134
               

               Cow position:
               chrX:6690353-6690479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               10-187
               

               Cow position:
               chrX:28845734-28845559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               126, 46
               

               Conread position:
               10-209
               

               Cow position:
               chrX:8103199-8103401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               12-187
               

               Cow position:
               chrX:2300825-2300646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               12-187
               

               Cow position:
               chrX:7178801-7178627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               12-187
               

               Cow position:
               chrX:32978360-32978542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               13-134
               

               Cow position:
               chrX:6563403-6563281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               13-135
               

               Cow position:
               chrX:37910343-37910221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               13-187
               

               Cow position:
               chrX:2485743-2485916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               123, 10
               

               Conread position:
               13-187
               

               Cow position:
               chrX:33466508-33466332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               14-156
               

               Cow position:
               chrX:48536776-48536920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               14-179
               

               Cow position:
               chrX:40774584-40774745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               14-183
               

               Cow position:
               chrX:42874867-42874697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               14-185
               

               Cow position:
               chrX:42994502-42994331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               14-187
               

               Cow position:
               chrX:20340002-20340176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               14-187
               

               Cow position:
               chrX:37072294-37072121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               15-129
               

               Cow position:
               chrX:4865140-4865025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               15-161
               

               Cow position:
               chrX:20151741-20151591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               15-162
               

               Cow position:
               chrX:14973846-14973992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               15-187
               

               Cow position:
               chrX:40734029-40734200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               15-228
               

               Cow position:
               chrX:34270296-34270090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               17-126
               

               Cow position:
               chrX:6488469-6488363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               17-142
               

               Cow position:
               chrX:27394126-27394252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               17-149
               

               Cow position:
               chrX:17888521-17888652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               17-179
               

               Cow position:
               chrX:34532414-34532254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               119, 97
               

               Conread position:
               17-183
               

               Cow position:
               chrX:33855350-33855522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 9
               

               Conread position:
               17-184
               

               Cow position:
               chrX:16762659-16762490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               17-187
               

               Cow position:
               chrX:878484-878653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               17-187
               

               Cow position:
               chrX:2478741-2478912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 115
               

               Conread position:
               17-187
               

               Cow position:
               chrX:4123724-4123550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               17-187
               

               Cow position:
               chrX:7646149-7645973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               17-187
               

               Cow position:
               chrX:7695641-7695478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               17-187
               

               Cow position:
               chrX:12096364-12096532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               17-187
               

               Cow position:
               chrX:25283257-25283425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               17-187
               

               Cow position:
               chrX:27705474-27705308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               120, 32
               

               Conread position:
               17-187
               

               Cow position:
               chrX:31294664-31294825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               17-187
               

               Cow position:
               chrX:31373458-31373293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               17-187
               

               Cow position:
               chrX:32743427-32743253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               17-187
               

               Cow position:
               chrX:34990928-34990756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               17-187
               

               Cow position:
               chrX:35268775-35268605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               17-187
               

               Cow position:
               chrX:38577421-38577248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               17-236
               

               Cow position:
               chrX:37102162-37102375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               18-130
               

               Cow position:
               chrX:23970276-23970162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               18-136
               

               Cow position:
               chrX:16789950-16790070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               18-154
               

               Cow position:
               chrX:23497781-23497915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 7
               

               Conread position:
               18-186
               

               Cow position:
               chrX:9161477-9161304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               18-186
               

               Cow position:
               chrX:15545782-15545613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               18-186
               

               Cow position:
               chrX:21795382-21795212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               18-187
               

               Cow position:
               chrX:19196633-19196803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               18-187
               

               Cow position:
               chrX:22482804-22482974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               18-187
               

               Cow position:
               chrX:38094641-38094810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               20-134
               

               Cow position:
               chrX:2206662-2206775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               20-187
               

               Cow position:
               chrX:3653648-3653478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               20-187
               

               Cow position:
               chrX:5017524-5017691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               20-187
               

               Cow position:
               chrX:6413929-6413761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               20-187
               

               Cow position:
               chrX:7571789-7571621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               20-187
               

               Cow position:
               chrX:16783376-16783209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               21-123
               

               Cow position:
               chrX:20752143-20752040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               21-133
               

               Cow position:
               chrX:1514518-1514634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               21-134
               

               Cow position:
               chrX:6640009-6639893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               21-134
               

               Cow position:
               chrX:14900838-14900952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               21-134
               

               Cow position:
               chrX:23514131-23514249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               21-134
               

               Cow position:
               chrX:36975833-36975718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               21-134
               

               Cow position:
               chrX:42492631-42492741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               21-134
               

               Cow position:
               chrX:44908203-44908091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               21-144
               

               Cow position:
               chrX:32128099-32128220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               21-156
               

               Cow position:
               chrX:11073304-11073445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-156
               

               Cow position:
               chrX:25816016-25816150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               115, 13
               

               Conread position:
               21-170
               

               Cow position:
               chrX:10095911-10095758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               21-175
               

               Cow position:
               chrX:40647861-40647705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               21-179
               

               Cow position:
               chrX:8925585-8925429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               21-182
               

               Cow position:
               chrX:161306-161148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               21-182
               

               Cow position:
               chrX:39704584-39704424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               21-183
               

               Cow position:
               chrX:10865984-10866148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               21-183
               

               Cow position:
               chrX:31442938-31443102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               141
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               21-183
               

               Cow position:
               chrX:34238604-34238440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               21-186
               

               Cow position:
               chrX:7382207-7382039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-186
               

               Cow position:
               chrX:31949050-31949215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               139
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               115, 11
               

               Conread position:
               21-186
               

               Cow position:
               chrX:42585187-42585352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               21-187
               

               Cow position:
               chrX:1055509-1055673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               21-187
               

               Cow position:
               chrX:7277799-7277643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 15
               

               Conread position:
               21-187
               

               Cow position:
               chrX:7550917-7551080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               116, 7
               

               Conread position:
               21-187
               

               Cow position:
               chrX:10916633-10916469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               114, 13
               

               Conread position:
               21-187
               

               Cow position:
               chrX:11820238-11820073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               21-187
               

               Cow position:
               chrX:11844363-11844523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               21-187
               

               Cow position:
               chrX:11949609-11949778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:12249687-12249516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               21-187
               

               Cow position:
               chrX:13868577-13868412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               21-187
               

               Cow position:
               chrX:15147305-15147469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               21-187
               

               Cow position:
               chrX:15485743-15485910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               21-187
               

               Cow position:
               chrX:16721920-16722087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:18655922-18656090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:18695036-18695206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:19290650-19290487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 74
               

               Conread position:
               21-187
               

               Cow position:
               chrX:20030138-20029962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:20697723-20697888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               21-187
               

               Cow position:
               chrX:21665710-21665876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               21-187
               

               Cow position:
               chrX:21785651-21785483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 158
               

               Conread position:
               21-187
               

               Cow position:
               chrX:24105510-24105341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               140
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:27096002-27095834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               21-187
               

               Cow position:
               chrX:28111388-28111210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:28632599-28632763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:29169451-29169619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:30162880-30162712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               21-187
               

               Cow position:
               chrX:30454740-30454907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:32144281-32144448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:32188475-32188644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               21-187
               

               Cow position:
               chrX:34192557-34192396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:34401882-34401713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 163
               

               Conread position:
               21-187
               

               Cow position:
               chrX:35224180-35224017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               21-187
               

               Cow position:
               chrX:37489615-37489433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:38967534-38967367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 148
               

               Conread position:
               21-187
               

               Cow position:
               chrX:40602842-40602679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               21-187
               

               Cow position:
               chrX:41103672-41103503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               21-187
               

               Cow position:
               chrX:41743795-41743628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               21-187
               

               Cow position:
               chrX:48135000-48135165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               21-188
               

               Cow position:
               chrX:24587575-24587740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 7
               

               Conread position:
               22-134
               

               Cow position:
               chrX:30962991-30963103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-184
               

               Cow position:
               chrX:32870906-32871068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               114, 59
               

               Conread position:
               22-187
               

               Cow position:
               chrX:38227210-38227375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 23
               

               Conread position:
               23-177
               

               Cow position:
               chrX:2963930-2963775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               23-187
               

               Cow position:
               chrX:7809122-7809288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 153
               

               Conread position:
               23-187
               

               Cow position:
               chrX:18194791-18194628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 20
               

               Conread position:
               23-187
               

               Cow position:
               chrX:18293810-18293651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               23-187
               

               Cow position:
               chrX:18989920-18990085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 85
               

               Conread position:
               23-187
               

               Cow position:
               chrX:23122265-23122100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               79, 155
               

               Conread position:
               23-188
               

               Cow position:
               chrX:6493610-6493446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               24-128
               

               Cow position:
               chrX:29509565-29509669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-134
               

               Cow position:
               chrX:27176441-27176551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-134
               

               Cow position:
               chrX:34543665-34543556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               24-142
               

               Cow position:
               chrX:11856307-11856189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 62
               

               Conread position:
               24-160
               

               Cow position:
               chrX:32020243-32020380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               24-187
               

               Cow position:
               chrX:33020364-33020201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 84
               

               Conread position:
               24-187
               

               Cow position:
               chrX:33205113-33205277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               24-187
               

               Cow position:
               chrX:45430138-45430303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               25-124
               

               Cow position:
               chrX:23091759-23091660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-130
               

               Cow position:
               chrX:39558469-39558575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               25-130
               

               Cow position:
               chrX:47243400-47243506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               25-130
               

               Cow position:
               chrX:48578293-48578188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-132
               

               Cow position:
               chrX:7513392-7513287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               25-132
               

               Cow position:
               chrX:13265742-13265849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-134
               

               Cow position:
               chrX:9201424-9201316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               25-134
               

               Cow position:
               chrX:22821925-22821816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-134
               

               Cow position:
               chrX:26876005-26876112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               25-134
               

               Cow position:
               chrX:32623460-32623352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               25-139
               

               Cow position:
               chrX:42339058-42339171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-141
               

               Cow position:
               chrX:11939049-11939163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 71
               

               Conread position:
               25-143
               

               Cow position:
               chrX:9416815-9416934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               25-143
               

               Cow position:
               chrX:19930533-19930416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               25-148
               

               Cow position:
               chrX:41167087-41167208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               25-151
               

               Cow position:
               chrX:45787532-45787405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-164
               

               Cow position:
               chrX:47247031-47247171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               25-174
               

               Cow position:
               chrX:488369-488218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               25-177
               

               Cow position:
               chrX:7497121-7496974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               25-178
               

               Cow position:
               chrX:16531875-16531723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               108, 83
               

               Conread position:
               25-179
               

               Cow position:
               chrX:6675045-6675202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               25-179
               

               Cow position:
               chrX:10915916-10915761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-179
               

               Cow position:
               chrX:12018154-12017998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               25-179
               

               Cow position:
               chrX:25587313-25587159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 71
               

               Conread position:
               25-179
               

               Cow position:
               chrX:35413510-35413353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-181
               

               Cow position:
               chrX:29925702-29925855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               25-182
               

               Cow position:
               chrX:9997457-9997611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               25-182
               

               Cow position:
               chrX:28097999-28097845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               25-183
               

               Cow position:
               chrX:19596151-19595992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               25-184
               

               Cow position:
               chrX:17794863-17794713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               25-185
               

               Cow position:
               chrX:30228233-30228394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-186
               

               Cow position:
               chrX:25301873-25302032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               25-186
               

               Cow position:
               chrX:32583935-32584097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:917494-917655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               25-187
               

               Cow position:
               chrX:1550828-1550665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:2786671-2786831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:3161136-3161301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:3648931-3649093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 131
               

               Conread position:
               25-187
               

               Cow position:
               chrX:4269189-4269352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               25-187
               

               Cow position:
               chrX:4632972-4633136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               25-187
               

               Cow position:
               chrX:5047026-5047182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               25-187
               

               Cow position:
               chrX:5376247-5376084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:6544134-6543971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:9096544-9096382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 88
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11082736-11082898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               111, 83
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11313900-11314063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11581822-11581650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 162
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11674943-11674773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11717906-11718065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11806139-11806302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:11973723-11973560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:12309507-12309673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               25-187
               

               Cow position:
               chrX:12852632-12852794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 83
               

               Conread position:
               25-187
               

               Cow position:
               chrX:13647907-13648069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 24
               

               Conread position:
               25-187
               

               Cow position:
               chrX:15120011-15120174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:15329530-15329368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 88
               

               Conread position:
               25-187
               

               Cow position:
               chrX:16703548-16703385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:16711832-16711669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:16853511-16853674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:18078032-18078195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:18897778-18897936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               112, 56
               

               Conread position:
               25-187
               

               Cow position:
               chrX:18949867-18950030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:20376843-20376685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               25-187
               

               Cow position:
               chrX:20877885-20878048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:20887768-20887929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               110, 39
               

               Conread position:
               25-187
               

               Cow position:
               chrX:20945439-20945283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               25-187
               

               Cow position:
               chrX:21227351-21227187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:21593161-21593001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               111, 126
               

               Conread position:
               25-187
               

               Cow position:
               chrX:21861790-21861960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               25-187
               

               Cow position:
               chrX:22493885-22493722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:22811763-22811601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               111, 92
               

               Conread position:
               25-187
               

               Cow position:
               chrX:23024581-23024419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:23264559-23264722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:23280884-23280721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:23316545-23316705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 126
               

               Conread position:
               25-187
               

               Cow position:
               chrX:24102857-24102694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:25452427-25452264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               25-187
               

               Cow position:
               chrX:25741236-25741399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:26531836-26531673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:27106136-27105973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:28847001-28847161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               111, 127
               

               Conread position:
               25-187
               

               Cow position:
               chrX:28866118-28866274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               25-187
               

               Cow position:
               chrX:29780622-29780460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               25-187
               

               Cow position:
               chrX:29848753-29848916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:30143407-30143569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 139
               

               Conread position:
               25-187
               

               Cow position:
               chrX:30180048-30180211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:30823394-30823231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               25-187
               

               Cow position:
               chrX:32094572-32094735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:33615283-33615120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:33803135-33803301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:34441574-34441732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               25-187
               

               Cow position:
               chrX:34454544-34454384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 9
               

               Conread position:
               25-187
               

               Cow position:
               chrX:35240742-35240579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:35409537-35409383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               25-187
               

               Cow position:
               chrX:36240271-36240110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               25-187
               

               Cow position:
               chrX:36249984-36250147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:37843598-37843435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:38151566-38151403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:38963984-38963827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               25-187
               

               Cow position:
               chrX:39174334-39174498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               25-187
               

               Cow position:
               chrX:41122948-41122787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               25-187
               

               Cow position:
               chrX:41157189-41157026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               25-187
               

               Cow position:
               chrX:41192564-41192405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               25-187
               

               Cow position:
               chrX:41733310-41733472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               25-187
               

               Cow position:
               chrX:42086739-42086577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               111, 97
               

               Conread position:
               25-187
               

               Cow position:
               chrX:44054681-44054520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               25-187
               

               Cow position:
               chrX:45412777-45412937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:45658194-45658365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               25-187
               

               Cow position:
               chrX:45787006-45786845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               112, 71
               

               Conread position:
               25-187
               

               Cow position:
               chrX:48227735-48227900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               25-196
               

               Cow position:
               chrX:21064163-21063992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               25-200
               

               Cow position:
               chrX:15139667-15139838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               25-247
               

               Cow position:
               chrX:27509142-27509365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               111, 141
               

               Conread position:
               26-133
               

               Cow position:
               chrX:42499154-42499259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               26-164
               

               Cow position:
               chrX:27432041-27432180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 131
               

               Conread position:
               26-187
               

               Cow position:
               chrX:1576386-1576548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:2351940-2351777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:2425243-2425407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:4622077-4622239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:5127796-5127636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               26-187
               

               Cow position:
               chrX:14134352-14134190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:14846197-14846359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:18244864-18244704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 96
               

               Conread position:
               26-187
               

               Cow position:
               chrX:19015317-19015157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               26-187
               

               Cow position:
               chrX:20582907-20582745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:22557378-22557216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               26-187
               

               Cow position:
               chrX:24193987-24193824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:26440903-26441065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:27976950-27977114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:29844599-29844761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               26-187
               

               Cow position:
               chrX:32171009-32171167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               26-187
               

               Cow position:
               chrX:35288537-35288375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               26-187
               

               Cow position:
               chrX:35609863-35609701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               139
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:36514329-36514168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 87
               

               Conread position:
               26-187
               

               Cow position:
               chrX:38014971-38014809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-187
               

               Cow position:
               chrX:43767660-43767822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               26-187
               

               Cow position:
               chrX:44192576-44192727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               26-187
               

               Cow position:
               chrX:48370974-48370811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-130
               

               Cow position:
               chrX:48684347-48684450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-187
               

               Cow position:
               chrX:21749586-21749744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               27-187
               

               Cow position:
               chrX:39555940-39556101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               27-187
               

               Cow position:
               chrX:42470061-42470222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               135
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               27-187
               

               Cow position:
               chrX:44087181-44087019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               28-125
               

               Cow position:
               chrX:19019236-19019334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-130
               

               Cow position:
               chrX:619133-619235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-133
               

               Cow position:
               chrX:17662722-17662827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-133
               

               Cow position:
               chrX:21672426-21672321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-133
               

               Cow position:
               chrX:35542766-35542661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-133
               

               Cow position:
               chrX:42011154-42011050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:5900332-5900226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:6278631-6278737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:17231609-17231503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:33519492-33519386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:38549323-38549217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-134
               

               Cow position:
               chrX:38642132-38642029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               28-145
               

               Cow position:
               chrX:678693-678811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-148
               

               Cow position:
               chrX:9360757-9360639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               28-155
               

               Cow position:
               chrX:41673979-41673849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               28-163
               

               Cow position:
               chrX:19690092-19689957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               115, 80
               

               Conread position:
               28-166
               

               Cow position:
               chrX:42381225-42381362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 107
               

               Conread position:
               28-175
               

               Cow position:
               chrX:5856452-5856596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               28-175
               

               Cow position:
               chrX:15717805-15717951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-175
               

               Cow position:
               chrX:37416202-37416348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 12
               

               Conread position:
               28-176
               

               Cow position:
               chrX:45693981-45693832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-177
               

               Cow position:
               chrX:21495633-21495483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-178
               

               Cow position:
               chrX:11655963-11655803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               28-178
               

               Cow position:
               chrX:12314229-12314078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-178
               

               Cow position:
               chrX:48800411-48800261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-179
               

               Cow position:
               chrX:5123486-5123638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-179
               

               Cow position:
               chrX:14800944-14801094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-179
               

               Cow position:
               chrX:26709479-26709327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-179
               

               Cow position:
               chrX:27627228-27627078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-179
               

               Cow position:
               chrX:28105795-28105645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               28-179
               

               Cow position:
               chrX:28603042-28603191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 87
               

               Conread position:
               28-182
               

               Cow position:
               chrX:8730954-8730799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-182
               

               Cow position:
               chrX:13912955-13912799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-183
               

               Cow position:
               chrX:151775-151620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               28-183
               

               Cow position:
               chrX:34376830-34376676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 66
               

               Conread position:
               28-184
               

               Cow position:
               chrX:9128929-9128774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-184
               

               Cow position:
               chrX:25848791-25848633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-185
               

               Cow position:
               chrX:361580-361736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-185
               

               Cow position:
               chrX:754833-754675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               28-185
               

               Cow position:
               chrX:2467754-2467597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-185
               

               Cow position:
               chrX:10293289-10293445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-185
               

               Cow position:
               chrX:12466367-12466212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-185
               

               Cow position:
               chrX:13448143-13447987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-185
               

               Cow position:
               chrX:13923293-13923144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 60
               

               Conread position:
               28-185
               

               Cow position:
               chrX:38218582-38218435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               28-185
               

               Cow position:
               chrX:41790570-41790723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-185
               

               Cow position:
               chrX:42165948-42165792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-185
               

               Cow position:
               chrX:45502023-45501865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-185
               

               Cow position:
               chrX:48224311-48224469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:2812539-2812696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-186
               

               Cow position:
               chrX:3207686-3207846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:3654477-3654324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-186
               

               Cow position:
               chrX:8899899-8899740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               135
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:23061327-23061170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               28-186
               

               Cow position:
               chrX:24317935-24317782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               28-186
               

               Cow position:
               chrX:31260755-31260915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:35273227-35273060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:35388031-35388191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:38102570-38102728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 89
               

               Conread position:
               28-186
               

               Cow position:
               chrX:40480998-40481157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               28-186
               

               Cow position:
               chrX:41049990-41049829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-186
               

               Cow position:
               chrX:46578982-46579139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:126667-126506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:671134-671294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:1331809-1331647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:1616173-1616336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:1810288-1810446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 39
               

               Conread position:
               28-187
               

               Cow position:
               chrX:2274790-2274632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:2417611-2417769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:2523855-2524015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:2944993-2945153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:3464205-3464361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:3570326-3570166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:4325622-4325782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:4404408-4404250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:4629814-4629976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:4869418-4869258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:4905114-4905274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5112683-5112841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5288814-5288972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5599105-5599263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5638291-5638453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5893101-5892943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:5919347-5919185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               28-187
               

               Cow position:
               chrX:6195881-6196039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:6454568-6454410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:6655392-6655552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:6659247-6659088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               28-187
               

               Cow position:
               chrX:6829009-6828850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7118771-7118929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 11
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7311866-7311708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7677844-7677683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7718729-7718571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               80, 125
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7742584-7742742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:7755774-7755616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:8530413-8530255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:8782619-8782459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:8797122-8796965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9085460-9085618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9154233-9154075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9227107-9227269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9252306-9252459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9593262-9593420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9651173-9651330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:9898466-9898627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10306545-10306388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10412114-10412271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10415651-10415811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10428414-10428255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 138
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10496106-10495948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10718384-10718225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 85
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10932545-10932387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:10992491-10992333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:11358192-11358350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:11566787-11566629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:11664051-11663893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:12001274-12001432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:12145967-12145810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:12360762-12360604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:12826622-12826462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:13396379-13396537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:13971354-13971512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14135054-14134896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14152342-14152500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14163066-14162906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14221954-14221798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14409514-14409672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14598718-14598560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14599404-14599248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 93
               

               Conread position:
               28-187
               

               Cow position:
               chrX:14884087-14884249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15007279-15007436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15008559-15008717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15090894-15091052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15346096-15346254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15505166-15505006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15531282-15531440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15577768-15577926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15589997-15590157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:15620659-15620817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16279522-16279364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16286082-16285924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16289687-16289847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16466174-16466015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16478775-16478617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:16807882-16808041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:17271414-17271574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:17964648-17964800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:17980468-17980310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:17995332-17995174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:18024912-18024754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:18462102-18462260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:19022436-19022594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:19109168-19109326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:19188811-19188651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:20031958-20032116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:20742861-20742701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:21011449-21011607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:21063091-21062931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:21255911-21255752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 68
               

               Conread position:
               28-187
               

               Cow position:
               chrX:21833760-21833600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:22078200-22078042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:22115407-22115567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:22568144-22568304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:22873273-22873112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:22888534-22888373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:23109632-23109477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:23299829-23299669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:23452725-23452883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:23571925-23572085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:23583433-23583273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:24125197-24125356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 85
               

               Conread position:
               28-187
               

               Cow position:
               chrX:24280810-24280650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:24441372-24441532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:24735813-24735653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25035513-25035671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25276626-25276784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25288806-25288964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25338054-25337892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25419287-25419445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25458762-25458922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25618037-25618203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:25945962-25946119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-187
               

               Cow position:
               chrX:26276012-26275854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:26492877-26492717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:26625802-26625970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:26759696-26759854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:26974784-26974625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 8
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27404073-27404230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27442681-27442837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 53
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27446563-27446406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27459131-27458970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27498643-27498483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27594309-27594465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27759580-27759422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27761215-27761055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27982273-27982430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:27997521-27997365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 68
               

               Conread position:
               28-187
               

               Cow position:
               chrX:28057922-28058080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:28134221-28134064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               28-187
               

               Cow position:
               chrX:28517850-28518009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 90
               

               Conread position:
               28-187
               

               Cow position:
               chrX:28588845-28588685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:28646113-28646270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:29226349-29226191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:29864559-29864716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30021225-30021383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30060656-30060816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30159136-30159296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30171837-30171995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30197170-30197012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30543416-30543567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 58
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30837246-30837088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30863326-30863484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30919517-30919679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               28-187
               

               Cow position:
               chrX:30941054-30940896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:31250264-31250106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               107, 74
               

               Conread position:
               28-187
               

               Cow position:
               chrX:31489386-31489227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               107, 66
               

               Conread position:
               28-187
               

               Cow position:
               chrX:32038970-32039128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:32747535-32747373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:34333327-34333485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:34413649-34413491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:34502793-34502638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               28-187
               

               Cow position:
               chrX:34754317-34754477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:35042094-35041937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-187
               

               Cow position:
               chrX:35533724-35533566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:35612672-35612829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:35803687-35803529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:36365094-36364936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:36778282-36778120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:36840747-36840582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               28-187
               

               Cow position:
               chrX:37232284-37232127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-187
               

               Cow position:
               chrX:37299471-37299311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               28-187
               

               Cow position:
               chrX:37403147-37403308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:37497574-37497732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:37816461-37816303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:38006893-38007053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:38051559-38051717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               28-187
               

               Cow position:
               chrX:38439349-38439188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:38442835-38442677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:39386391-39386550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 118
               

               Conread position:
               28-187
               

               Cow position:
               chrX:39731386-39731228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:40452338-40452498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:40591559-40591401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:41238491-41238648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               28-187
               

               Cow position:
               chrX:41846657-41846819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42171425-42171581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42247309-42247461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42461871-42462033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42591598-42591440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42779253-42779411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:42855283-42855126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               108, 122
               

               Conread position:
               28-187
               

               Cow position:
               chrX:43101400-43101242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:43979492-43979333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 8
               

               Conread position:
               28-187
               

               Cow position:
               chrX:44168436-44168594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:44851969-44851805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:45373418-45373577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               109, 56
               

               Conread position:
               28-187
               

               Cow position:
               chrX:45467346-45467505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:45904051-45903893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:46032847-46033003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               28-187
               

               Cow position:
               chrX:46606638-46606795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               28-187
               

               Cow position:
               chrX:47210973-47211135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:47344169-47344009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:47608287-47608129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               28-187
               

               Cow position:
               chrX:48205037-48205198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:48328512-48328672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-187
               

               Cow position:
               chrX:48456470-48456630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               28-188
               

               Cow position:
               chrX:626170-626330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               28-188
               

               Cow position:
               chrX:14407577-14407736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 63
               

               Conread position:
               28-188
               

               Cow position:
               chrX:39346911-39347072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               28-201
               

               Cow position:
               chrX:37836462-37836290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               86, 125
               

               Conread position:
               28-213
               

               Cow position:
               chrX:31556623-31556807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 162
               

               Conread position:
               28-234
               

               Cow position:
               chrX:7351170-7350966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               28-237
               

               Cow position:
               chrX:48675952-48675740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 181
               

               Conread position:
               29-142
               

               Cow position:
               chrX:8492884-8492996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-143
               

               Cow position:
               chrX:21663182-21663070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               29-143
               

               Cow position:
               chrX:40789078-40788964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-144
               

               Cow position:
               chrX:47232711-47232595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-163
               

               Cow position:
               chrX:15596911-15596777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               107, 84
               

               Conread position:
               29-169
               

               Cow position:
               chrX:40183476-40183617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               29-177
               

               Cow position:
               chrX:18941348-18941498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               29-180
               

               Cow position:
               chrX:42587556-42587707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               29-183
               

               Cow position:
               chrX:29289450-29289295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:1781780-1781620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:1946842-1947006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:1975722-1975882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:2362374-2362214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:2664884-2664724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:3157493-3157333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:3387981-3387821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:3658179-3658339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:3808282-3808121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:5640759-5640904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:5646229-5646389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:6012232-6012392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:6558728-6558565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:8641662-8641503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:9018428-9018588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:10922696-10922856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:11860367-11860527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:12032846-12032686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:15781456-15781296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:16078538-16078384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               29-187
               

               Cow position:
               chrX:18451204-18451364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:19495085-19495245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:19774605-19774765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:20099197-20099037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:22608717-22608877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:22812934-22812777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               29-187
               

               Cow position:
               chrX:23563923-23564082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:24967144-24966984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:28555560-28555720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:29877306-29877466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:30538277-30538437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:30899512-30899673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:30950403-30950243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:30965976-30965816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:30981290-30981450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:34095436-34095276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:35497961-35497801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:36479807-36479647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:36677796-36677953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               29-187
               

               Cow position:
               chrX:36730259-36730099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:36820357-36820517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:37060916-37061076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:37958372-37958212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:38071897-38072052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               29-187
               

               Cow position:
               chrX:40269358-40269191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:40544734-40544895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:41403846-41403676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:41410394-41410224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:41885920-41886080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               29-187
               

               Cow position:
               chrX:46722867-46723026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               29-188
               

               Cow position:
               chrX:24424514-24424678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 153
               

               Conread position:
               29-188
               

               Cow position:
               chrX:33822974-33822815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               30-172
               

               Cow position:
               chrX:17725847-17725708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               30-184
               

               Cow position:
               chrX:46447955-46448110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               116, 67
               

               Conread position:
               30-185
               

               Cow position:
               chrX:36693108-36692952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               30-185
               

               Cow position:
               chrX:42507774-42507927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               106, 122
               

               Conread position:
               30-187
               

               Cow position:
               chrX:616534-616688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               30-187
               

               Cow position:
               chrX:7806251-7806093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               30-187
               

               Cow position:
               chrX:12115912-12115756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               85, 105
               

               Conread position:
               30-187
               

               Cow position:
               chrX:20801651-20801493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               30-187
               

               Cow position:
               chrX:23451300-23451456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               106, 13
               

               Conread position:
               30-187
               

               Cow position:
               chrX:25238049-25237893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               135
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               106, 78
               

               Conread position:
               30-187
               

               Cow position:
               chrX:27516405-27516248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               106, 117
               

               Conread position:
               30-187
               

               Cow position:
               chrX:27590167-27590318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               106, 121
               

               Conread position:
               30-187
               

               Cow position:
               chrX:30138911-30139069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               30-187
               

               Cow position:
               chrX:37544820-37544663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               103, 122
               

               Conread position:
               30-187
               

               Cow position:
               chrX:43527376-43527218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               30-187
               

               Cow position:
               chrX:43647870-43648029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               30-187
               

               Cow position:
               chrX:46771097-46771257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               30-187
               

               Cow position:
               chrX:47967472-47967315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 106
               

               Conread position:
               30-187
               

               Cow position:
               chrX:48248698-48248538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               30-195
               

               Cow position:
               chrX:33639844-33639671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               31-129
               

               Cow position:
               chrX:22074672-22074574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-133
               

               Cow position:
               chrX:7721856-7721754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-170
               

               Cow position:
               chrX:45403962-45404102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               31-187
               

               Cow position:
               chrX:48195169-48195326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               32-134
               

               Cow position:
               chrX:6654431-6654533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-167
               

               Cow position:
               chrX:17743933-17743798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               32-187
               

               Cow position:
               chrX:2151060-2151217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:7510010-7509852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:10527902-10528059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               32-187
               

               Cow position:
               chrX:11672654-11672496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:14924870-14924715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               134
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               32-187
               

               Cow position:
               chrX:31436353-31436195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:32010904-32010746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:39549203-39549045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:39699198-39699041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:41879063-41879215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               32-187
               

               Cow position:
               chrX:44980165-44980322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               32-187
               

               Cow position:
               chrX:45414429-45414585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               33-162
               

               Cow position:
               chrX:9635311-9635439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               103, 115
               

               Conread position:
               33-187
               

               Cow position:
               chrX:34009620-34009465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               34-168
               

               Cow position:
               chrX:26883265-26883401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               34-187
               

               Cow position:
               chrX:17497965-17497811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               135
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               34-187
               

               Cow position:
               chrX:29049837-29049690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               34-187
               

               Cow position:
               chrX:39546105-39546258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 63
               

               Conread position:
               34-187
               

               Cow position:
               chrX:40557808-40557961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               102, 15
               

               Conread position:
               34-187
               

               Cow position:
               chrX:42733734-42733580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               35-187
               

               Cow position:
               chrX:43218262-43218107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               36-171
               

               Cow position:
               chrX:45956047-45955912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-185
               

               Cow position:
               chrX:27020070-27019920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               36-187
               

               Cow position:
               chrX:15304458-15304610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               36-187
               

               Cow position:
               chrX:20976197-20976344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               36-187
               

               Cow position:
               chrX:26619497-26619647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               36-187
               

               Cow position:
               chrX:34565160-34565015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               36-187
               

               Cow position:
               chrX:40648529-40648381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               36-187
               

               Cow position:
               chrX:47379601-47379752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               37-182
               

               Cow position:
               chrX:34554594-34554450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 84
               

               Conread position:
               37-187
               

               Cow position:
               chrX:39187500-39187652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               37-188
               

               Cow position:
               chrX:12437375-12437522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               38-180
               

               Cow position:
               chrX:48246972-48247113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               38-187
               

               Cow position:
               chrX:5872178-5872031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 113
               

               Conread position:
               38-187
               

               Cow position:
               chrX:19636773-19636625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               38-187
               

               Cow position:
               chrX:22325941-22325790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               38-187
               

               Cow position:
               chrX:22538089-22538239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:23235695-23235545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:24291817-24291967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:27469789-27469939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:30133464-30133609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 36
               

               Conread position:
               38-187
               

               Cow position:
               chrX:37079674-37079824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:39954673-39954823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:44834951-44835101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               38-187
               

               Cow position:
               chrX:45420808-45420960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               38-206
               

               Cow position:
               chrX:24169450-24169619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 133
               

               Conread position:
               40-187
               

               Cow position:
               chrX:45113491-45113351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               41-183
               

               Cow position:
               chrX:29723310-29723170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               41-184
               

               Cow position:
               chrX:45410180-45410325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               41-185
               

               Cow position:
               chrX:47481661-47481515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               41-187
               

               Cow position:
               chrX:14781483-14781630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               41-188
               

               Cow position:
               chrX:17692122-17691974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               42-182
               

               Cow position:
               chrX:30338063-30338198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               43-187
               

               Cow position:
               chrX:32214611-32214756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               43-187
               

               Cow position:
               chrX:45089302-45089152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 40
               

               Conread position:
               44-132
               

               Cow position:
               chrX:20168065-20167975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               44-187
               

               Cow position:
               chrX:45968022-45967877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               46-185
               

               Cow position:
               chrX:43115027-43114890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               50-186
               

               Cow position:
               chrX:42927933-42928066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               50-187
               

               Cow position:
               chrX:31729309-31729173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               52-187
               

               Cow position:
               chrX:17888209-17888073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               55-187
               

               Cow position:
               chrX:28157333-28157200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               57-249
               

               Cow position:
               chrX:47854537-47854721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               63-187
               

               Cow position:
               chrX:36311435-36311314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               64-179
               

               Cow position:
               chrX:39415634-39415518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               64-183
               

               Cow position:
               chrX:9044019-9044137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               64-188
               

               Cow position:
               chrX:40826908-40827033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               69-187
               

               Cow position:
               chrX:11614555-11614436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               69-187
               

               Cow position:
               chrX:47965151-47965270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               70-187
               

               Cow position:
               chrX:37129152-37129038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               71-187
               

               Cow position:
               chrX:42221741-42221853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               88-200
               

               Cow position:
               chrX:170134-170247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               101-187
               

               Cow position:
               chrX:11583344-11583429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               76
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               307-443
               

               Cow position:
               chrX:5872321-5872190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               308-442
               

               Cow position:
               chrX:27228131-27227997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 10
               
Show alignments to all cow chromosomes.
Conread position:	2-167
Cow position:	chrX:37377367-37377533 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	117
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	134, 0
Conread position:	9-187
Cow position:	chrX:12290629-12290452 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	138
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	22, 31
Conread position:	10-134
Cow position:	chrX:6690353-6690479 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	101
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	21, 0
Conread position:	10-187
Cow position:	chrX:28845734-28845559 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	135
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	126, 46
Conread position:	10-209
Cow position:	chrX:8103199-8103401 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	145
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	29, 0
Conread position:	12-187
Cow position:	chrX:2300825-2300646 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	134
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	23, 0
Conread position:	13-134
Cow position:	chrX:6563403-6563281 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	98
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	19, 68
Conread position:	13-135
Cow position:	chrX:37910343-37910221 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	98
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	19, 38
Conread position:	13-187
Cow position:	chrX:2485743-2485916 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	126
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	123, 10
Conread position:	14-156
Cow position:	chrX:48536776-48536920 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	110
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	13, 84
Conread position:	14-179
Cow position:	chrX:40774584-40774745 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	123
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	26, 12
Conread position:	14-183
Cow position:	chrX:42874867-42874697 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	137
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	13, 95
Conread position:	14-185
Cow position:	chrX:42994502-42994331 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	139
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	10, 54
Conread position:	14-187
Cow position:	chrX:20340002-20340176 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	137
Alignm E-value:	9e-35
Alignm gaps (pig, cow):	14, 41
Conread position:	15-129
Cow position:	chrX:4865140-4865025 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	91
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	16, 0
Conread position:	15-161
Cow position:	chrX:20151741-20151591 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	122
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	18, 0
Conread position:	15-162
Cow position:	chrX:14973846-14973992 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	113
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	62, 38
Conread position:	15-187
Cow position:	chrX:40734029-40734200 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	137
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	17, 56
Conread position:	15-228
Cow position:	chrX:34270296-34270090 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	129
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	16, 89
Conread position:	17-126
Cow position:	chrX:6488469-6488363 (view UCSC Genome Browser custom track)
Alignm length:	110
Alignm identity:	92
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	15, 0