• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0027f08.3
        

               
Conread position:
               
313-563
               

               
Cow position:
               
chr23:13132757-13132511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
319-527
               

               
Cow position:
               
chr23:21539436-21539220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
322-562
               

               
Cow position:
               
chr23:13553422-13553678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
338-517
               

               
Cow position:
               
chr23:2801174-2801354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
341-713
               

               
Cow position:
               
chr23:16744797-16744413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
342-703
               

               
Cow position:
               
chr23:9942398-9942767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
345-481
               

               
Cow position:
               
chr23:22207925-22207787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
346-528
               

               
Cow position:
               
chr23:4338100-4338282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
346-531
               

               
Cow position:
               
chr23:5603497-5603684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
346-578
               

               
Cow position:
               
chr23:3205035-3204786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
347-719
               

               
Cow position:
               
chr23:29801693-29801291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
349-556
               

               
Cow position:
               
chr23:17792175-17792395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr23:9387784-9387999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr23:30244775-30244532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
349-715
               

               
Cow position:
               
chr23:3247836-3247448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
350-693
               

               
Cow position:
               
chr23:39573018-39573372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
350-715
               

               
Cow position:
               
chr23:5617819-5617439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
350-715
               

               
Cow position:
               
chr23:39778636-39778269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
353-720
               

               
Cow position:
               
chr23:15286912-15287272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
355-720
               

               
Cow position:
               
chr23:29243173-29242806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 115
               

               
Conread position:
               
356-590
               

               
Cow position:
               
chr23:1194256-1194500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
356-595
               

               
Cow position:
               
chr23:32621531-32621270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
357-591
               

               
Cow position:
               
chr23:40737779-40738028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
358-650
               

               
Cow position:
               
chr23:18748841-18749138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
360-715
               

               
Cow position:
               
chr23:21765149-21764781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
361-689
               

               
Cow position:
               
chr23:20557605-20557957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
364-567
               

               
Cow position:
               
chr23:39125186-39125408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
364-686
               

               
Cow position:
               
chr23:11212736-11212397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
364-719
               

               
Cow position:
               
chr23:25675465-25675836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
365-573
               

               
Cow position:
               
chr23:33232471-33232689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
366-554
               

               
Cow position:
               
chr23:35718537-35718344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
366-661
               

               
Cow position:
               
chr23:19872470-19872758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 53
               

               
Conread position:
               
368-506
               

               
Cow position:
               
chr23:23033314-23033446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
368-567
               

               
Cow position:
               
chr23:27849220-27849015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
368-576
               

               
Cow position:
               
chr23:30867072-30867289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
368-665
               

               
Cow position:
               
chr23:20539608-20539295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
368-702
               

               
Cow position:
               
chr23:1942962-1942604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
368-703
               

               
Cow position:
               
chr23:36172757-36172397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
370-567
               

               
Cow position:
               
chr23:1719883-1719680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 175
               

               
Conread position:
               
371-555
               

               
Cow position:
               
chr23:5642133-5642330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
371-656
               

               
Cow position:
               
chr23:11225079-11224779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
99, 280
               

               
Conread position:
               
372-568
               

               
Cow position:
               
chr23:41107794-41108003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
372-654
               

               
Cow position:
               
chr23:5881299-5881595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
372-715
               

               
Cow position:
               
chr23:534449-534092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
373-532
               

               
Cow position:
               
chr23:15056353-15056511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
373-552
               

               
Cow position:
               
chr23:2111003-2110816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
373-558
               

               
Cow position:
               
chr23:4291582-4291382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
374-528
               

               
Cow position:
               
chr23:34264533-34264687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
374-574
               

               
Cow position:
               
chr23:18739238-18739453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
374-715
               

               
Cow position:
               
chr23:799444-799804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 244
               

               
Conread position:
               
375-528
               

               
Cow position:
               
chr23:35527301-35527144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
375-574
               

               
Cow position:
               
chr23:1798341-1798122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
375-574
               

               
Cow position:
               
chr23:22826234-22826429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
375-583
               

               
Cow position:
               
chr23:1954497-1954282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
375-694
               

               
Cow position:
               
chr23:34356862-34356527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 252
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr23:12363398-12363755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 332
               

               
Conread position:
               
375-720
               

               
Cow position:
               
chr23:13520664-13520309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
376-505
               

               
Cow position:
               
chr23:1739676-1739542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
376-515
               

               
Cow position:
               
chr23:1490575-1490438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
376-562
               

               
Cow position:
               
chr23:18489874-18489680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
376-572
               

               
Cow position:
               
chr23:11369440-11369242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
376-576
               

               
Cow position:
               
chr23:27026871-27027080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
376-633
               

               
Cow position:
               
chr23:26283937-26283669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
376-640
               

               
Cow position:
               
chr23:35965367-35965080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
376-652
               

               
Cow position:
               
chr23:41348409-41348702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
376-659
               

               
Cow position:
               
chr23:4646728-4646429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
376-661
               

               
Cow position:
               
chr23:16780332-16780633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
376-683
               

               
Cow position:
               
chr23:40348427-40348747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
376-700
               

               
Cow position:
               
chr23:35239573-35239227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
376-702
               

               
Cow position:
               
chr23:9226494-9226150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
376-703
               

               
Cow position:
               
chr23:5190890-5191223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
376-706
               

               
Cow position:
               
chr23:3190908-3191251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr23:5426660-5426294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 341
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr23:18322226-18322553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr23:18901847-18902184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
376-719
               

               
Cow position:
               
chr23:16689847-16690198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr23:21788549-21788909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
377-719
               

               
Cow position:
               
chr23:11129456-11129096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
378-517
               

               
Cow position:
               
chr23:24718584-24718726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
379-515
               

               
Cow position:
               
chr23:2563883-2563740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr23:18691957-18692106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-689
               

               
Cow position:
               
chr23:4904111-4903782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
379-699
               

               
Cow position:
               
chr23:11081474-11081137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr23:33711980-33711621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
380-528
               

               
Cow position:
               
chr23:3270514-3270363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
380-528
               

               
Cow position:
               
chr23:4521665-4521820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
380-578
               

               
Cow position:
               
chr23:1661418-1661611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
380-694
               

               
Cow position:
               
chr23:306741-306408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 298
               

               
Conread position:
               
380-709
               

               
Cow position:
               
chr23:1536531-1536193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr23:24983973-24984307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
381-516
               

               
Cow position:
               
chr23:23103111-23103250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
381-572
               

               
Cow position:
               
chr23:7155485-7155679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr23:10888482-10888286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
381-578
               

               
Cow position:
               
chr23:809721-809513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
381-578
               

               
Cow position:
               
chr23:33434877-33434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
381-582
               

               
Cow position:
               
chr23:16664191-16664396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
381-618
               

               
Cow position:
               
chr23:36200617-36200374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
381-649
               

               
Cow position:
               
chr23:39302908-39302630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
381-650
               

               
Cow position:
               
chr23:20397252-20397530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
381-709
               

               
Cow position:
               
chr23:29345560-29345887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
381-714
               

               
Cow position:
               
chr23:5436790-5437134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
381-714
               

               
Cow position:
               
chr23:12091145-12091495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr23:40444070-40443732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
381-717
               

               
Cow position:
               
chr23:8923814-8923468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 298
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr23:40081715-40081391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr23:38245-37893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr23:8063745-8063413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr23:32106083-32105728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
382-573
               

               
Cow position:
               
chr23:29330523-29330320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
382-576
               

               
Cow position:
               
chr23:4042664-4042473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
382-600
               

               
Cow position:
               
chr23:9220618-9220395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
382-715
               

               
Cow position:
               
chr23:8698639-8698310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 229
               

               
Conread position:
               
382-715
               

               
Cow position:
               
chr23:22530223-22530551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
75, 205
               

               
Conread position:
               
382-720
               

               
Cow position:
               
chr23:33570344-33569995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
382-720
               

               
Cow position:
               
chr23:40778476-40778124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
383-711
               

               
Cow position:
               
chr23:9652296-9652611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
383-718
               

               
Cow position:
               
chr23:1337095-1337441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
384-528
               

               
Cow position:
               
chr23:2186849-2187000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
384-528
               

               
Cow position:
               
chr23:16479913-16480057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
384-679
               

               
Cow position:
               
chr23:34314740-34315058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
384-697
               

               
Cow position:
               
chr23:16797599-16797929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
384-715
               

               
Cow position:
               
chr23:9734634-9734277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 189
               

               
Conread position:
               
385-514
               

               
Cow position:
               
chr23:22651610-22651485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
385-528
               

               
Cow position:
               
chr23:21664513-21664369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
386-510
               

               
Cow position:
               
chr23:28814589-28814459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
386-531
               

               
Cow position:
               
chr23:3982970-3983129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
386-579
               

               
Cow position:
               
chr23:37948899-37948693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
386-664
               

               
Cow position:
               
chr23:385097-385399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
386-703
               

               
Cow position:
               
chr23:22396245-22396570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
386-710
               

               
Cow position:
               
chr23:5869980-5870314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 220
               

               
Conread position:
               
386-720
               

               
Cow position:
               
chr23:2417633-2417311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr23:2281979-2282311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
388-699
               

               
Cow position:
               
chr23:29786135-29786471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
389-527
               

               
Cow position:
               
chr23:9876792-9876933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
389-664
               

               
Cow position:
               
chr23:3293895-3293605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
389-692
               

               
Cow position:
               
chr23:1743993-1743694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
389-703
               

               
Cow position:
               
chr23:16848179-16847841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 266
               

               
Conread position:
               
390-576
               

               
Cow position:
               
chr23:13137733-13137926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
390-648
               

               
Cow position:
               
chr23:16961492-16961225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
390-686
               

               
Cow position:
               
chr23:6035615-6035333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
390-703
               

               
Cow position:
               
chr23:4810945-4810625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 199
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr23:12148089-12147789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
299, 62
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr23:25864488-25864824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
391-517
               

               
Cow position:
               
chr23:1648044-1647915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
391-527
               

               
Cow position:
               
chr23:4803168-4803024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
391-527
               

               
Cow position:
               
chr23:27307953-27307811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr23:4465758-4465902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr23:22205395-22205526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr23:38738520-38738378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
391-529
               

               
Cow position:
               
chr23:18387382-18387527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
391-554
               

               
Cow position:
               
chr23:30617271-30617447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-561
               

               
Cow position:
               
chr23:17462797-17462614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
391-567
               

               
Cow position:
               
chr23:4416080-4416269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-567
               

               
Cow position:
               
chr23:39056963-39056772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
391-569
               

               
Cow position:
               
chr23:28580377-28580570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr23:7856967-7856769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
391-582
               

               
Cow position:
               
chr23:4003854-4003650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-590
               

               
Cow position:
               
chr23:2471210-2470994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-590
               

               
Cow position:
               
chr23:5686431-5686630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
391-639
               

               
Cow position:
               
chr23:18384924-18384660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-663
               

               
Cow position:
               
chr23:27859996-27859710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 217
               

               
Conread position:
               
391-678
               

               
Cow position:
               
chr23:1614452-1614756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 283
               

               
Conread position:
               
391-685
               

               
Cow position:
               
chr23:19173151-19173460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 216
               

               
Conread position:
               
391-693
               

               
Cow position:
               
chr23:307663-307342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 287
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr23:1656099-1655778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr23:3244710-3245032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr23:5436435-5436757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 275
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr23:14394873-14394553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr23:10829374-10829703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 273
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr23:12471135-12470817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr23:30827555-30827869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
391-703
               

               
Cow position:
               
chr23:39340208-39339883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 202
               

               
Conread position:
               
391-705
               

               
Cow position:
               
chr23:26794708-26795036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 282
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:2316985-2316664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
138, 60
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:8837485-8837820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:10084979-10085316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:18802062-18802405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
68, 316
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:24929864-24930201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 276
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:25557083-25556763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 195
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:31601245-31601586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr23:34416773-34416429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 254
               

               
Conread position:
               
391-711
               

               
Cow position:
               
chr23:7175822-7175487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
391-714
               

               
Cow position:
               
chr23:187384-187042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 320
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr23:12334427-12334072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 330
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr23:33152990-33153333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr23:39813707-39813363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 259
               

               
Conread position:
               
392-562
               

               
Cow position:
               
chr23:23104286-23104463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
392-641
               

               
Cow position:
               
chr23:7709986-7709728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
392-693
               

               
Cow position:
               
chr23:16582702-16583024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
392-699
               

               
Cow position:
               
chr23:40790170-40789857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
392-702
               

               
Cow position:
               
chr23:1438482-1438173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
392-710
               

               
Cow position:
               
chr23:4995892-4996232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 189
               

               
Conread position:
               
392-720
               

               
Cow position:
               
chr23:5162645-5162284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
393-520
               

               
Cow position:
               
chr23:40137760-40137635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
393-659
               

               
Cow position:
               
chr23:22297827-22298117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
393-685
               

               
Cow position:
               
chr23:24685443-24685144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
136, 100
               

               
Conread position:
               
393-703
               

               
Cow position:
               
chr23:2501654-2501978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 267
               

               
Conread position:
               
393-709
               

               
Cow position:
               
chr23:26986069-26986402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
393-711
               

               
Cow position:
               
chr23:1883596-1883261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
106, 271
               

               
Conread position:
               
393-711
               

               
Cow position:
               
chr23:5732740-5732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr23:9726337-9726477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr23:20725489-20725623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr23:22529251-22529382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr23:25933350-25933222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
394-562
               

               
Cow position:
               
chr23:10676056-10675875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr23:1480844-1480652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 189
               

               
Conread position:
               
394-578
               

               
Cow position:
               
chr23:39109137-39108940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
394-583
               

               
Cow position:
               
chr23:17012540-17012736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr23:35656611-35656403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
394-694
               

               
Cow position:
               
chr23:38974037-38973730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
394-699
               

               
Cow position:
               
chr23:9805561-9805872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
394-703
               

               
Cow position:
               
chr23:3890370-3890691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 245
               

               
Conread position:
               
394-708
               

               
Cow position:
               
chr23:4498930-4499262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr23:24509886-24509566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr23:32479815-32480172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr23:38454961-38455318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr23:4726994-4726650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr23:10853249-10852912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr23:15743293-15742955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr23:26949393-26949062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr23:20248491-20248837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr23:4968329-4968665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr23:10416226-10416569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
395-528
               

               
Cow position:
               
chr23:26975266-26975400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
395-720
               

               
Cow position:
               
chr23:20388465-20388783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
396-552
               

               
Cow position:
               
chr23:29607274-29607110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
396-692
               

               
Cow position:
               
chr23:35149952-35149637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 249
               

               
Conread position:
               
396-711
               

               
Cow position:
               
chr23:1759447-1759135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 192
               

               
Conread position:
               
397-662
               

               
Cow position:
               
chr23:38264330-38264618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
397-680
               

               
Cow position:
               
chr23:10497895-10497606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 205
               

               
Conread position:
               
397-703
               

               
Cow position:
               
chr23:5795675-5795353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
77, 309
               

               
Conread position:
               
397-703
               

               
Cow position:
               
chr23:9874859-9874543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr23:17597620-17597440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
398-573
               

               
Cow position:
               
chr23:40542072-40542252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
398-576
               

               
Cow position:
               
chr23:38992898-38993081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
398-592
               

               
Cow position:
               
chr23:12405623-12405831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
398-636
               

               
Cow position:
               
chr23:35930146-35929898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
398-638
               

               
Cow position:
               
chr23:18823182-18822932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
398-680
               

               
Cow position:
               
chr23:769343-769652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
398-685
               

               
Cow position:
               
chr23:3522941-3522645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
398-706
               

               
Cow position:
               
chr23:283204-283516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
398-711
               

               
Cow position:
               
chr23:26051218-26050903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
165, 63
               

               
Conread position:
               
398-711
               

               
Cow position:
               
chr23:37066054-37065708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr23:1636466-1636141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 137
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr23:13555235-13555569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr23:22804920-22804587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr23:39753299-39752981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr23:7845486-7845152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr23:20171760-20171437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr23:24704481-24704140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr23:26779476-26779810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr23:14838563-14838882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
399-661
               

               
Cow position:
               
chr23:18238327-18238610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr23:343981-344311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
61, 186
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr23:16880973-16881299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr23:40781510-40781189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
400-578
               

               
Cow position:
               
chr23:21423962-21423773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
400-590
               

               
Cow position:
               
chr23:16447498-16447695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
400-714
               

               
Cow position:
               
chr23:20996633-20996330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
400-715
               

               
Cow position:
               
chr23:1884977-1885309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 227
               

               
Conread position:
               
400-715
               

               
Cow position:
               
chr23:41472821-41472477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 259
               

               
Conread position:
               
403-563
               

               
Cow position:
               
chr23:2395405-2395575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr23:5927429-5927604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
403-663
               

               
Cow position:
               
chr23:17486634-17486912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
403-685
               

               
Cow position:
               
chr23:17484664-17484954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
403-710
               

               
Cow position:
               
chr23:34611303-34611602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
403-711
               

               
Cow position:
               
chr23:6224161-6223857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
403-715
               

               
Cow position:
               
chr23:18415864-18416185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chr23:10844751-10844581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
404-691
               

               
Cow position:
               
chr23:33599115-33599409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
404-720
               

               
Cow position:
               
chr23:31970358-31970676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
405-612
               

               
Cow position:
               
chr23:3234587-3234813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
405-699
               

               
Cow position:
               
chr23:349530-349848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
405-709
               

               
Cow position:
               
chr23:2286015-2285717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
405-711
               

               
Cow position:
               
chr23:20194739-20195050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
406-555
               

               
Cow position:
               
chr23:2288942-2288791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr23:24779350-24779552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
406-681
               

               
Cow position:
               
chr23:15280305-15280602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
406-711
               

               
Cow position:
               
chr23:5603107-5603408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr23:39083643-39083316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
407-711
               

               
Cow position:
               
chr23:26632989-26632670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
408-667
               

               
Cow position:
               
chr23:2359064-2358802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 29
               

               
Conread position:
               
408-715
               

               
Cow position:
               
chr23:4972953-4972646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
409-715
               

               
Cow position:
               
chr23:7361282-7360980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
410-706
               

               
Cow position:
               
chr23:4327504-4327818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 185
               

               
Conread position:
               
410-711
               

               
Cow position:
               
chr23:21452546-21452864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 295
               

               
Conread position:
               
411-711
               

               
Cow position:
               
chr23:468279-468593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
411-715
               

               
Cow position:
               
chr23:1188735-1189037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
411-719
               

               
Cow position:
               
chr23:15607750-15608071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
415-520
               

               
Cow position:
               
chr23:33244369-33244263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
417-710
               

               
Cow position:
               
chr23:16631451-16631136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 280
               

               
Conread position:
               
420-694
               

               
Cow position:
               
chr23:21446289-21446003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
92, 140
               

               
Conread position:
               
423-715
               

               
Cow position:
               
chr23:15709927-15710215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
144, 75
               

               
Conread position:
               
424-664
               

               
Cow position:
               
chr23:14651536-14651791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
424-698
               

               
Cow position:
               
chr23:1701346-1701051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 287
               

               
Conread position:
               
426-715
               

               
Cow position:
               
chr23:20056712-20057003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
431-711
               

               
Cow position:
               
chr23:5723702-5723410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
431-711
               

               
Cow position:
               
chr23:23409887-23409606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
432-715
               

               
Cow position:
               
chr23:33601376-33601665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
433-715
               

               
Cow position:
               
chr23:39775888-39775593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 229
               

               
Conread position:
               
441-719
               

               
Cow position:
               
chr23:40844797-40844512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
443-715
               

               
Cow position:
               
chr23:5540298-5540025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
446-715
               

               
Cow position:
               
chr23:33621997-33622289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 231
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr23:38208864-38208601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
459-715
               

               
Cow position:
               
chr23:18296941-18296670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
460-662
               

               
Cow position:
               
chr23:21309280-21309497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
460-675
               

               
Cow position:
               
chr23:29069308-29069540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-689
               

               
Cow position:
               
chr23:39780887-39780645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 160
               

               
Conread position:
               
460-694
               

               
Cow position:
               
chr23:1254820-1254573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
460-710
               

               
Cow position:
               
chr23:1397904-1398170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 201
               

               
Conread position:
               
460-710
               

               
Cow position:
               
chr23:1742488-1742224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
460-711
               

               
Cow position:
               
chr23:20434931-20435185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
460-714
               

               
Cow position:
               
chr23:21502498-21502773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 219
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr23:13511858-13511599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr23:14739583-14739312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 171
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr23:29034447-29034180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 242
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr23:40648598-40648861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 187
               

               
Conread position:
               
460-719
               

               
Cow position:
               
chr23:38502975-38503252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
460-720
               

               
Cow position:
               
chr23:4104528-4104261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
460-720
               

               
Cow position:
               
chr23:11380119-11380395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
460-720
               

               
Cow position:
               
chr23:18697895-18698170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
462-714
               

               
Cow position:
               
chr23:30951086-30950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 205
               

               
Conread position:
               
462-715
               

               
Cow position:
               
chr23:10553878-10554145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 176
               

               
Conread position:
               
464-711
               

               
Cow position:
               
chr23:24867438-24867173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 242
               

               
Conread position:
               
464-715
               

               
Cow position:
               
chr23:6592579-6592840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
465-633
               

               
Cow position:
               
chr23:3244341-3244522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
465-658
               

               
Cow position:
               
chr23:38845726-38845525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
465-694
               

               
Cow position:
               
chr23:13946165-13945919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr23:1767958-1767693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr23:1923710-1923973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr23:6994855-6995115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr23:18402163-18402426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
465-720
               

               
Cow position:
               
chr23:7574497-7574774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 204
               

               
Conread position:
               
465-720
               

               
Cow position:
               
chr23:7596226-7596475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
467-715
               

               
Cow position:
               
chr23:25358838-25358599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
468-715
               

               
Cow position:
               
chr23:4966943-4966683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
470-715
               

               
Cow position:
               
chr23:25378759-25378517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
472-695
               

               
Cow position:
               
chr23:1876832-1876591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
472-714
               

               
Cow position:
               
chr23:19774889-19774638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
476-702
               

               
Cow position:
               
chr23:28944952-28945188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr23:16699925-16700179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
476-719
               

               
Cow position:
               
chr23:29458982-29459231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
477-715
               

               
Cow position:
               
chr23:4528763-4529020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
477-720
               

               
Cow position:
               
chr23:13599456-13599203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
478-715
               

               
Cow position:
               
chr23:21336369-21336628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
478-720
               

               
Cow position:
               
chr23:14164280-14164545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 233
               

               
Conread position:
               
485-683
               

               
Cow position:
               
chr23:4795277-4795067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
485-715
               

               
Cow position:
               
chr23:36309528-36309284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 221
               

               
Conread position:
               
486-710
               

               
Cow position:
               
chr23:27544934-27544697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 213
               

               
Conread position:
               
495-711
               

               
Cow position:
               
chr23:1647714-1647486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 209
               

               
Conread position:
               
496-699
               

               
Cow position:
               
chr23:4562982-4562764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
496-711
               

               
Cow position:
               
chr23:3262401-3262629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
496-720
               

               
Cow position:
               
chr23:34348412-34348184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
497-700
               

               
Cow position:
               
chr23:17796231-17796431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
512-715
               

               
Cow position:
               
chr23:10014603-10014402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 89
               

               
Conread position:
               
525-680
               

               
Cow position:
               
chr23:18036597-18036760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr23:4329614-4329818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr23:19371014-19371207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr23:27997189-27996999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
526-715
               

               
Cow position:
               
chr23:28053331-28053139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
528-694
               

               
Cow position:
               
chr23:1929089-1928915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
528-697
               

               
Cow position:
               
chr23:7402759-7402583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
528-715
               

               
Cow position:
               
chr23:1921169-1921364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
529-715
               

               
Cow position:
               
chr23:4608324-4608517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 185
               

               
Conread position:
               
532-715
               

               
Cow position:
               
chr23:2055758-2055569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
550-694
               

               
Cow position:
               
chr23:1670938-1670785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
550-715
               

               
Cow position:
               
chr23:19978922-19979080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
555-699
               

               
Cow position:
               
chr23:4445687-4445841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
555-720
               

               
Cow position:
               
chr23:26942473-26942296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
570-711
               

               
Cow position:
               
chr23:35254233-35254371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
571-714
               

               
Cow position:
               
chr23:809175-809029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr23:23114043-23113892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
571-720
               

               
Cow position:
               
chr23:39028791-39028636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
578-715
               

               
Cow position:
               
chr23:1068312-1068450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
580-704
               

               
Cow position:
               
chr23:39248762-39248890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr23:11081072-11080943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
580-720
               

               
Cow position:
               
chr23:3955413-3955268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
583-712
               

               
Cow position:
               
chr23:33232916-33233043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
595-697
               

               
Cow position:
               
chr23:27529123-27529224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.