• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0027f08.3
        

               
Conread position:
               
43-694
               

               
Cow position:
               
chr3:76168772-76169427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
529, 523
               

               
Conread position:
               
309-711
               

               
Cow position:
               
chr3:9662910-9663330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
317-715
               

               
Cow position:
               
chr3:4319969-4319552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
320-715
               

               
Cow position:
               
chr3:80565203-80564801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
328-619
               

               
Cow position:
               
chr3:15160753-15160459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
330-469
               

               
Cow position:
               
chr3:75976120-75975986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
330-525
               

               
Cow position:
               
chr3:79316931-79316728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
330-715
               

               
Cow position:
               
chr3:52651839-52652237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
337-572
               

               
Cow position:
               
chr3:51150365-51150115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
338-575
               

               
Cow position:
               
chr3:27286748-27286502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
338-576
               

               
Cow position:
               
chr3:44534300-44534548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
9, 228
               

               
Conread position:
               
340-578
               

               
Cow position:
               
chr3:56943704-56943945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
341-672
               

               
Cow position:
               
chr3:58527602-58527277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
341-694
               

               
Cow position:
               
chr3:51033602-51033228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
341-714
               

               
Cow position:
               
chr3:31297927-31298317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
342-568
               

               
Cow position:
               
chr3:65022527-65022285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
343-558
               

               
Cow position:
               
chr3:8147304-8147521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
343-590
               

               
Cow position:
               
chr3:42967165-42967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
343-597
               

               
Cow position:
               
chr3:11229144-11229403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
343-689
               

               
Cow position:
               
chr3:43585531-43585187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
344-577
               

               
Cow position:
               
chr3:83934952-83934705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
345-641
               

               
Cow position:
               
chr3:49363327-49363025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
347-517
               

               
Cow position:
               
chr3:42933705-42933529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
347-574
               

               
Cow position:
               
chr3:32377040-32376799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
349-679
               

               
Cow position:
               
chr3:56678139-56678481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
349-711
               

               
Cow position:
               
chr3:3556773-3556391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
349-714
               

               
Cow position:
               
chr3:67929043-67929425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
349-720
               

               
Cow position:
               
chr3:59649472-59649087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
122, 7
               

               
Conread position:
               
350-566
               

               
Cow position:
               
chr3:44594841-44594615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
107, 47
               

               
Conread position:
               
350-694
               

               
Cow position:
               
chr3:37041633-37041272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
350-710
               

               
Cow position:
               
chr3:19586080-19585704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
350-715
               

               
Cow position:
               
chr3:53910322-53909951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
350-715
               

               
Cow position:
               
chr3:83846118-83845742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
350-717
               

               
Cow position:
               
chr3:18067345-18066971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
351-617
               

               
Cow position:
               
chr3:33002603-33002331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
351-711
               

               
Cow position:
               
chr3:59035257-59034875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
352-506
               

               
Cow position:
               
chr3:17401593-17401438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr3:74500474-74500299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
352-580
               

               
Cow position:
               
chr3:59317919-59317681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
353-567
               

               
Cow position:
               
chr3:3584557-3584349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
353-689
               

               
Cow position:
               
chr3:17058333-17058677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
353-711
               

               
Cow position:
               
chr3:77582323-77581950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
354-715
               

               
Cow position:
               
chr3:13301632-13302011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
355-710
               

               
Cow position:
               
chr3:60933637-60933259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 319
               

               
Conread position:
               
356-528
               

               
Cow position:
               
chr3:11608034-11607859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 133
               

               
Conread position:
               
357-552
               

               
Cow position:
               
chr3:60371191-60370996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
357-574
               

               
Cow position:
               
chr3:41863835-41863610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
357-619
               

               
Cow position:
               
chr3:29334195-29334475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
357-693
               

               
Cow position:
               
chr3:73237391-73237053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
357-711
               

               
Cow position:
               
chr3:72626-72256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
171, 36
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr3:39967285-39967451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
358-619
               

               
Cow position:
               
chr3:54068003-54067730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
358-703
               

               
Cow position:
               
chr3:45667133-45667503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
358-710
               

               
Cow position:
               
chr3:32787673-32787303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 141
               

               
Conread position:
               
359-715
               

               
Cow position:
               
chr3:12705337-12705708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
360-710
               

               
Cow position:
               
chr3:34095759-34096113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
360-715
               

               
Cow position:
               
chr3:27696761-27697141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
361-529
               

               
Cow position:
               
chr3:44218972-44218802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
361-563
               

               
Cow position:
               
chr3:52845764-52845552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
362-694
               

               
Cow position:
               
chr3:79271499-79271865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 314
               

               
Conread position:
               
362-711
               

               
Cow position:
               
chr3:38828955-38828609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
362-714
               

               
Cow position:
               
chr3:35153814-35153460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
362-715
               

               
Cow position:
               
chr3:75158554-75158197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
363-527
               

               
Cow position:
               
chr3:58497867-58497696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
363-567
               

               
Cow position:
               
chr3:54350230-54350449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
363-710
               

               
Cow position:
               
chr3:79824709-79825073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
363-711
               

               
Cow position:
               
chr3:53738976-53739344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 347
               

               
Conread position:
               
364-567
               

               
Cow position:
               
chr3:78258545-78258763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
364-685
               

               
Cow position:
               
chr3:59605047-59604716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
110, 287
               

               
Conread position:
               
365-517
               

               
Cow position:
               
chr3:19611150-19611303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
103, 6
               

               
Conread position:
               
366-528
               

               
Cow position:
               
chr3:66354887-66354716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:22094407-22094596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
366-714
               

               
Cow position:
               
chr3:53428715-53429057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 215
               

               
Conread position:
               
366-719
               

               
Cow position:
               
chr3:55970717-55970339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
367-573
               

               
Cow position:
               
chr3:72027841-72027625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 205
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr3:58452248-58452028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
368-572
               

               
Cow position:
               
chr3:76168428-76168645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
368-574
               

               
Cow position:
               
chr3:82195684-82195471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
368-590
               

               
Cow position:
               
chr3:16107174-16107392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 57
               

               
Conread position:
               
368-710
               

               
Cow position:
               
chr3:54049825-54050176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 224
               

               
Conread position:
               
368-712
               

               
Cow position:
               
chr3:15153890-15153533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 269
               

               
Conread position:
               
368-719
               

               
Cow position:
               
chr3:53588202-53588553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
368-720
               

               
Cow position:
               
chr3:65237221-65236856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
369-574
               

               
Cow position:
               
chr3:20065943-20066169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
369-715
               

               
Cow position:
               
chr3:65058898-65058540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
370-517
               

               
Cow position:
               
chr3:41826137-41826284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-570
               

               
Cow position:
               
chr3:79398347-79398131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
370-574
               

               
Cow position:
               
chr3:75966581-75966796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
370-578
               

               
Cow position:
               
chr3:76056092-76056304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
370-710
               

               
Cow position:
               
chr3:67698480-67698122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 326
               

               
Conread position:
               
371-573
               

               
Cow position:
               
chr3:59702372-59702157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
371-699
               

               
Cow position:
               
chr3:6299653-6299321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
371-703
               

               
Cow position:
               
chr3:2648308-2648664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
371-720
               

               
Cow position:
               
chr3:53318607-53318234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
371-720
               

               
Cow position:
               
chr3:68587220-68586854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 126
               

               
Conread position:
               
374-572
               

               
Cow position:
               
chr3:67407172-67407379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
374-711
               

               
Cow position:
               
chr3:59333954-59333613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
374-719
               

               
Cow position:
               
chr3:43233696-43233341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
374-720
               

               
Cow position:
               
chr3:23920230-23920597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 253
               

               
Conread position:
               
375-528
               

               
Cow position:
               
chr3:8522959-8523116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
375-617
               

               
Cow position:
               
chr3:9025895-9026153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
375-657
               

               
Cow position:
               
chr3:3316612-3316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 239
               

               
Conread position:
               
375-663
               

               
Cow position:
               
chr3:21866847-21867149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
375-685
               

               
Cow position:
               
chr3:19711142-19711465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
375-706
               

               
Cow position:
               
chr3:55177559-55177906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr3:53875569-53875921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
375-715
               

               
Cow position:
               
chr3:71238341-71237994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
375-719
               

               
Cow position:
               
chr3:64717193-64716859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
376-508
               

               
Cow position:
               
chr3:22821048-22820916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr3:25735711-25735868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr3:69849105-69849255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
376-531
               

               
Cow position:
               
chr3:34392034-34392187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
376-548
               

               
Cow position:
               
chr3:68624414-68624228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
376-561
               

               
Cow position:
               
chr3:2016624-2016433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
376-568
               

               
Cow position:
               
chr3:44720690-44720492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
376-579
               

               
Cow position:
               
chr3:70402832-70402622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
376-590
               

               
Cow position:
               
chr3:13240880-13241111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 198
               

               
Conread position:
               
376-681
               

               
Cow position:
               
chr3:42796326-42796638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
376-694
               

               
Cow position:
               
chr3:15228649-15228961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
376-697
               

               
Cow position:
               
chr3:42434133-42434478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
376-709
               

               
Cow position:
               
chr3:71247206-71246868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
376-710
               

               
Cow position:
               
chr3:74601310-74600954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 336
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:1830380-1830731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:27274720-27274369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
98, 305
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:50768873-50768520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 324
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:55189558-55189918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:59630313-59630664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:68648368-68648002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr3:81087443-81087784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 231
               

               
Conread position:
               
376-718
               

               
Cow position:
               
chr3:23734895-23735264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 297
               

               
Conread position:
               
377-566
               

               
Cow position:
               
chr3:31115084-31115277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
377-568
               

               
Cow position:
               
chr3:6579670-6579479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
377-576
               

               
Cow position:
               
chr3:9718057-9718268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
377-610
               

               
Cow position:
               
chr3:48483368-48483123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
377-661
               

               
Cow position:
               
chr3:4268382-4268692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
377-708
               

               
Cow position:
               
chr3:20802450-20802779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
193, 16
               

               
Conread position:
               
377-715
               

               
Cow position:
               
chr3:73395306-73394958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
378-520
               

               
Cow position:
               
chr3:2636744-2636889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
378-574
               

               
Cow position:
               
chr3:986203-985999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
378-576
               

               
Cow position:
               
chr3:2638123-2637909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
378-662
               

               
Cow position:
               
chr3:26792645-26792364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
197, 43
               

               
Conread position:
               
379-517
               

               
Cow position:
               
chr3:70632337-70632193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
379-525
               

               
Cow position:
               
chr3:37641515-37641367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr3:2637137-2636987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr3:18764294-18764139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr3:53604555-53604708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr3:55105956-55106111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
379-574
               

               
Cow position:
               
chr3:1011682-1011471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
379-578
               

               
Cow position:
               
chr3:78071602-78071811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
379-688
               

               
Cow position:
               
chr3:78093206-78093520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
379-695
               

               
Cow position:
               
chr3:15443536-15443873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
379-710
               

               
Cow position:
               
chr3:189063-188703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:6182042-6182362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:18393208-18393550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:51233914-51234259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 97
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:55124094-55124440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:68616148-68616487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:76138651-76138317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:77427560-77427236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr3:80072334-80071964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 345
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr3:19793086-19792726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
379-719
               

               
Cow position:
               
chr3:38035398-38035758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
379-720
               

               
Cow position:
               
chr3:23105176-23105535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
379-720
               

               
Cow position:
               
chr3:26982240-26981897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
379-720
               

               
Cow position:
               
chr3:31309165-31309522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
379-720
               

               
Cow position:
               
chr3:51578135-51578487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
380-527
               

               
Cow position:
               
chr3:39996706-39996849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
380-529
               

               
Cow position:
               
chr3:49787745-49787595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
380-659
               

               
Cow position:
               
chr3:9117228-9116920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
380-681
               

               
Cow position:
               
chr3:48459140-48459465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr3:14553060-14552716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr3:18459348-18459684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr3:28908027-28908364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
380-715
               

               
Cow position:
               
chr3:74234373-74234034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
380-719
               

               
Cow position:
               
chr3:49679323-49678959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
380-719
               

               
Cow position:
               
chr3:71478780-71478425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
380-720
               

               
Cow position:
               
chr3:68156919-68156572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
381-517
               

               
Cow position:
               
chr3:8540687-8540556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
381-517
               

               
Cow position:
               
chr3:26977725-26977588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
381-520
               

               
Cow position:
               
chr3:74939771-74939632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr3:62789762-62789917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr3:74050516-74050664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
381-561
               

               
Cow position:
               
chr3:46259900-46259708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
381-566
               

               
Cow position:
               
chr3:15859194-15859386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr3:4120184-4120381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr3:84154593-84154400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 114
               

               
Conread position:
               
381-576
               

               
Cow position:
               
chr3:12090867-12090658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
381-576
               

               
Cow position:
               
chr3:43388938-43389145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
381-584
               

               
Cow position:
               
chr3:79893307-79893521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
381-604
               

               
Cow position:
               
chr3:4549205-4548979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
381-621
               

               
Cow position:
               
chr3:35075059-35074816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
381-634
               

               
Cow position:
               
chr3:59299761-59299493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
381-657
               

               
Cow position:
               
chr3:22165228-22165523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
381-660
               

               
Cow position:
               
chr3:57704520-57704214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
381-679
               

               
Cow position:
               
chr3:31225610-31225312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
381-682
               

               
Cow position:
               
chr3:81337408-81337133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
240, 73
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr3:30266506-30266829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
381-689
               

               
Cow position:
               
chr3:14465528-14465848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
381-692
               

               
Cow position:
               
chr3:60264532-60264856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
381-697
               

               
Cow position:
               
chr3:47417382-47417711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
381-708
               

               
Cow position:
               
chr3:21112456-21112800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr3:24468197-24468536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
381-711
               

               
Cow position:
               
chr3:68145665-68146001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
381-712
               

               
Cow position:
               
chr3:57577882-57577536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
381-714
               

               
Cow position:
               
chr3:15159219-15158880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
381-714
               

               
Cow position:
               
chr3:18687091-18686746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr3:7330951-7331275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr3:14601523-14601875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr3:30462991-30463328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr3:53271020-53270666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
381-716
               

               
Cow position:
               
chr3:81039558-81039910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr3:17134519-17134170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
148, 223
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr3:17456080-17456431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr3:53147596-53147948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr3:70676418-70676058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr3:26066175-26065836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr3:71496941-71497310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 310
               

               
Conread position:
               
382-528
               

               
Cow position:
               
chr3:77098638-77098785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
382-566
               

               
Cow position:
               
chr3:19044583-19044773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
382-606
               

               
Cow position:
               
chr3:23131982-23132219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
382-620
               

               
Cow position:
               
chr3:56948908-56949152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
382-676
               

               
Cow position:
               
chr3:15950731-15951036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
382-687
               

               
Cow position:
               
chr3:72342434-72342109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
382-694
               

               
Cow position:
               
chr3:3889389-3889709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
382-711
               

               
Cow position:
               
chr3:53790355-53790695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
382-714
               

               
Cow position:
               
chr3:17694813-17695164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 191
               

               
Conread position:
               
382-714
               

               
Cow position:
               
chr3:53222199-53221853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 270
               

               
Conread position:
               
382-715
               

               
Cow position:
               
chr3:54506896-54506547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 302
               

               
Conread position:
               
382-715
               

               
Cow position:
               
chr3:70761934-70762285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
382-720
               

               
Cow position:
               
chr3:2675217-2674860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
382-720
               

               
Cow position:
               
chr3:75853149-75853500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
383-489
               

               
Cow position:
               
chr3:42348267-42348161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
383-517
               

               
Cow position:
               
chr3:45168746-45168618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
383-528
               

               
Cow position:
               
chr3:30682845-30682988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
383-528
               

               
Cow position:
               
chr3:43895877-43896022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-548
               

               
Cow position:
               
chr3:56754350-56754522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
383-559
               

               
Cow position:
               
chr3:3453767-3453587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
383-561
               

               
Cow position:
               
chr3:61680502-61680315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
383-574
               

               
Cow position:
               
chr3:58101861-58101664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
383-574
               

               
Cow position:
               
chr3:83672041-83671840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
383-576
               

               
Cow position:
               
chr3:8181763-8181968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
383-582
               

               
Cow position:
               
chr3:61023834-61024047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
383-590
               

               
Cow position:
               
chr3:46305646-46305431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
383-698
               

               
Cow position:
               
chr3:59040754-59040420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr3:57764400-57764065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr3:60597725-60597380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr3:68303505-68303170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 196
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr3:75687251-75687601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
383-718
               

               
Cow position:
               
chr3:59719035-59718677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
383-719
               

               
Cow position:
               
chr3:2518355-2518699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 205
               

               
Conread position:
               
383-719
               

               
Cow position:
               
chr3:33252706-33253047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 205
               

               
Conread position:
               
383-719
               

               
Cow position:
               
chr3:54771166-54770843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
384-694
               

               
Cow position:
               
chr3:60389941-60389625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
384-703
               

               
Cow position:
               
chr3:23408180-23408502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
384-715
               

               
Cow position:
               
chr3:78092327-78092668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
384-719
               

               
Cow position:
               
chr3:29891219-29891579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
385-694
               

               
Cow position:
               
chr3:5365849-5365535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
385-715
               

               
Cow position:
               
chr3:2506291-2506639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
386-511
               

               
Cow position:
               
chr3:49369792-49369666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
386-572
               

               
Cow position:
               
chr3:25702148-25702355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
386-574
               

               
Cow position:
               
chr3:29234495-29234697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
386-586
               

               
Cow position:
               
chr3:74644743-74644526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
386-633
               

               
Cow position:
               
chr3:48477862-48478114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
386-688
               

               
Cow position:
               
chr3:74846542-74846847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
386-714
               

               
Cow position:
               
chr3:31419878-31419539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 220
               

               
Conread position:
               
386-715
               

               
Cow position:
               
chr3:8393522-8393188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
386-715
               

               
Cow position:
               
chr3:56476857-56476518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr3:621623-621415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
387-699
               

               
Cow position:
               
chr3:20130119-20129796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 201
               

               
Conread position:
               
387-720
               

               
Cow position:
               
chr3:2538419-2538085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 96
               

               
Conread position:
               
388-515
               

               
Cow position:
               
chr3:15780923-15781055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
388-625
               

               
Cow position:
               
chr3:79272396-79272647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
388-658
               

               
Cow position:
               
chr3:83988713-83988425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
388-710
               

               
Cow position:
               
chr3:61224568-61224899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
388-715
               

               
Cow position:
               
chr3:24872873-24872553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
389-528
               

               
Cow position:
               
chr3:29944040-29943894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
389-528
               

               
Cow position:
               
chr3:64909916-64910058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
389-590
               

               
Cow position:
               
chr3:54905786-54905583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
389-638
               

               
Cow position:
               
chr3:11640913-11640641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
389-694
               

               
Cow position:
               
chr3:20996822-20997131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr3:32585333-32584991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr3:39969684-39970030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr3:50614803-50614475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr3:53384100-53384446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
78, 248
               

               
Conread position:
               
389-717
               

               
Cow position:
               
chr3:54373677-54374024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
389-720
               

               
Cow position:
               
chr3:22675928-22676257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
389-720
               

               
Cow position:
               
chr3:46005835-46006194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
390-574
               

               
Cow position:
               
chr3:7381653-7381844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
390-631
               

               
Cow position:
               
chr3:27976345-27976606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
390-647
               

               
Cow position:
               
chr3:75777890-75778157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
390-680
               

               
Cow position:
               
chr3:14194011-14194307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
390-684
               

               
Cow position:
               
chr3:3656694-3656378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
390-694
               

               
Cow position:
               
chr3:13890662-13890333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
390-699
               

               
Cow position:
               
chr3:11253986-11254308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 203
               

               
Conread position:
               
390-699
               

               
Cow position:
               
chr3:48566510-48566808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
390-703
               

               
Cow position:
               
chr3:29946565-29946244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr3:3913262-3913608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr3:48851788-48852121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 214
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr3:61539977-61539643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr3:5044631-5044968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr3:13899275-13899611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr3:67929990-67930344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 186
               

               
Conread position:
               
390-719
               

               
Cow position:
               
chr3:23877178-23876828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
391-491
               

               
Cow position:
               
chr3:52359314-52359211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-517
               

               
Cow position:
               
chr3:14000380-14000502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
391-520
               

               
Cow position:
               
chr3:55972905-55973032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
391-527
               

               
Cow position:
               
chr3:20888483-20888624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr3:14211808-14211945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr3:67942355-67942498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-556
               

               
Cow position:
               
chr3:63069183-63069363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
391-561
               

               
Cow position:
               
chr3:37851674-37851494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
391-573
               

               
Cow position:
               
chr3:58010656-58010842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
391-573
               

               
Cow position:
               
chr3:59885709-59885526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:6728143-6728345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:7581540-7581732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:44960123-44959927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:47198948-47199142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:65308275-65308469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:78115412-78115594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr3:84137636-84137830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr3:41366522-41366727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr3:45744088-45743888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
391-578
               

               
Cow position:
               
chr3:74127322-74127522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 168
               

               
Conread position:
               
391-590
               

               
Cow position:
               
chr3:35624365-35624580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
391-593
               

               
Cow position:
               
chr3:18831596-18831383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
391-598
               

               
Cow position:
               
chr3:83770912-83770688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-615
               

               
Cow position:
               
chr3:30357687-30357464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 74
               

               
Conread position:
               
391-654
               

               
Cow position:
               
chr3:80733672-80733945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
391-661
               

               
Cow position:
               
chr3:26505416-26505698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
391-667
               

               
Cow position:
               
chr3:55094053-55094350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
391-672
               

               
Cow position:
               
chr3:26992751-26992446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-672
               

               
Cow position:
               
chr3:80740731-80740443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
139, 34
               

               
Conread position:
               
391-673
               

               
Cow position:
               
chr3:6403599-6403300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
391-674
               

               
Cow position:
               
chr3:48468354-48468060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
391-678
               

               
Cow position:
               
chr3:58134506-58134814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
391-681
               

               
Cow position:
               
chr3:19199165-19198852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
391-687
               

               
Cow position:
               
chr3:21081202-21081509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr3:30026552-30026239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 203
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr3:15953904-15954227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 318
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr3:79098278-79097960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 283
               

               
Conread position:
               
391-697
               

               
Cow position:
               
chr3:29596573-29596248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr3:11199798-11200130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
391-699
               

               
Cow position:
               
chr3:39661276-39661599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
391-702
               

               
Cow position:
               
chr3:58960415-58960738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
391-703
               

               
Cow position:
               
chr3:18059882-18059550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 258
               

               
Conread position:
               
391-709
               

               
Cow position:
               
chr3:25690978-25690633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 262
               

               
Conread position:
               
391-709
               

               
Cow position:
               
chr3:79902675-79902347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:1788117-1787790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 197
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:14801922-14801591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:16547848-16547522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:26488899-26489242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:31055835-31056155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr3:53592508-53592854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-711
               

               
Cow position:
               
chr3:2850755-2851053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
391-714
               

               
Cow position:
               
chr3:15671975-15672305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:210500-210154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 286
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:2392791-2393127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:26739246-26739582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:48253057-48252721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:49460748-49461095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:49482536-49482873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:52608359-52608025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 269
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:55318720-55319065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:55712609-55712267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:59391947-59392268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr3:74087999-74088332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
391-719
               

               
Cow position:
               
chr3:18725485-18725801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
391-719
               

               
Cow position:
               
chr3:20841701-20842022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
391-719
               

               
Cow position:
               
chr3:30180261-30179914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr3:29359986-29360306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr3:54551532-54551897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr3:69144874-69144537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 196
               

               
Conread position:
               
392-574
               

               
Cow position:
               
chr3:5703354-5703163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
392-597
               

               
Cow position:
               
chr3:28902585-28902802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
392-631
               

               
Cow position:
               
chr3:76270065-76269817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 209
               

               
Conread position:
               
392-638
               

               
Cow position:
               
chr3:23203052-23203322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
392-640
               

               
Cow position:
               
chr3:31349931-31350194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
392-641
               

               
Cow position:
               
chr3:23804678-23804427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 5
               

               
Conread position:
               
392-689
               

               
Cow position:
               
chr3:67519999-67520309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
392-711
               

               
Cow position:
               
chr3:16333981-16333642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
76, 297
               

               
Conread position:
               
392-714
               

               
Cow position:
               
chr3:48363246-48362924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
127, 261
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr3:36418310-36418628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
228, 172
               

               
Conread position:
               
392-720
               

               
Cow position:
               
chr3:25477968-25477649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
141, 6
               

               
Conread position:
               
393-566
               

               
Cow position:
               
chr3:80958333-80958518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
393-609
               

               
Cow position:
               
chr3:71474231-71474457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
393-695
               

               
Cow position:
               
chr3:74584366-74584074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
184, 64
               

               
Conread position:
               
393-700
               

               
Cow position:
               
chr3:34871744-34871421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 281
               

               
Conread position:
               
393-714
               

               
Cow position:
               
chr3:59610543-59610882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
66, 255
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr3:29887264-29887584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr3:68707846-68708166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr3:68880955-68881274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
393-719
               

               
Cow position:
               
chr3:68632581-68632899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
393-720
               

               
Cow position:
               
chr3:22232492-22232819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
393-720
               

               
Cow position:
               
chr3:69750559-69750868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 56
               

               
Conread position:
               
394-511
               

               
Cow position:
               
chr3:15952468-15952357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
394-515
               

               
Cow position:
               
chr3:27212493-27212372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr3:14517906-14518041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
394-533
               

               
Cow position:
               
chr3:22078253-22078108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
394-562
               

               
Cow position:
               
chr3:23037333-23037512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
394-562
               

               
Cow position:
               
chr3:76300949-76300767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
394-563
               

               
Cow position:
               
chr3:80923240-80923075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
394-566
               

               
Cow position:
               
chr3:55730291-55730476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
394-566
               

               
Cow position:
               
chr3:73924865-73925040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
394-568
               

               
Cow position:
               
chr3:81616275-81616460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 179
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr3:4271540-4271357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr3:54557841-54557659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr3:59681732-59681919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr3:84807151-84807343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr3:18699933-18700128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr3:27246792-27246976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
394-578
               

               
Cow position:
               
chr3:28896846-28897040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr3:3698819-3698624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr3:46792558-46792350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr3:52457084-52456883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
394-596
               

               
Cow position:
               
chr3:59947843-59947627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
394-609
               

               
Cow position:
               
chr3:83889424-83889194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
394-613
               

               
Cow position:
               
chr3:40212860-40213090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 209
               

               
Conread position:
               
394-618
               

               
Cow position:
               
chr3:47316203-47316440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
394-618
               

               
Cow position:
               
chr3:84174479-84174239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
394-640
               

               
Cow position:
               
chr3:39873533-39873786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
394-640
               

               
Cow position:
               
chr3:60186328-60186064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 184
               

               
Conread position:
               
394-642
               

               
Cow position:
               
chr3:39247857-39248112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
394-669
               

               
Cow position:
               
chr3:58317768-58318071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 240
               

               
Conread position:
               
394-681
               

               
Cow position:
               
chr3:3649064-3649347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
394-689
               

               
Cow position:
               
chr3:64527021-64526711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
394-694
               

               
Cow position:
               
chr3:1517338-1517656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 252
               

               
Conread position:
               
394-697
               

               
Cow position:
               
chr3:35055801-35056125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
394-700
               

               
Cow position:
               
chr3:3036766-3037074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
394-701
               

               
Cow position:
               
chr3:11276425-11276721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
394-702
               

               
Cow position:
               
chr3:62046846-62046513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 287
               

               
Conread position:
               
394-703
               

               
Cow position:
               
chr3:70333794-70334115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 226
               

               
Conread position:
               
394-708
               

               
Cow position:
               
chr3:75050448-75050775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
394-708
               

               
Cow position:
               
chr3:83215444-83215104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 324
               

               
Conread position:
               
394-710
               

               
Cow position:
               
chr3:17957636-17957305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
394-710
               

               
Cow position:
               
chr3:53094749-53095093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
394-710
               

               
Cow position:
               
chr3:54903742-54903415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
394-710
               

               
Cow position:
               
chr3:55116802-55117125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 208
               

               
Conread position:
               
394-711
               

               
Cow position:
               
chr3:42671708-42671381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
394-711
               

               
Cow position:
               
chr3:57274233-57273908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr3:72777408-72777084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:2025378-2025022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
63, 276
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:8061295-8060965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:9641730-9641403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
179, 113
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:13329618-13329940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
199, 70
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:15051777-15052114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 99
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:17936672-17936997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:26904274-26903953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:36375363-36375706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 277
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:44932687-44932350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 312
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:45211479-45211135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 286
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:54435143-54434813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 307
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:55819924-55819585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:67744467-67744785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr3:75570271-75570610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr3:49118855-49119193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr3:57754300-57754646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
65, 261
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr3:72474097-72473745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr3:83491255-83490917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr3:29813401-29813077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr3:71231573-71231229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 213
               

               
Conread position:
               
395-711
               

               
Cow position:
               
chr3:48241780-48241458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
395-715
               

               
Cow position:
               
chr3:53836536-53836847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 163
               

               
Conread position:
               
396-571
               

               
Cow position:
               
chr3:28883989-28884173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
396-574
               

               
Cow position:
               
chr3:24304452-24304640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
396-689
               

               
Cow position:
               
chr3:61116699-61116995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
396-707
               

               
Cow position:
               
chr3:21014783-21015114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
396-710
               

               
Cow position:
               
chr3:45279642-45279307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 278
               

               
Conread position:
               
397-586
               

               
Cow position:
               
chr3:20021440-20021238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr3:15973742-15973531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
397-596
               

               
Cow position:
               
chr3:46559544-46559756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
397-648
               

               
Cow position:
               
chr3:64196997-64196727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
397-657
               

               
Cow position:
               
chr3:59945299-59945020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 253
               

               
Conread position:
               
397-681
               

               
Cow position:
               
chr3:18143943-18144251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
397-693
               

               
Cow position:
               
chr3:46541679-46541969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 40
               

               
Conread position:
               
397-703
               

               
Cow position:
               
chr3:3032581-3032254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 226
               

               
Conread position:
               
397-703
               

               
Cow position:
               
chr3:79093889-79094198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
397-715
               

               
Cow position:
               
chr3:37186980-37186668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
397-715
               

               
Cow position:
               
chr3:48810466-48810799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 215
               

               
Conread position:
               
397-715
               

               
Cow position:
               
chr3:65413094-65413442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 320
               

               
Conread position:
               
397-715
               

               
Cow position:
               
chr3:76922501-76922825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
397-715
               

               
Cow position:
               
chr3:77188612-77188275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 230
               

               
Conread position:
               
398-517
               

               
Cow position:
               
chr3:31804599-31804710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
398-528
               

               
Cow position:
               
chr3:4518013-4518145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
398-531
               

               
Cow position:
               
chr3:22903587-22903718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
398-551
               

               
Cow position:
               
chr3:53249656-53249501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
398-567
               

               
Cow position:
               
chr3:28323381-28323210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
398-568
               

               
Cow position:
               
chr3:81400935-81401106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr3:23640510-23640330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
398-579
               

               
Cow position:
               
chr3:26783336-26783527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
398-628
               

               
Cow position:
               
chr3:14547170-14546924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
398-638
               

               
Cow position:
               
chr3:40100558-40100795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
398-638
               

               
Cow position:
               
chr3:81234559-81234310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
64, 206
               

               
Conread position:
               
398-676
               

               
Cow position:
               
chr3:45700973-45700682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 91
               

               
Conread position:
               
398-680
               

               
Cow position:
               
chr3:54739729-54740017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
398-683
               

               
Cow position:
               
chr3:76156157-76155856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
398-686
               

               
Cow position:
               
chr3:79884309-79884615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 301
               

               
Conread position:
               
398-693
               

               
Cow position:
               
chr3:18426529-18426840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 179
               

               
Conread position:
               
398-693
               

               
Cow position:
               
chr3:20993966-20993670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
398-695
               

               
Cow position:
               
chr3:48900159-48900481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
76, 272
               

               
Conread position:
               
398-699
               

               
Cow position:
               
chr3:59474291-59473974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 269
               

               
Conread position:
               
398-703
               

               
Cow position:
               
chr3:75480169-75479852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
398-705
               

               
Cow position:
               
chr3:22221497-22221167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
398-706
               

               
Cow position:
               
chr3:3883649-3883972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
398-710
               

               
Cow position:
               
chr3:79221024-79220693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
398-711
               

               
Cow position:
               
chr3:5374480-5374176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:13577048-13577348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:23471292-23471626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 70
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:26970982-26970665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:53150504-53150167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:54100542-54100885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:70896210-70895888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:73764044-73764358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:76713141-76713488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 186
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:77365121-77365461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr3:78077361-78077031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 275
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr3:17331890-17331560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr3:58764915-58765242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr3:74533505-74533186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 86
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr3:6873100-6873411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
399-557
               

               
Cow position:
               
chr3:3401711-3401549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
399-572
               

               
Cow position:
               
chr3:63860440-63860624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
399-574
               

               
Cow position:
               
chr3:59272001-59271818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 161
               

               
Conread position:
               
399-630
               

               
Cow position:
               
chr3:10668709-10668958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
399-661
               

               
Cow position:
               
chr3:73837548-73837826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
399-712
               

               
Cow position:
               
chr3:63180034-63179701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 222
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr3:2630930-2630632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr3:7678835-7678505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr3:24353010-24352698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr3:49328104-49327779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr3:64280768-64281094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 301
               

               
Conread position:
               
399-719
               

               
Cow position:
               
chr3:3985486-3985161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
400-563
               

               
Cow position:
               
chr3:12899777-12899944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
400-566
               

               
Cow position:
               
chr3:80910766-80910588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
400-574
               

               
Cow position:
               
chr3:70756470-70756657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
400-674
               

               
Cow position:
               
chr3:73299234-73298964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
400-688
               

               
Cow position:
               
chr3:17235035-17235345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 223
               

               
Conread position:
               
400-702
               

               
Cow position:
               
chr3:55434500-55434178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
400-714
               

               
Cow position:
               
chr3:64172591-64172284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
400-715
               

               
Cow position:
               
chr3:45882068-45881747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 217
               

               
Conread position:
               
403-567
               

               
Cow position:
               
chr3:83199679-83199503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr3:62312964-62312781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr3:62370223-62370040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
403-681
               

               
Cow position:
               
chr3:34271065-34270786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
79, 91
               

               
Conread position:
               
403-686
               

               
Cow position:
               
chr3:7662023-7661718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
403-689
               

               
Cow position:
               
chr3:76024669-76024382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
403-705
               

               
Cow position:
               
chr3:71238642-71238318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
403-710
               

               
Cow position:
               
chr3:18855244-18854935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
403-711
               

               
Cow position:
               
chr3:65969340-65969000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
403-719
               

               
Cow position:
               
chr3:12978449-12978780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 316
               

               
Conread position:
               
403-720
               

               
Cow position:
               
chr3:17221967-17222311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 269
               

               
Conread position:
               
404-604
               

               
Cow position:
               
chr3:23753649-23753442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
404-630
               

               
Cow position:
               
chr3:82366294-82366055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 200
               

               
Conread position:
               
404-710
               

               
Cow position:
               
chr3:79591734-79592042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
405-621
               

               
Cow position:
               
chr3:51609020-51609249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 208
               

               
Conread position:
               
405-694
               

               
Cow position:
               
chr3:72255254-72255532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
405-702
               

               
Cow position:
               
chr3:79196927-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 249
               

               
Conread position:
               
405-710
               

               
Cow position:
               
chr3:76267810-76268139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
405-715
               

               
Cow position:
               
chr3:59000599-59000910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
405-720
               

               
Cow position:
               
chr3:59597337-59597016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
406-551
               

               
Cow position:
               
chr3:2903022-2903165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
406-574
               

               
Cow position:
               
chr3:59828225-59828408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr3:74787588-74787395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
406-633
               

               
Cow position:
               
chr3:40145630-40145385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
406-655
               

               
Cow position:
               
chr3:75238623-75238354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 220
               

               
Conread position:
               
406-694
               

               
Cow position:
               
chr3:82055965-82056251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
406-712
               

               
Cow position:
               
chr3:19793427-19793752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 238
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr3:58540354-58540691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr3:66900564-66900904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr3:74079475-74079801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 301
               

               
Conread position:
               
406-718
               

               
Cow position:
               
chr3:69416615-69416949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
406-719
               

               
Cow position:
               
chr3:2036467-2036132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 217
               

               
Conread position:
               
406-720
               

               
Cow position:
               
chr3:53046495-53046826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 174
               

               
Conread position:
               
407-689
               

               
Cow position:
               
chr3:13380116-13380424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 260
               

               
Conread position:
               
407-715
               

               
Cow position:
               
chr3:11712103-11711795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
407-719
               

               
Cow position:
               
chr3:7566259-7566586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
408-691
               

               
Cow position:
               
chr3:70334531-70334834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 218
               

               
Conread position:
               
408-719
               

               
Cow position:
               
chr3:56612523-56612193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
408-719
               

               
Cow position:
               
chr3:79270809-79271125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
409-519
               

               
Cow position:
               
chr3:37848696-37848802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
409-719
               

               
Cow position:
               
chr3:11987488-11987161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
56, 212
               

               
Conread position:
               
410-619
               

               
Cow position:
               
chr3:2484161-2483935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
410-710
               

               
Cow position:
               
chr3:30055289-30055606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 185
               

               
Conread position:
               
410-715
               

               
Cow position:
               
chr3:4050340-4050030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
410-715
               

               
Cow position:
               
chr3:68627528-68627843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 260
               

               
Conread position:
               
412-640
               

               
Cow position:
               
chr3:84250392-84250633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
418-720
               

               
Cow position:
               
chr3:72391238-72390915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
420-709
               

               
Cow position:
               
chr3:54960316-54960031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
420-715
               

               
Cow position:
               
chr3:55010022-55010328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
421-715
               

               
Cow position:
               
chr3:74134855-74134543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 257
               

               
Conread position:
               
423-715
               

               
Cow position:
               
chr3:44102113-44101807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
424-694
               

               
Cow position:
               
chr3:73820217-73820512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
424-716
               

               
Cow position:
               
chr3:38783753-38783449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 185
               

               
Conread position:
               
424-717
               

               
Cow position:
               
chr3:15388367-15388051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
428-719
               

               
Cow position:
               
chr3:20677707-20678001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
431-714
               

               
Cow position:
               
chr3:14599067-14598789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
431-715
               

               
Cow position:
               
chr3:77271140-77271435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 172
               

               
Conread position:
               
431-720
               

               
Cow position:
               
chr3:15751576-15751891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
432-689
               

               
Cow position:
               
chr3:6690140-6689864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
435-711
               

               
Cow position:
               
chr3:73709181-73708890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
441-703
               

               
Cow position:
               
chr3:28898091-28898373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 185
               

               
Conread position:
               
443-712
               

               
Cow position:
               
chr3:61144216-61143941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
447-720
               

               
Cow position:
               
chr3:82461298-82461010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
450-715
               

               
Cow position:
               
chr3:17895967-17895684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
452-678
               

               
Cow position:
               
chr3:35621412-35621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
453-715
               

               
Cow position:
               
chr3:59883957-59884235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
457-684
               

               
Cow position:
               
chr3:22510132-22509894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr3:5366877-5366624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 166
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr3:14263501-14263230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr3:52863074-52863347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
457-719
               

               
Cow position:
               
chr3:43571857-43571574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
460-683
               

               
Cow position:
               
chr3:10104144-10103917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
460-689
               

               
Cow position:
               
chr3:72503790-72504037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-690
               

               
Cow position:
               
chr3:84175718-84175964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
460-692
               

               
Cow position:
               
chr3:59621542-59621785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
460-698
               

               
Cow position:
               
chr3:43727177-43726931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
460-709
               

               
Cow position:
               
chr3:8394050-8393780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
460-710
               

               
Cow position:
               
chr3:8733251-8733513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
460-710
               

               
Cow position:
               
chr3:31206982-31206715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 186
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr3:26874697-26874428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr3:53113281-53113011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 247
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr3:70402002-70401740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr3:70899996-70899733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
460-719
               

               
Cow position:
               
chr3:26921006-26920742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
460-720
               

               
Cow position:
               
chr3:49790706-49790978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
461-660
               

               
Cow position:
               
chr3:55984203-55983986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
461-699
               

               
Cow position:
               
chr3:5100667-5100913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
461-714
               

               
Cow position:
               
chr3:32150469-32150217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
461-715
               

               
Cow position:
               
chr3:12711810-12712081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
461-715
               

               
Cow position:
               
chr3:48578909-48578674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 74
               

               
Conread position:
               
462-702
               

               
Cow position:
               
chr3:63269325-63269074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
462-715
               

               
Cow position:
               
chr3:57624568-57624301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
464-715
               

               
Cow position:
               
chr3:49231101-49230854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
464-719
               

               
Cow position:
               
chr3:79292929-79292663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
464-720
               

               
Cow position:
               
chr3:56059913-56059639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 246
               

               
Conread position:
               
465-639
               

               
Cow position:
               
chr3:74900542-74900726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
465-677
               

               
Cow position:
               
chr3:8901730-8901517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
465-689
               

               
Cow position:
               
chr3:32457294-32457063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
465-694
               

               
Cow position:
               
chr3:80053443-80053681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
465-694
               

               
Cow position:
               
chr3:81470995-81471236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
465-702
               

               
Cow position:
               
chr3:24935465-24935221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
465-708
               

               
Cow position:
               
chr3:67543767-67544024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr3:48296799-48296547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 140
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr3:67704647-67704380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 242
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr3:78894240-78894489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
465-719
               

               
Cow position:
               
chr3:61279009-61278742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
465-720
               

               
Cow position:
               
chr3:14626049-14626325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
465-720
               

               
Cow position:
               
chr3:59691989-59691731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
466-715
               

               
Cow position:
               
chr3:75045776-75046040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
467-670
               

               
Cow position:
               
chr3:33693918-33693699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
468-715
               

               
Cow position:
               
chr3:78945741-78945995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
469-720
               

               
Cow position:
               
chr3:31850280-31850537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
470-715
               

               
Cow position:
               
chr3:2216464-2216201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
472-669
               

               
Cow position:
               
chr3:37599334-37599544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 164
               

               
Conread position:
               
472-684
               

               
Cow position:
               
chr3:36671901-36672122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
476-703
               

               
Cow position:
               
chr3:55271955-55272197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 231
               

               
Conread position:
               
476-710
               

               
Cow position:
               
chr3:42423238-42423491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
476-711
               

               
Cow position:
               
chr3:26218963-26219208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
476-711
               

               
Cow position:
               
chr3:57760588-57760340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr3:2680603-2680354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr3:30222281-30222023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr3:59208884-59208652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr3:73443006-73443249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr3:80581745-80581501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
476-720
               

               
Cow position:
               
chr3:26960498-26960760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
477-692
               

               
Cow position:
               
chr3:55085081-55085317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
477-703
               

               
Cow position:
               
chr3:45648219-45647982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
477-709
               

               
Cow position:
               
chr3:32183942-32184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
477-714
               

               
Cow position:
               
chr3:53240345-53240105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
477-715
               

               
Cow position:
               
chr3:66883855-66884103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
478-682
               

               
Cow position:
               
chr3:83822499-83822713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
478-710
               

               
Cow position:
               
chr3:66292088-66292334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
478-715
               

               
Cow position:
               
chr3:38691318-38691571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
478-715
               

               
Cow position:
               
chr3:49383037-49382786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
478-715
               

               
Cow position:
               
chr3:49650476-49650223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
479-715
               

               
Cow position:
               
chr3:17934851-17935096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
479-715
               

               
Cow position:
               
chr3:46901284-46901034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
480-715
               

               
Cow position:
               
chr3:34669647-34669890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
480-719
               

               
Cow position:
               
chr3:59101913-59101662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
483-715
               

               
Cow position:
               
chr3:74502242-74502484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
485-720
               

               
Cow position:
               
chr3:5097288-5097034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
486-715
               

               
Cow position:
               
chr3:4032043-4031808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
486-715
               

               
Cow position:
               
chr3:61840355-61840115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
486-715
               

               
Cow position:
               
chr3:65800653-65800433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
486-719
               

               
Cow position:
               
chr3:72676171-72675926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
487-693
               

               
Cow position:
               
chr3:80468599-80468816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
487-716
               

               
Cow position:
               
chr3:58968824-58969064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
487-720
               

               
Cow position:
               
chr3:56298-56542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
490-715
               

               
Cow position:
               
chr3:76387532-76387761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
493-703
               

               
Cow position:
               
chr3:3638251-3638036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
498-711
               

               
Cow position:
               
chr3:26553647-26553874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
498-715
               

               
Cow position:
               
chr3:76015360-76015128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
499-703
               

               
Cow position:
               
chr3:18056496-18056293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
514-711
               

               
Cow position:
               
chr3:41328484-41328291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
525-703
               

               
Cow position:
               
chr3:81507077-81507262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
525-711
               

               
Cow position:
               
chr3:66609810-66610001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:10896856-10896670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:15752607-15752793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:22820605-22820406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:71430170-71430370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:72019150-72018953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:78896681-78896487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr3:81359073-81359275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
525-719
               

               
Cow position:
               
chr3:19708074-19708271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
525-720
               

               
Cow position:
               
chr3:20437622-20437817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
525-720
               

               
Cow position:
               
chr3:74878555-74878759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
527-688
               

               
Cow position:
               
chr3:46350704-46350534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
528-710
               

               
Cow position:
               
chr3:55947616-55947422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
528-715
               

               
Cow position:
               
chr3:29807494-29807303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
528-715
               

               
Cow position:
               
chr3:33698762-33698563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
529-703
               

               
Cow position:
               
chr3:34937874-34937693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
529-715
               

               
Cow position:
               
chr3:73759487-73759678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
529-720
               

               
Cow position:
               
chr3:49140019-49140209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
530-715
               

               
Cow position:
               
chr3:15992747-15992552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
534-718
               

               
Cow position:
               
chr3:22089252-22089444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
535-694
               

               
Cow position:
               
chr3:27544318-27544474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
535-719
               

               
Cow position:
               
chr3:55106415-55106605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
536-694
               

               
Cow position:
               
chr3:80953671-80953504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
539-690
               

               
Cow position:
               
chr3:60892645-60892485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
539-694
               

               
Cow position:
               
chr3:74500263-74500096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
539-710
               

               
Cow position:
               
chr3:8717262-8717092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
539-719
               

               
Cow position:
               
chr3:39328420-39328227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
540-715
               

               
Cow position:
               
chr3:39171467-39171645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
540-720
               

               
Cow position:
               
chr3:66375339-66375149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
542-720
               

               
Cow position:
               
chr3:35005793-35005612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
547-717
               

               
Cow position:
               
chr3:49218302-49218478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
549-718
               

               
Cow position:
               
chr3:69849497-69849671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
550-715
               

               
Cow position:
               
chr3:68582995-68583165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
550-715
               

               
Cow position:
               
chr3:83921199-83921040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
550-719
               

               
Cow position:
               
chr3:8147658-8147835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
550-719
               

               
Cow position:
               
chr3:42178166-42177990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr3:59515111-59514939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
553-689
               

               
Cow position:
               
chr3:75152032-75152173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
555-715
               

               
Cow position:
               
chr3:84000617-84000450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
560-703
               

               
Cow position:
               
chr3:27108910-27109051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
563-714
               

               
Cow position:
               
chr3:67161935-67161779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
564-720
               

               
Cow position:
               
chr3:25691742-25691584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
567-720
               

               
Cow position:
               
chr3:55062883-55063035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
571-694
               

               
Cow position:
               
chr3:44534775-44534901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
571-694
               

               
Cow position:
               
chr3:61024317-61024445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr3:53192442-53192584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr3:63860905-63861059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
571-719
               

               
Cow position:
               
chr3:17952642-17952489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
571-719
               

               
Cow position:
               
chr3:49731655-49731809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
572-702
               

               
Cow position:
               
chr3:15232012-15231879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
574-719
               

               
Cow position:
               
chr3:5899806-5899655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
574-719
               

               
Cow position:
               
chr3:30358652-30358802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
575-719
               

               
Cow position:
               
chr3:57553874-57554017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
576-711
               

               
Cow position:
               
chr3:27212343-27212203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
576-711
               

               
Cow position:
               
chr3:44622907-44623043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
576-711
               

               
Cow position:
               
chr3:82657108-82657246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
576-715
               

               
Cow position:
               
chr3:25060059-25059915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
576-719
               

               
Cow position:
               
chr3:522679-522542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
578-715
               

               
Cow position:
               
chr3:8604041-8604176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
580-688
               

               
Cow position:
               
chr3:30701278-30701170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
580-692
               

               
Cow position:
               
chr3:3062536-3062423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
580-708
               

               
Cow position:
               
chr3:7940584-7940711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr3:15661725-15661865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr3:31046983-31047113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr3:41367012-41367146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
582-709
               

               
Cow position:
               
chr3:15859700-15859823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
583-715
               

               
Cow position:
               
chr3:4087194-4087330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
583-715
               

               
Cow position:
               
chr3:73590029-73590161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
589-715
               

               
Cow position:
               
chr3:80081860-80081985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
592-715
               

               
Cow position:
               
chr3:78739818-78739694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
598-715
               

               
Cow position:
               
chr3:61361359-61361241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
624-715
               

               
Cow position:
               
chr3:56704616-56704706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.