Cow genome map
| Conread name: | Ss1.1-Mixc-0026d05.3 |
| Conread position: | 2-132 |
| Cow position: | chrX:30962765-30962633 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-118 |
| Cow position: | chrX:35285286-35285402 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 3-124 |
| Cow position: | chrX:1996339-1996217 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 4-124 |
| Cow position: | chrX:27175112-27175234 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 9-123 |
| Cow position: | chrX:44040294-44040410 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 10-123 |
| Cow position: | chrX:29723869-29723984 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 12-116 |
| Cow position: | chrX:6559336-6559230 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-117 |
| Cow position: | chrX:37717842-37717949 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-118 |
| Cow position: | chrX:19356584-19356692 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-121 |
| Cow position: | chrX:8642165-8642276 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-121 |
| Cow position: | chrX:36283460-36283571 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 12-123 |
| Cow position: | chrX:12095651-12095538 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-125 |
| Cow position: | chrX:42449893-42449777 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-131 |
| Cow position: | chrX:27705707-27705828 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 12-132 |
| Cow position: | chrX:51780-51660 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 12-132 |
| Cow position: | chrX:597358-597237 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 12-132 |
| Cow position: | chrX:23185217-23185093 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-139 |
| Cow position: | chrX:11670807-11670936 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-144 |
| Cow position: | chrX:42247061-42246928 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 12-148 |
| Cow position: | chrX:34193960-34193822 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-159 |
| Cow position: | chrX:13122064-13122214 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 13-118 |
| Cow position: | chrX:40337033-40337139 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 13-132 |
| Cow position: | chrX:8759744-8759865 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 14-143 |
| Cow position: | chrX:34411969-34412101 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 14-143 |
| Cow position: | chrX:41215445-41215576 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 14-175 |
| Cow position: | chrX:28940368-28940533 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 15-126 |
| Cow position: | chrX:17524260-17524147 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.