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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0027f08.3
        

               
Conread position:
               
310-720
               

               
Cow position:
               
chr14:25979036-25979453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 28
               

               
Conread position:
               
331-719
               

               
Cow position:
               
chr14:21357340-21357736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
336-710
               

               
Cow position:
               
chr14:17013302-17013683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 252
               

               
Conread position:
               
337-528
               

               
Cow position:
               
chr14:25889882-25890075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
340-528
               

               
Cow position:
               
chr14:5044466-5044651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
341-720
               

               
Cow position:
               
chr14:4877439-4877045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 261
               

               
Conread position:
               
343-697
               

               
Cow position:
               
chr14:16344352-16344006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
344-719
               

               
Cow position:
               
chr14:1803328-1802930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
345-524
               

               
Cow position:
               
chr14:36723191-36723386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-710
               

               
Cow position:
               
chr14:20302214-20301833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
346-693
               

               
Cow position:
               
chr14:10609478-10609844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
347-715
               

               
Cow position:
               
chr14:45052234-45052624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
348-715
               

               
Cow position:
               
chr14:33774227-33773873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr14:15428279-15428515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
350-715
               

               
Cow position:
               
chr14:36289992-36289619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
351-574
               

               
Cow position:
               
chr14:13928384-13928602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
351-675
               

               
Cow position:
               
chr14:1708856-1708515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
352-709
               

               
Cow position:
               
chr14:12512086-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 16
               

               
Conread position:
               
353-637
               

               
Cow position:
               
chr14:13731296-13731001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 251
               

               
Conread position:
               
354-508
               

               
Cow position:
               
chr14:48249870-48249721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
355-627
               

               
Cow position:
               
chr14:34775943-34775654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
355-720
               

               
Cow position:
               
chr14:8848084-8848433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
356-470
               

               
Cow position:
               
chr14:17238109-17238222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
356-650
               

               
Cow position:
               
chr14:29964826-29965134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
356-694
               

               
Cow position:
               
chr14:5222481-5222128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
357-528
               

               
Cow position:
               
chr14:19988253-19988079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
357-672
               

               
Cow position:
               
chr14:48496342-48496010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
360-519
               

               
Cow position:
               
chr14:15782003-15781844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
361-515
               

               
Cow position:
               
chr14:10693784-10693629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
362-563
               

               
Cow position:
               
chr14:4481484-4481693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
362-715
               

               
Cow position:
               
chr14:28304975-28304608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
362-720
               

               
Cow position:
               
chr14:20110909-20110535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
363-574
               

               
Cow position:
               
chr14:35651968-35651752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr14:20577133-20576896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
363-715
               

               
Cow position:
               
chr14:16237699-16237325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
364-574
               

               
Cow position:
               
chr14:20234377-20234160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
365-578
               

               
Cow position:
               
chr14:11472418-11472189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
366-574
               

               
Cow position:
               
chr14:20915164-20914944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
366-715
               

               
Cow position:
               
chr14:20667191-20666843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr14:41871775-41871607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
367-531
               

               
Cow position:
               
chr14:11981276-11981448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 152
               

               
Conread position:
               
367-695
               

               
Cow position:
               
chr14:26222554-26222906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
367-719
               

               
Cow position:
               
chr14:25986328-25986702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr14:21946206-21946372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
368-669
               

               
Cow position:
               
chr14:12855972-12855658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
368-715
               

               
Cow position:
               
chr14:32452071-32452434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
368-715
               

               
Cow position:
               
chr14:35381400-35381771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
368-720
               

               
Cow position:
               
chr14:38747495-38747851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
369-610
               

               
Cow position:
               
chr14:36425588-36425339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
370-517
               

               
Cow position:
               
chr14:19355111-19355256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr14:36559408-36559246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
370-694
               

               
Cow position:
               
chr14:45045418-45045762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
370-710
               

               
Cow position:
               
chr14:37103026-37103386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 301
               

               
Conread position:
               
371-563
               

               
Cow position:
               
chr14:50325818-50326011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
371-689
               

               
Cow position:
               
chr14:30756662-30756998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
371-719
               

               
Cow position:
               
chr14:27338157-27338529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
372-641
               

               
Cow position:
               
chr14:7342282-7342561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
372-716
               

               
Cow position:
               
chr14:31130558-31130198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 261
               

               
Conread position:
               
373-591
               

               
Cow position:
               
chr14:20245348-20245115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
373-663
               

               
Cow position:
               
chr14:11285394-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
373-715
               

               
Cow position:
               
chr14:36555307-36554974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
374-539
               

               
Cow position:
               
chr14:25517126-25516955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
374-574
               

               
Cow position:
               
chr14:45955109-45955314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 173
               

               
Conread position:
               
374-715
               

               
Cow position:
               
chr14:12037004-12036664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
374-715
               

               
Cow position:
               
chr14:47673058-47672704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
374-720
               

               
Cow position:
               
chr14:3004633-3004988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
375-708
               

               
Cow position:
               
chr14:40754417-40754064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr14:13845819-13846168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr14:27919911-27919556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 271
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr14:38168526-38168862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
376-510
               

               
Cow position:
               
chr14:21427395-21427264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr14:39097329-39097488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr14:40952088-40952251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
376-574
               

               
Cow position:
               
chr14:23237840-23237637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
376-686
               

               
Cow position:
               
chr14:12244558-12244229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
376-689
               

               
Cow position:
               
chr14:12546729-12546430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
376-694
               

               
Cow position:
               
chr14:20016888-20016545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 338
               

               
Conread position:
               
376-714
               

               
Cow position:
               
chr14:27076790-27077165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 317
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr14:16550166-16549823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr14:19594307-19593955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr14:20640805-20640446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 330
               

               
Conread position:
               
376-719
               

               
Cow position:
               
chr14:20932448-20932800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr14:20321243-20320906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr14:33791017-33791374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
377-566
               

               
Cow position:
               
chr14:34697301-34697497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
377-661
               

               
Cow position:
               
chr14:12081301-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
377-720
               

               
Cow position:
               
chr14:5235055-5234696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
378-715
               

               
Cow position:
               
chr14:46973267-46973618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
379-574
               

               
Cow position:
               
chr14:23419622-23419831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
379-640
               

               
Cow position:
               
chr14:7198325-7198610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
379-700
               

               
Cow position:
               
chr14:50362621-50362959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
379-709
               

               
Cow position:
               
chr14:8946257-8945906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
379-710
               

               
Cow position:
               
chr14:33341578-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
379-713
               

               
Cow position:
               
chr14:45677059-45677402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 282
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr14:4025160-4024817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr14:4996943-4997307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr14:8867734-8867377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr14:19321681-19321321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
380-668
               

               
Cow position:
               
chr14:33229570-33229261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
380-693
               

               
Cow position:
               
chr14:21535475-21535161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 202
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr14:18309474-18309118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
380-719
               

               
Cow position:
               
chr14:46965428-46965744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
381-475
               

               
Cow position:
               
chr14:25268178-25268084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
381-481
               

               
Cow position:
               
chr14:20388514-20388413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr14:12071698-12071544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
381-573
               

               
Cow position:
               
chr14:48829906-48829707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr14:27364408-27364610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
381-583
               

               
Cow position:
               
chr14:11079283-11079495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
381-590
               

               
Cow position:
               
chr14:11576899-11577121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
381-638
               

               
Cow position:
               
chr14:23104166-23103891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr14:45312628-45312934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
381-677
               

               
Cow position:
               
chr14:1778020-1777702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
381-685
               

               
Cow position:
               
chr14:11056903-11056588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
381-692
               

               
Cow position:
               
chr14:35498666-35498343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
381-699
               

               
Cow position:
               
chr14:18941458-18941137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr14:14949384-14949034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr14:28987519-28987868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 193
               

               
Conread position:
               
381-711
               

               
Cow position:
               
chr14:39918905-39918586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr14:16256604-16256947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
150, 103
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr14:16297622-16297957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr14:18345895-18345553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr14:39770389-39770052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
381-717
               

               
Cow position:
               
chr14:17554664-17554308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr14:1715558-1715917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr14:20010484-20010123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
75, 71
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr14:20826321-20826661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 202
               

               
Conread position:
               
382-470
               

               
Cow position:
               
chr14:33326802-33326711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
382-517
               

               
Cow position:
               
chr14:36984555-36984688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
382-527
               

               
Cow position:
               
chr14:29282584-29282734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
382-642
               

               
Cow position:
               
chr14:8949483-8949750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
382-649
               

               
Cow position:
               
chr14:40208739-40209016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
382-664
               

               
Cow position:
               
chr14:47170519-47170221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
382-685
               

               
Cow position:
               
chr14:6541898-6541572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
382-695
               

               
Cow position:
               
chr14:26655305-26654971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
382-695
               

               
Cow position:
               
chr14:28378182-28378522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
382-714
               

               
Cow position:
               
chr14:48689359-48689706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
383-566
               

               
Cow position:
               
chr14:5668289-5668093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
383-636
               

               
Cow position:
               
chr14:11643413-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
383-689
               

               
Cow position:
               
chr14:10078086-10078425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
383-700
               

               
Cow position:
               
chr14:35503197-35503529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
384-529
               

               
Cow position:
               
chr14:10838696-10838841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
384-579
               

               
Cow position:
               
chr14:23465220-23465010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
384-694
               

               
Cow position:
               
chr14:22941908-22941561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
384-698
               

               
Cow position:
               
chr14:29592882-29592559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
384-699
               

               
Cow position:
               
chr14:17755409-17755726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
386-558
               

               
Cow position:
               
chr14:21966041-21965871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
386-633
               

               
Cow position:
               
chr14:24749296-24749536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
190, 37
               

               
Conread position:
               
386-699
               

               
Cow position:
               
chr14:13582920-13582588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 313
               

               
Conread position:
               
386-709
               

               
Cow position:
               
chr14:11810725-11810396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
386-710
               

               
Cow position:
               
chr14:27157653-27157328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
386-715
               

               
Cow position:
               
chr14:39434418-39434079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
387-655
               

               
Cow position:
               
chr14:36443181-36442895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
388-520
               

               
Cow position:
               
chr14:39795459-39795591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
389-683
               

               
Cow position:
               
chr14:5025117-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 5
               

               
Conread position:
               
389-710
               

               
Cow position:
               
chr14:3868593-3868250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
66, 265
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr14:11846335-11846679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 250
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr14:15492429-15492777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
390-574
               

               
Cow position:
               
chr14:18412755-18412558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
390-698
               

               
Cow position:
               
chr14:14979869-14979539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
390-699
               

               
Cow position:
               
chr14:41809815-41809488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr14:14182190-14182526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
390-720
               

               
Cow position:
               
chr14:22988874-22989220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
80, 316
               

               
Conread position:
               
390-720
               

               
Cow position:
               
chr14:25681758-25682118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
391-483
               

               
Cow position:
               
chr14:8828392-8828484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
391-491
               

               
Cow position:
               
chr14:38411145-38411245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr14:12137857-12137997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr14:21593161-21593023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
391-552
               

               
Cow position:
               
chr14:35421247-35421075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
391-558
               

               
Cow position:
               
chr14:24754790-24754966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 169
               

               
Conread position:
               
391-562
               

               
Cow position:
               
chr14:30023360-30023176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-563
               

               
Cow position:
               
chr14:10920728-10920541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-573
               

               
Cow position:
               
chr14:49940853-49941043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr14:46431907-46432102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr14:48884988-48884801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr14:13516152-13515957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-578
               

               
Cow position:
               
chr14:8083036-8083234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
391-586
               

               
Cow position:
               
chr14:15211774-15211975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
138, 120
               

               
Conread position:
               
391-587
               

               
Cow position:
               
chr14:18270200-18270404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 192
               

               
Conread position:
               
391-609
               

               
Cow position:
               
chr14:21224483-21224709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
391-635
               

               
Cow position:
               
chr14:44713256-44713518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 229
               

               
Conread position:
               
391-650
               

               
Cow position:
               
chr14:28465378-28465101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 220
               

               
Conread position:
               
391-652
               

               
Cow position:
               
chr14:49713820-49714098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
391-654
               

               
Cow position:
               
chr14:10693417-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 232
               

               
Conread position:
               
391-654
               

               
Cow position:
               
chr14:39414998-39415279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
391-660
               

               
Cow position:
               
chr14:38550641-38550356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 179
               

               
Conread position:
               
391-665
               

               
Cow position:
               
chr14:15944827-15944536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
391-668
               

               
Cow position:
               
chr14:41706425-41706144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 191
               

               
Conread position:
               
391-678
               

               
Cow position:
               
chr14:28153905-28153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 233
               

               
Conread position:
               
391-681
               

               
Cow position:
               
chr14:7290639-7290946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr14:10387498-10387799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr14:37446834-37446523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr14:6600112-6599786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr14:48492959-48492622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
391-702
               

               
Cow position:
               
chr14:40329279-40329612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 287
               

               
Conread position:
               
391-708
               

               
Cow position:
               
chr14:47276861-47276530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:6490863-6490527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 199
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:15313398-15313730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 276
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:18485415-18485068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:19851188-19850852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:21201980-21201659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:24921938-24922279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr14:36437649-36437311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 299
               

               
Conread position:
               
391-711
               

               
Cow position:
               
chr14:38144270-38143935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 287
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:4227383-4227022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:13385206-13385551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:13809794-13810119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:19740406-19740087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 150
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:21284493-21284808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:35420922-35420580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr14:42330186-42330532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
391-719
               

               
Cow position:
               
chr14:12961438-12961756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr14:12667569-12667920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
392-621
               

               
Cow position:
               
chr14:8923746-8923502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr14:8541366-8541029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr14:28115349-28115005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
392-720
               

               
Cow position:
               
chr14:10858281-10858618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
393-578
               

               
Cow position:
               
chr14:33328807-33328997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
393-590
               

               
Cow position:
               
chr14:23078950-23078739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
393-698
               

               
Cow position:
               
chr14:7799759-7800079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
393-710
               

               
Cow position:
               
chr14:49824771-49824450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
393-712
               

               
Cow position:
               
chr14:49817844-49817522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 237
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr14:15997910-15997586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
393-719
               

               
Cow position:
               
chr14:2975244-2974910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 264
               

               
Conread position:
               
393-719
               

               
Cow position:
               
chr14:26115900-26116246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
394-491
               

               
Cow position:
               
chr14:28306374-28306473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
394-515
               

               
Cow position:
               
chr14:6389040-6388918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr14:8591002-8590868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr14:21968665-21968529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr14:25912497-25912631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr14:36151167-36151305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
394-562
               

               
Cow position:
               
chr14:37152092-37151919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
394-567
               

               
Cow position:
               
chr14:41623169-41623344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
394-568
               

               
Cow position:
               
chr14:10937513-10937700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr14:7127703-7127891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr14:40347799-40347613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr14:50519334-50519146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
394-586
               

               
Cow position:
               
chr14:18559214-18559012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 99
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr14:11729264-11729057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr14:20466779-20466983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
394-642
               

               
Cow position:
               
chr14:27999196-27998932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
394-649
               

               
Cow position:
               
chr14:3498656-3498922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
394-655
               

               
Cow position:
               
chr14:41267880-41267629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
394-675
               

               
Cow position:
               
chr14:12635034-12634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
394-685
               

               
Cow position:
               
chr14:7036517-7036203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
394-685
               

               
Cow position:
               
chr14:12954532-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
394-708
               

               
Cow position:
               
chr14:38529822-38530140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
394-711
               

               
Cow position:
               
chr14:36166783-36167115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
394-712
               

               
Cow position:
               
chr14:23424107-23424435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
394-712
               

               
Cow position:
               
chr14:23442868-23443196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:13042602-13042937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 223
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:14466617-14466297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:20712839-20712506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:25386024-25385707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:33457202-33456859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 235
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:37679141-37678821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:38355051-38355366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:38920800-38921130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:40230792-40230457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr14:41749913-41749577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
135, 311
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr14:21933502-21933156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 269
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr14:24236665-24237010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
63, 269
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr14:49022037-49021716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr14:50589547-50589198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
395-615
               

               
Cow position:
               
chr14:28924009-28924249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
395-694
               

               
Cow position:
               
chr14:27823276-27823592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
395-715
               

               
Cow position:
               
chr14:12342998-12342637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 359
               

               
Conread position:
               
395-715
               

               
Cow position:
               
chr14:41210708-41211034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
395-715
               

               
Cow position:
               
chr14:41966069-41966421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 249
               

               
Conread position:
               
397-658
               

               
Cow position:
               
chr14:4282664-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
397-683
               

               
Cow position:
               
chr14:11470304-11469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
397-700
               

               
Cow position:
               
chr14:13006370-13006672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
397-710
               

               
Cow position:
               
chr14:11043648-11043317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 278
               

               
Conread position:
               
397-713
               

               
Cow position:
               
chr14:1868942-1868623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
398-528
               

               
Cow position:
               
chr14:40806751-40806631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
398-528
               

               
Cow position:
               
chr14:49501161-49501026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
398-565
               

               
Cow position:
               
chr14:18112744-18112569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr14:24785506-24785689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
398-588
               

               
Cow position:
               
chr14:27733455-27733653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
398-637
               

               
Cow position:
               
chr14:49487811-49488065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
398-646
               

               
Cow position:
               
chr14:27394617-27394350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
398-663
               

               
Cow position:
               
chr14:16352205-16352475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
398-665
               

               
Cow position:
               
chr14:25903379-25903659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
398-671
               

               
Cow position:
               
chr14:40474409-40474699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 158
               

               
Conread position:
               
398-684
               

               
Cow position:
               
chr14:37422926-37422637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
398-685
               

               
Cow position:
               
chr14:41253132-41252837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
398-693
               

               
Cow position:
               
chr14:15504310-15504000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
398-698
               

               
Cow position:
               
chr14:9019888-9020191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
398-703
               

               
Cow position:
               
chr14:23682114-23682432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
398-711
               

               
Cow position:
               
chr14:44084629-44084302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
398-711
               

               
Cow position:
               
chr14:48741019-48740694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
398-712
               

               
Cow position:
               
chr14:19852089-19851756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:5630015-5630342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 78
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:6736021-6735679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:8786690-8786370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:10721855-10721548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
131, 91
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:14622321-14621993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr14:39037086-39037417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 61
               

               
Conread position:
               
398-716
               

               
Cow position:
               
chr14:21691410-21691091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr14:43046023-43046334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr14:33714827-33714497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 270
               

               
Conread position:
               
399-581
               

               
Cow position:
               
chr14:7316641-7316836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
399-684
               

               
Cow position:
               
chr14:42419431-42419124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr14:48426920-48427254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 307
               

               
Conread position:
               
399-719
               

               
Cow position:
               
chr14:23080906-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
400-574
               

               
Cow position:
               
chr14:24991346-24991514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
400-703
               

               
Cow position:
               
chr14:41329860-41329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
403-694
               

               
Cow position:
               
chr14:41302991-41302672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 309
               

               
Conread position:
               
403-715
               

               
Cow position:
               
chr14:36254837-36254526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
404-655
               

               
Cow position:
               
chr14:1796050-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
405-658
               

               
Cow position:
               
chr14:7695118-7695392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
405-715
               

               
Cow position:
               
chr14:33247566-33247252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
406-646
               

               
Cow position:
               
chr14:37901855-37902113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
406-697
               

               
Cow position:
               
chr14:46997907-46998209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
406-700
               

               
Cow position:
               
chr14:3949249-3948935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr14:44742517-44742201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
406-719
               

               
Cow position:
               
chr14:12520449-12520123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 271
               

               
Conread position:
               
406-720
               

               
Cow position:
               
chr14:42246859-42247175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
407-641
               

               
Cow position:
               
chr14:48744371-48744621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
407-651
               

               
Cow position:
               
chr14:25381296-25381539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
407-715
               

               
Cow position:
               
chr14:4203236-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
407-715
               

               
Cow position:
               
chr14:7959654-7959952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
408-708
               

               
Cow position:
               
chr14:24387308-24387622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
408-715
               

               
Cow position:
               
chr14:40165286-40165603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
408-720
               

               
Cow position:
               
chr14:8101654-8101975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
409-661
               

               
Cow position:
               
chr14:12127539-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
409-719
               

               
Cow position:
               
chr14:46685156-46685483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
410-715
               

               
Cow position:
               
chr14:1646325-1646011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
410-719
               

               
Cow position:
               
chr14:26628667-26628339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
411-715
               

               
Cow position:
               
chr14:18904728-18904430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
415-655
               

               
Cow position:
               
chr14:40875875-40876105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
172, 55
               

               
Conread position:
               
423-537
               

               
Cow position:
               
chr14:25277645-25277761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
424-715
               

               
Cow position:
               
chr14:41127779-41128074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
135, 176
               

               
Conread position:
               
430-710
               

               
Cow position:
               
chr14:106683-106402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
431-715
               

               
Cow position:
               
chr14:37447588-37447288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
431-720
               

               
Cow position:
               
chr14:1859723-1859429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
432-715
               

               
Cow position:
               
chr14:19618871-19618571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
432-719
               

               
Cow position:
               
chr14:41479782-41479475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
446-720
               

               
Cow position:
               
chr14:6175497-6175768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
449-717
               

               
Cow position:
               
chr14:19863535-19863254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 237
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr14:45605011-45605256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr14:9901093-9901352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr14:24607883-24608147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 121
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr14:39618467-39618194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 163
               

               
Conread position:
               
457-716
               

               
Cow position:
               
chr14:18657696-18657421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
457-719
               

               
Cow position:
               
chr14:15825190-15825470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
457-719
               

               
Cow position:
               
chr14:28091052-28090790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
457-719
               

               
Cow position:
               
chr14:33830213-33830482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
457-720
               

               
Cow position:
               
chr14:37131571-37131843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
458-703
               

               
Cow position:
               
chr14:20600295-20600555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 187
               

               
Conread position:
               
459-720
               

               
Cow position:
               
chr14:34983778-34984049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
460-688
               

               
Cow position:
               
chr14:19951478-19951724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-693
               

               
Cow position:
               
chr14:42436937-42437186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-694
               

               
Cow position:
               
chr14:26097781-26097535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 211
               

               
Conread position:
               
460-699
               

               
Cow position:
               
chr14:36453706-36453465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr14:4990918-4991179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr14:19129418-19129692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr14:23761802-23762060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
460-718
               

               
Cow position:
               
chr14:44848458-44848187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 213
               

               
Conread position:
               
461-715
               

               
Cow position:
               
chr14:19394274-19394541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
462-715
               

               
Cow position:
               
chr14:48961495-48961760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
464-663
               

               
Cow position:
               
chr14:34331410-34331197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 194
               

               
Conread position:
               
464-685
               

               
Cow position:
               
chr14:18763516-18763293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
464-693
               

               
Cow position:
               
chr14:14316805-14317041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
464-699
               

               
Cow position:
               
chr14:34199925-34199684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
464-720
               

               
Cow position:
               
chr14:37884000-37883730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 208
               

               
Conread position:
               
465-688
               

               
Cow position:
               
chr14:6226696-6226472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
465-699
               

               
Cow position:
               
chr14:46654624-46654380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
465-702
               

               
Cow position:
               
chr14:26490825-26490574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
465-711
               

               
Cow position:
               
chr14:12035328-12035585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
465-714
               

               
Cow position:
               
chr14:25779020-25779271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr14:16032929-16033189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
111, 235
               

               
Conread position:
               
466-708
               

               
Cow position:
               
chr14:40283536-40283788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 183
               

               
Conread position:
               
466-711
               

               
Cow position:
               
chr14:40432843-40433097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
466-715
               

               
Cow position:
               
chr14:24981377-24981638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
467-634
               

               
Cow position:
               
chr14:3943631-3943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
467-715
               

               
Cow position:
               
chr14:1868464-1868202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 154
               

               
Conread position:
               
468-714
               

               
Cow position:
               
chr14:21964057-21964301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
471-694
               

               
Cow position:
               
chr14:27275086-27275322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
476-719
               

               
Cow position:
               
chr14:45718335-45718080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
477-715
               

               
Cow position:
               
chr14:17841362-17841108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 231
               

               
Conread position:
               
478-702
               

               
Cow position:
               
chr14:33309573-33309339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
478-713
               

               
Cow position:
               
chr14:44878841-44878608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
479-715
               

               
Cow position:
               
chr14:35018822-35018574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 173
               

               
Conread position:
               
479-720
               

               
Cow position:
               
chr14:49086238-49086494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
480-715
               

               
Cow position:
               
chr14:48412950-48412699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 228
               

               
Conread position:
               
481-720
               

               
Cow position:
               
chr14:50055332-50055584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
485-664
               

               
Cow position:
               
chr14:23478764-23478951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
485-715
               

               
Cow position:
               
chr14:20385048-20384802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 221
               

               
Conread position:
               
485-715
               

               
Cow position:
               
chr14:30661935-30662168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
486-719
               

               
Cow position:
               
chr14:25403997-25403756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
498-715
               

               
Cow position:
               
chr14:22966706-22966934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
525-695
               

               
Cow position:
               
chr14:32553322-32553147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
525-711
               

               
Cow position:
               
chr14:43249572-43249759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr14:3564268-3564456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr14:29029813-29030012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
525-719
               

               
Cow position:
               
chr14:20468111-20467920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
164, 51
               

               
Conread position:
               
525-720
               

               
Cow position:
               
chr14:25231666-25231459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
528-719
               

               
Cow position:
               
chr14:26191117-26190914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 151
               

               
Conread position:
               
529-703
               

               
Cow position:
               
chr14:5572931-5573112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
529-715
               

               
Cow position:
               
chr14:47584669-47584472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
534-719
               

               
Cow position:
               
chr14:10702837-10702648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
535-715
               

               
Cow position:
               
chr14:33828156-33828342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
536-710
               

               
Cow position:
               
chr14:12324414-12324601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
536-715
               

               
Cow position:
               
chr14:27591962-27591773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
536-715
               

               
Cow position:
               
chr14:33326400-33326211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
536-715
               

               
Cow position:
               
chr14:33538941-33538739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
539-714
               

               
Cow position:
               
chr14:15913541-15913367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
541-715
               

               
Cow position:
               
chr14:33643776-33643601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
543-720
               

               
Cow position:
               
chr14:31734853-31734660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
544-706
               

               
Cow position:
               
chr14:41756267-41756432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
557-715
               

               
Cow position:
               
chr14:14580887-14581047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
560-700
               

               
Cow position:
               
chr14:16761548-16761407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
560-703
               

               
Cow position:
               
chr14:3836142-3836284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
563-720
               

               
Cow position:
               
chr14:50518945-50518788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
569-714
               

               
Cow position:
               
chr14:19624116-19624266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
571-714
               

               
Cow position:
               
chr14:11748876-11748736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
571-714
               

               
Cow position:
               
chr14:24991856-24992003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr14:27312457-27312607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr14:38673598-38673450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
571-720
               

               
Cow position:
               
chr14:40347127-40346976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 124
               

               
Conread position:
               
574-711
               

               
Cow position:
               
chr14:39422556-39422413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
575-715
               

               
Cow position:
               
chr14:21230641-21230785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
576-719
               

               
Cow position:
               
chr14:24785984-24786126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
578-703
               

               
Cow position:
               
chr14:37467721-37467592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
580-689
               

               
Cow position:
               
chr14:35021942-35022052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr14:34355645-34355512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
582-720
               

               
Cow position:
               
chr14:12250144-12250007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
583-709
               

               
Cow position:
               
chr14:26456562-26456685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
583-710
               

               
Cow position:
               
chr14:37435250-37435120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
587-715
               

               
Cow position:
               
chr14:19221935-19222063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
598-719
               

               
Cow position:
               
chr14:4109409-4109291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
600-715
               

               
Cow position:
               
chr14:15518314-15518197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
605-711
               

               
Cow position:
               
chr14:12614023-12613916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
606-715
               

               
Cow position:
               
chr14:28924458-28924567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
615-715
               

               
Cow position:
               
chr14:46735386-46735490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
622-719
               

               
Cow position:
               
chr14:8936562-8936463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               
Show alignments to all cow chromosomes.