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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0027f08.3
        

               
Conread position:
               
295-618
               

               
Cow position:
               
chr4:67393393-67393045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
307-527
               

               
Cow position:
               
chr4:36058322-36058097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
315-578
               

               
Cow position:
               
chr4:61998933-61999204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
328-574
               

               
Cow position:
               
chr4:16070428-16070671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
331-715
               

               
Cow position:
               
chr4:54191360-54190942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 263
               

               
Conread position:
               
333-719
               

               
Cow position:
               
chr4:31505767-31506182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
340-510
               

               
Cow position:
               
chr4:39656774-39656600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
340-510
               

               
Cow position:
               
chr4:61193096-61193268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
341-527
               

               
Cow position:
               
chr4:34722616-34722423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
341-711
               

               
Cow position:
               
chr4:36290861-36290486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 19
               

               
Conread position:
               
342-699
               

               
Cow position:
               
chr4:11611106-11610749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
343-528
               

               
Cow position:
               
chr4:43910006-43909816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
343-715
               

               
Cow position:
               
chr4:15905351-15904952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
344-574
               

               
Cow position:
               
chr4:31178062-31177826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
344-715
               

               
Cow position:
               
chr4:2099873-2099487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
344-715
               

               
Cow position:
               
chr4:4320752-4321148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
346-578
               

               
Cow position:
               
chr4:37985971-37985728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
346-715
               

               
Cow position:
               
chr4:18974662-18974285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
348-707
               

               
Cow position:
               
chr4:12031084-12030708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
349-473
               

               
Cow position:
               
chr4:501431-501558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr4:12048115-12047854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
349-640
               

               
Cow position:
               
chr4:45706273-45705973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
349-679
               

               
Cow position:
               
chr4:56746229-56745898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
349-718
               

               
Cow position:
               
chr4:7964412-7964805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
349-720
               

               
Cow position:
               
chr4:37935069-37935435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
350-579
               

               
Cow position:
               
chr4:8388843-8389077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
350-611
               

               
Cow position:
               
chr4:44854053-44854327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr4:5728067-5727790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
350-699
               

               
Cow position:
               
chr4:21065263-21064906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
351-694
               

               
Cow position:
               
chr4:22546613-22546964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 5
               

               
Conread position:
               
352-720
               

               
Cow position:
               
chr4:15635215-15635599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr4:15236854-15236618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
353-691
               

               
Cow position:
               
chr4:5576984-5577326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
353-715
               

               
Cow position:
               
chr4:51769343-51768966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
354-715
               

               
Cow position:
               
chr4:18095434-18095820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
354-720
               

               
Cow position:
               
chr4:15439816-15439426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
355-573
               

               
Cow position:
               
chr4:48227463-48227685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
356-517
               

               
Cow position:
               
chr4:45741855-45742023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
356-673
               

               
Cow position:
               
chr4:33181774-33181430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
356-720
               

               
Cow position:
               
chr4:23526926-23526541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
357-581
               

               
Cow position:
               
chr4:23984890-23985131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
357-699
               

               
Cow position:
               
chr4:68076310-68076660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
358-699
               

               
Cow position:
               
chr4:22101037-22101390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
360-689
               

               
Cow position:
               
chr4:54767166-54767509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
213, 37
               

               
Conread position:
               
361-663
               

               
Cow position:
               
chr4:45800103-45799779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
362-574
               

               
Cow position:
               
chr4:63078447-63078224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
362-699
               

               
Cow position:
               
chr4:24371628-24371983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
363-711
               

               
Cow position:
               
chr4:16762498-16762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
364-580
               

               
Cow position:
               
chr4:42373936-42374160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
364-685
               

               
Cow position:
               
chr4:46494523-46494179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
364-715
               

               
Cow position:
               
chr4:42423590-42423944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
364-719
               

               
Cow position:
               
chr4:33100585-33100967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
365-574
               

               
Cow position:
               
chr4:45852730-45852941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
365-697
               

               
Cow position:
               
chr4:48770791-48770442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr4:47230780-47231000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
367-616
               

               
Cow position:
               
chr4:38349979-38350245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
367-692
               

               
Cow position:
               
chr4:50194909-50194574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
367-715
               

               
Cow position:
               
chr4:48104350-48104719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr4:12748203-12748358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
368-572
               

               
Cow position:
               
chr4:69290525-69290739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
368-578
               

               
Cow position:
               
chr4:8083591-8083803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 89
               

               
Conread position:
               
368-584
               

               
Cow position:
               
chr4:36876640-36876866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
368-714
               

               
Cow position:
               
chr4:22907711-22907375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
162, 22
               

               
Conread position:
               
368-714
               

               
Cow position:
               
chr4:34165772-34166123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
368-715
               

               
Cow position:
               
chr4:3283239-3283593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
369-528
               

               
Cow position:
               
chr4:19200319-19200167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
369-660
               

               
Cow position:
               
chr4:44772823-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
369-710
               

               
Cow position:
               
chr4:13326738-13327095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr4:45484017-45483799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
370-699
               

               
Cow position:
               
chr4:60897083-60897406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
370-715
               

               
Cow position:
               
chr4:21259419-21259070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
370-719
               

               
Cow position:
               
chr4:59871692-59871335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
371-606
               

               
Cow position:
               
chr4:13131701-13131441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
371-694
               

               
Cow position:
               
chr4:59873638-59873305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
371-711
               

               
Cow position:
               
chr4:35982213-35981851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
25, 341
               

               
Conread position:
               
372-578
               

               
Cow position:
               
chr4:47283800-47284015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
372-699
               

               
Cow position:
               
chr4:4318939-4319277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
372-714
               

               
Cow position:
               
chr4:19119232-19118861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 345
               

               
Conread position:
               
372-720
               

               
Cow position:
               
chr4:85907-85539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 102
               

               
Conread position:
               
372-720
               

               
Cow position:
               
chr4:23450876-23451249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
373-528
               

               
Cow position:
               
chr4:42608950-42608793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
373-720
               

               
Cow position:
               
chr4:10968187-10968538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
374-715
               

               
Cow position:
               
chr4:22073108-22073462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
374-719
               

               
Cow position:
               
chr4:12127428-12127792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
374-720
               

               
Cow position:
               
chr4:46061160-46060794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
375-547
               

               
Cow position:
               
chr4:21128333-21128164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
375-566
               

               
Cow position:
               
chr4:34919065-34919261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
375-576
               

               
Cow position:
               
chr4:617167-617378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
375-601
               

               
Cow position:
               
chr4:3299590-3299825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
375-612
               

               
Cow position:
               
chr4:40995944-40995688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 188
               

               
Conread position:
               
375-636
               

               
Cow position:
               
chr4:59001928-59002202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
375-694
               

               
Cow position:
               
chr4:25227143-25226823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
375-694
               

               
Cow position:
               
chr4:66256888-66256560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
376-515
               

               
Cow position:
               
chr4:12604854-12604715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
376-515
               

               
Cow position:
               
chr4:47035513-47035657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
376-527
               

               
Cow position:
               
chr4:63198157-63198316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr4:2770279-2770128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr4:27657177-27657031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
376-528
               

               
Cow position:
               
chr4:34722673-34722833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
376-563
               

               
Cow position:
               
chr4:33838594-33838787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
376-566
               

               
Cow position:
               
chr4:22482528-22482332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
376-568
               

               
Cow position:
               
chr4:5250397-5250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
376-574
               

               
Cow position:
               
chr4:12245417-12245214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
376-574
               

               
Cow position:
               
chr4:32562041-32561831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr4:348224-348424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
376-581
               

               
Cow position:
               
chr4:40393020-40392818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
376-666
               

               
Cow position:
               
chr4:63951956-63952262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
376-685
               

               
Cow position:
               
chr4:13026502-13026184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
376-694
               

               
Cow position:
               
chr4:2681537-2681229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
376-699
               

               
Cow position:
               
chr4:10915623-10915967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
376-714
               

               
Cow position:
               
chr4:34369257-34369598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr4:9681499-9681154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
182, 21
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr4:45685664-45685322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr4:52748252-52748604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
376-715
               

               
Cow position:
               
chr4:52823193-52823551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 256
               

               
Conread position:
               
376-719
               

               
Cow position:
               
chr4:14414146-14414493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr4:19238426-19238086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr4:62472281-62471921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
377-702
               

               
Cow position:
               
chr4:12004426-12004090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
377-720
               

               
Cow position:
               
chr4:25197282-25197647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 273
               

               
Conread position:
               
379-528
               

               
Cow position:
               
chr4:33389068-33388912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
379-555
               

               
Cow position:
               
chr4:54315017-54315202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
379-568
               

               
Cow position:
               
chr4:13372209-13372006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
379-574
               

               
Cow position:
               
chr4:19496706-19496496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
379-616
               

               
Cow position:
               
chr4:36517295-36517526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
213, 14
               

               
Conread position:
               
379-659
               

               
Cow position:
               
chr4:38822113-38822409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr4:1985855-1985497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr4:22138010-22138378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
379-715
               

               
Cow position:
               
chr4:46393650-46393289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 316
               

               
Conread position:
               
379-720
               

               
Cow position:
               
chr4:508703-509053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
380-520
               

               
Cow position:
               
chr4:63261679-63261533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
380-524
               

               
Cow position:
               
chr4:53134804-53134662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
380-576
               

               
Cow position:
               
chr4:26959761-26959969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
380-576
               

               
Cow position:
               
chr4:51986369-51986579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
380-708
               

               
Cow position:
               
chr4:68430356-68430005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
380-711
               

               
Cow position:
               
chr4:24810247-24810583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
380-719
               

               
Cow position:
               
chr4:17186144-17186503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
381-512
               

               
Cow position:
               
chr4:48042276-48042406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
381-517
               

               
Cow position:
               
chr4:30944158-30944020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr4:7816504-7816347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr4:17076071-17076225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr4:53050198-53050047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr4:63293660-63293514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
381-556
               

               
Cow position:
               
chr4:46234958-46235140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
381-567
               

               
Cow position:
               
chr4:21161309-21161114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
381-568
               

               
Cow position:
               
chr4:11186170-11185971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr4:57566491-57566679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
381-574
               

               
Cow position:
               
chr4:60761849-60761647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
381-594
               

               
Cow position:
               
chr4:43579211-43579432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
381-640
               

               
Cow position:
               
chr4:65463311-65463569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
381-644
               

               
Cow position:
               
chr4:5790849-5790579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr4:16513326-16513636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
381-689
               

               
Cow position:
               
chr4:45837425-45837748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 275
               

               
Conread position:
               
381-694
               

               
Cow position:
               
chr4:4084905-4085248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
381-702
               

               
Cow position:
               
chr4:58248609-58248269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr4:202939-203283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr4:43148621-43148266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 303
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr4:59277267-59277617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 281
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:17774161-17774500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:20026901-20027247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:34310261-34310597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:37915133-37915484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 326
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:41867651-41867298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
381-715
               

               
Cow position:
               
chr4:43515927-43515580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 222
               

               
Conread position:
               
381-717
               

               
Cow position:
               
chr4:9444479-9444834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
381-719
               

               
Cow position:
               
chr4:46258698-46258335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr4:11897097-11897448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 156
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr4:15871538-15871873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr4:33096765-33097129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
381-720
               

               
Cow position:
               
chr4:61388863-61389223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
382-576
               

               
Cow position:
               
chr4:14131626-14131437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
382-578
               

               
Cow position:
               
chr4:23059649-23059858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
382-662
               

               
Cow position:
               
chr4:19573491-19573193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
382-679
               

               
Cow position:
               
chr4:26332998-26333307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
382-679
               

               
Cow position:
               
chr4:26335165-26335474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
382-688
               

               
Cow position:
               
chr4:25356125-25356427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
382-694
               

               
Cow position:
               
chr4:47748616-47748290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
382-699
               

               
Cow position:
               
chr4:56498667-56499011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 303
               

               
Conread position:
               
382-704
               

               
Cow position:
               
chr4:7043615-7043959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
382-714
               

               
Cow position:
               
chr4:38944052-38944406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 330
               

               
Conread position:
               
382-714
               

               
Cow position:
               
chr4:49158586-49158930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 237
               

               
Conread position:
               
382-717
               

               
Cow position:
               
chr4:28839813-28839478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
382-719
               

               
Cow position:
               
chr4:66547560-66547919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 296
               

               
Conread position:
               
383-517
               

               
Cow position:
               
chr4:9571309-9571170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
383-550
               

               
Cow position:
               
chr4:30935158-30935334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
383-563
               

               
Cow position:
               
chr4:21112371-21112559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
383-591
               

               
Cow position:
               
chr4:6093862-6094085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
383-674
               

               
Cow position:
               
chr4:2774926-2774611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 232
               

               
Conread position:
               
383-683
               

               
Cow position:
               
chr4:38156891-38157206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 78
               

               
Conread position:
               
383-692
               

               
Cow position:
               
chr4:52780046-52779728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
383-700
               

               
Cow position:
               
chr4:20124765-20125116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
383-706
               

               
Cow position:
               
chr4:23444836-23445185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 142
               

               
Conread position:
               
383-706
               

               
Cow position:
               
chr4:54938081-54937751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
383-714
               

               
Cow position:
               
chr4:10999508-10999849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:656604-656962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:11187654-11187307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:22713295-22713637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:27530314-27529971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:45250174-45249830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr4:48409085-48409412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
193, 16
               

               
Conread position:
               
383-719
               

               
Cow position:
               
chr4:68569443-68569803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
384-526
               

               
Cow position:
               
chr4:60772372-60772229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
384-528
               

               
Cow position:
               
chr4:3853680-3853530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
384-528
               

               
Cow position:
               
chr4:50837904-50837756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
384-643
               

               
Cow position:
               
chr4:62568557-62568286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
384-693
               

               
Cow position:
               
chr4:34699841-34700163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
384-703
               

               
Cow position:
               
chr4:32259636-32259976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
384-720
               

               
Cow position:
               
chr4:45589394-45589749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
384-720
               

               
Cow position:
               
chr4:62317646-62317293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
385-715
               

               
Cow position:
               
chr4:21391619-21391959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
386-517
               

               
Cow position:
               
chr4:66168139-66168266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
386-669
               

               
Cow position:
               
chr4:56005955-56005663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 201
               

               
Conread position:
               
386-693
               

               
Cow position:
               
chr4:19578581-19578278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
386-710
               

               
Cow position:
               
chr4:34171376-34171711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
386-715
               

               
Cow position:
               
chr4:29805169-29805516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 235
               

               
Conread position:
               
386-720
               

               
Cow position:
               
chr4:22860528-22860863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 89
               

               
Conread position:
               
386-720
               

               
Cow position:
               
chr4:34022387-34022738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 321
               

               
Conread position:
               
388-703
               

               
Cow position:
               
chr4:13142387-13142675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
389-525
               

               
Cow position:
               
chr4:43436462-43436319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
389-583
               

               
Cow position:
               
chr4:50687670-50687868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
389-709
               

               
Cow position:
               
chr4:6413004-6413329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr4:53209398-53209091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
203, 71
               

               
Conread position:
               
389-719
               

               
Cow position:
               
chr4:30974530-30974190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
390-514
               

               
Cow position:
               
chr4:22701617-22701741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
390-528
               

               
Cow position:
               
chr4:53941598-53941742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
390-528
               

               
Cow position:
               
chr4:68590964-68590826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
390-567
               

               
Cow position:
               
chr4:51083145-51083329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
390-571
               

               
Cow position:
               
chr4:4647595-4647404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
390-574
               

               
Cow position:
               
chr4:29247005-29247199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
390-574
               

               
Cow position:
               
chr4:42347681-42347486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
390-692
               

               
Cow position:
               
chr4:31023645-31023325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr4:14542480-14542820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
390-714
               

               
Cow position:
               
chr4:37313362-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr4:20327528-20327856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr4:23846860-23847194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
390-720
               

               
Cow position:
               
chr4:13693479-13693825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
391-513
               

               
Cow position:
               
chr4:43709962-43710088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
391-515
               

               
Cow position:
               
chr4:45629850-45629979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr4:45212992-45213132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
391-563
               

               
Cow position:
               
chr4:25802888-25802703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-570
               

               
Cow position:
               
chr4:24356700-24356516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr4:17790102-17790290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr4:30769226-30769037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
391-574
               

               
Cow position:
               
chr4:53347787-53347968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 57
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr4:42277798-42277984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
391-576
               

               
Cow position:
               
chr4:58045438-58045635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-577
               

               
Cow position:
               
chr4:12867295-12867104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
391-581
               

               
Cow position:
               
chr4:60955515-60955322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
391-590
               

               
Cow position:
               
chr4:7698459-7698248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
391-606
               

               
Cow position:
               
chr4:46883473-46883706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
391-610
               

               
Cow position:
               
chr4:19199089-19199324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
78, 219
               

               
Conread position:
               
391-626
               

               
Cow position:
               
chr4:61608774-61609021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
391-647
               

               
Cow position:
               
chr4:66380142-66380422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
391-654
               

               
Cow position:
               
chr4:26644941-26644650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
391-657
               

               
Cow position:
               
chr4:19292908-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
391-659
               

               
Cow position:
               
chr4:60131423-60131131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
391-667
               

               
Cow position:
               
chr4:32693982-32693685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
391-670
               

               
Cow position:
               
chr4:16754966-16755244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
180, 77
               

               
Conread position:
               
391-683
               

               
Cow position:
               
chr4:7302-7605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 200
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr4:10981696-10981996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr4:52140632-52140324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr4:37343314-37342990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 294
               

               
Conread position:
               
391-694
               

               
Cow position:
               
chr4:56591236-56590915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
391-703
               

               
Cow position:
               
chr4:2885352-2885679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
139, 80
               

               
Conread position:
               
391-703
               

               
Cow position:
               
chr4:46528788-46529103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
391-704
               

               
Cow position:
               
chr4:49019504-49019823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 102
               

               
Conread position:
               
391-707
               

               
Cow position:
               
chr4:12474045-12473711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 300
               

               
Conread position:
               
391-709
               

               
Cow position:
               
chr4:20147379-20147046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 232
               

               
Conread position:
               
391-709
               

               
Cow position:
               
chr4:34077142-34076816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:11004540-11004864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:19265771-19265435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 296
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:27665211-27664868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:29107105-29106762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
82, 254
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:47041221-47041565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 259
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:55270572-55270898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr4:68943987-68944313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 195
               

               
Conread position:
               
391-711
               

               
Cow position:
               
chr4:13284578-13284242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 299
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr4:13668424-13668774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr4:34383149-34383493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr4:59055677-59056000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
391-719
               

               
Cow position:
               
chr4:18756631-18756283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr4:570982-570645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr4:9137480-9137125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 244
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr4:27632635-27632299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
391-720
               

               
Cow position:
               
chr4:57722256-57721907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
392-571
               

               
Cow position:
               
chr4:54500852-54501018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
392-669
               

               
Cow position:
               
chr4:63770028-63769746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
392-674
               

               
Cow position:
               
chr4:45725056-45724769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
392-687
               

               
Cow position:
               
chr4:6148736-6149030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
392-699
               

               
Cow position:
               
chr4:16814584-16814261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
392-710
               

               
Cow position:
               
chr4:45582928-45583264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
392-711
               

               
Cow position:
               
chr4:34631100-34630752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 319
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr4:961473-961810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr4:19745063-19744739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
392-715
               

               
Cow position:
               
chr4:51728267-51727930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
393-528
               

               
Cow position:
               
chr4:12908561-12908428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
393-557
               

               
Cow position:
               
chr4:23271476-23271301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
393-558
               

               
Cow position:
               
chr4:61214664-61214828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
393-579
               

               
Cow position:
               
chr4:3519611-3519417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
393-685
               

               
Cow position:
               
chr4:14940596-14940282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr4:28771878-28772213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
393-715
               

               
Cow position:
               
chr4:43894617-43894957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 245
               

               
Conread position:
               
393-720
               

               
Cow position:
               
chr4:56570983-56570655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
394-513
               

               
Cow position:
               
chr4:21925535-21925649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
394-517
               

               
Cow position:
               
chr4:29206716-29206598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
394-517
               

               
Cow position:
               
chr4:49338230-49338107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-517
               

               
Cow position:
               
chr4:66412374-66412252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
394-527
               

               
Cow position:
               
chr4:13297570-13297437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-528
               

               
Cow position:
               
chr4:59105494-59105628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-563
               

               
Cow position:
               
chr4:5790-5629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
394-566
               

               
Cow position:
               
chr4:8675558-8675381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr4:22849311-22849490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr4:56236363-56236550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
394-574
               

               
Cow position:
               
chr4:56410536-56410347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr4:46656325-46656130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr4:38949337-38949537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr4:39010244-39010050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr4:42080514-42080702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr4:13919170-13918963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr4:42231842-42232041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr4:58018533-58018326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
394-593
               

               
Cow position:
               
chr4:42044784-42044991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
394-621
               

               
Cow position:
               
chr4:47305272-47305034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
394-644
               

               
Cow position:
               
chr4:47038960-47038690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
394-656
               

               
Cow position:
               
chr4:63471899-63472162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
394-673
               

               
Cow position:
               
chr4:20142720-20143008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 262
               

               
Conread position:
               
394-689
               

               
Cow position:
               
chr4:16238978-16239271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
394-692
               

               
Cow position:
               
chr4:38946410-38946084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
394-693
               

               
Cow position:
               
chr4:45636363-45636039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
34, 293
               

               
Conread position:
               
394-694
               

               
Cow position:
               
chr4:19584905-19584591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
394-695
               

               
Cow position:
               
chr4:12591029-12591338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
394-695
               

               
Cow position:
               
chr4:32458665-32458990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 187
               

               
Conread position:
               
394-711
               

               
Cow position:
               
chr4:31348009-31348332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr4:2894229-2893879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr4:3440584-3440261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
394-714
               

               
Cow position:
               
chr4:26659491-26659159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 250
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:3388733-3388398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:19597141-19597462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
136, 68
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:22236294-22236627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:28836722-28836384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:29291697-29291373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:38935549-38935210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:44613196-44612856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:45662325-45662654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
394-715
               

               
Cow position:
               
chr4:47262728-47262386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
394-716
               

               
Cow position:
               
chr4:37732288-37732636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
394-717
               

               
Cow position:
               
chr4:9925448-9925774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
394-719
               

               
Cow position:
               
chr4:58834226-58834552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr4:42673367-42673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 305
               

               
Conread position:
               
394-720
               

               
Cow position:
               
chr4:56239673-56240001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
395-674
               

               
Cow position:
               
chr4:41900156-41899875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
396-715
               

               
Cow position:
               
chr4:23509780-23509446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
396-715
               

               
Cow position:
               
chr4:49424973-49424686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
225, 42
               

               
Conread position:
               
397-555
               

               
Cow position:
               
chr4:2628718-2628549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
397-568
               

               
Cow position:
               
chr4:55694358-55694186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 75
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr4:43542294-43542489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
178, 67
               

               
Conread position:
               
397-645
               

               
Cow position:
               
chr4:8182446-8182717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
397-674
               

               
Cow position:
               
chr4:25354716-25354428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 199
               

               
Conread position:
               
397-675
               

               
Cow position:
               
chr4:24092943-24093247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
397-708
               

               
Cow position:
               
chr4:19709131-19708801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 236
               

               
Conread position:
               
397-709
               

               
Cow position:
               
chr4:66118342-66118666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
397-718
               

               
Cow position:
               
chr4:46383177-46383515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 225
               

               
Conread position:
               
398-528
               

               
Cow position:
               
chr4:48693782-48693653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
398-528
               

               
Cow position:
               
chr4:50131709-50131571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
398-529
               

               
Cow position:
               
chr4:51617809-51617945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
398-537
               

               
Cow position:
               
chr4:28854089-28854231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
398-553
               

               
Cow position:
               
chr4:12052150-12052306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
398-573
               

               
Cow position:
               
chr4:20164510-20164690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
398-573
               

               
Cow position:
               
chr4:30691189-30691007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
398-575
               

               
Cow position:
               
chr4:32602013-32601838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
398-584
               

               
Cow position:
               
chr4:59015767-59015584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
398-591
               

               
Cow position:
               
chr4:45840579-45840381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 72
               

               
Conread position:
               
398-612
               

               
Cow position:
               
chr4:14020686-14020459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
398-632
               

               
Cow position:
               
chr4:35638719-35638963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
398-641
               

               
Cow position:
               
chr4:62370496-62370243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
398-654
               

               
Cow position:
               
chr4:3837455-3837186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
398-660
               

               
Cow position:
               
chr4:19102689-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
398-674
               

               
Cow position:
               
chr4:46136936-46136645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
398-693
               

               
Cow position:
               
chr4:13221993-13222307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 228
               

               
Conread position:
               
398-699
               

               
Cow position:
               
chr4:41370754-41371071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 218
               

               
Conread position:
               
398-703
               

               
Cow position:
               
chr4:49794837-49794536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
398-708
               

               
Cow position:
               
chr4:54871836-54872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
398-710
               

               
Cow position:
               
chr4:29384054-29384363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
398-714
               

               
Cow position:
               
chr4:3421811-3421482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 273
               

               
Conread position:
               
398-714
               

               
Cow position:
               
chr4:12676982-12676659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 97
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr4:19314174-19313862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
172, 28
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr4:27276358-27276692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr4:45076892-45077220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
131, 273
               

               
Conread position:
               
398-715
               

               
Cow position:
               
chr4:45234703-45235005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr4:46527191-46526847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
398-719
               

               
Cow position:
               
chr4:1015258-1014917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr4:19315820-19316152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr4:25370281-25369970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
398-720
               

               
Cow position:
               
chr4:34641536-34641879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
399-667
               

               
Cow position:
               
chr4:44183934-44184210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
399-714
               

               
Cow position:
               
chr4:19700293-19699961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 220
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr4:13590273-13589941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr4:16881187-16881509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr4:19407805-19408146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr4:40414441-40414774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 280
               

               
Conread position:
               
399-719
               

               
Cow position:
               
chr4:44496548-44496229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
400-672
               

               
Cow position:
               
chr4:54789828-54789535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
400-694
               

               
Cow position:
               
chr4:53208468-53208168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
400-700
               

               
Cow position:
               
chr4:55508076-55508371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
400-715
               

               
Cow position:
               
chr4:13344721-13344400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 219
               

               
Conread position:
               
400-719
               

               
Cow position:
               
chr4:49629671-49629333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
402-554
               

               
Cow position:
               
chr4:44681077-44681230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr4:27511730-27511546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
403-590
               

               
Cow position:
               
chr4:46560361-46560162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
403-694
               

               
Cow position:
               
chr4:14500065-14500379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
403-699
               

               
Cow position:
               
chr4:59372109-59372405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
403-714
               

               
Cow position:
               
chr4:4084275-4084593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
403-715
               

               
Cow position:
               
chr4:21531458-21531790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 256
               

               
Conread position:
               
403-719
               

               
Cow position:
               
chr4:5609909-5610221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
404-694
               

               
Cow position:
               
chr4:68764700-68764395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
404-719
               

               
Cow position:
               
chr4:59785501-59785167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 246
               

               
Conread position:
               
404-720
               

               
Cow position:
               
chr4:27344501-27344822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
405-567
               

               
Cow position:
               
chr4:30648027-30647862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
405-576
               

               
Cow position:
               
chr4:38358643-38358821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
405-697
               

               
Cow position:
               
chr4:31004232-31004536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
405-702
               

               
Cow position:
               
chr4:8770274-8769973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
405-715
               

               
Cow position:
               
chr4:23646690-23646989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
405-715
               

               
Cow position:
               
chr4:43740711-43740375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
405-719
               

               
Cow position:
               
chr4:10732401-10732072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
406-574
               

               
Cow position:
               
chr4:48138123-48137950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
406-711
               

               
Cow position:
               
chr4:54478735-54479046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 181
               

               
Conread position:
               
406-714
               

               
Cow position:
               
chr4:4827312-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr4:17124130-17124442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr4:26323923-26323590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
406-715
               

               
Cow position:
               
chr4:45775151-45775493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
407-677
               

               
Cow position:
               
chr4:61066931-61066665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
408-528
               

               
Cow position:
               
chr4:60072575-60072690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
408-714
               

               
Cow position:
               
chr4:34210214-34209884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
408-715
               

               
Cow position:
               
chr4:46070-45775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
408-715
               

               
Cow position:
               
chr4:54171802-54171476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
409-571
               

               
Cow position:
               
chr4:39092060-39091895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
409-592
               

               
Cow position:
               
chr4:53819508-53819700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 177
               

               
Conread position:
               
410-694
               

               
Cow position:
               
chr4:806235-805938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
410-705
               

               
Cow position:
               
chr4:53126283-53125981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
411-567
               

               
Cow position:
               
chr4:68807931-68808100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
411-699
               

               
Cow position:
               
chr4:57584065-57584375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
412-720
               

               
Cow position:
               
chr4:11021506-11021806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
413-710
               

               
Cow position:
               
chr4:29237868-29238180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 204
               

               
Conread position:
               
413-715
               

               
Cow position:
               
chr4:16594248-16593937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
413-715
               

               
Cow position:
               
chr4:36929468-36929171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
413-720
               

               
Cow position:
               
chr4:19097463-19097138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 149
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr4:12901384-12901667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 257
               

               
Conread position:
               
417-685
               

               
Cow position:
               
chr4:17052417-17052718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
417-710
               

               
Cow position:
               
chr4:63768-64081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 185
               

               
Conread position:
               
419-715
               

               
Cow position:
               
chr4:25888677-25888976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
420-590
               

               
Cow position:
               
chr4:44786204-44786024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
421-655
               

               
Cow position:
               
chr4:61188702-61188957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
421-680
               

               
Cow position:
               
chr4:1499034-1499294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
424-640
               

               
Cow position:
               
chr4:34562542-34562307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
424-702
               

               
Cow position:
               
chr4:44449360-44449639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
128, 85
               

               
Conread position:
               
425-719
               

               
Cow position:
               
chr4:11218916-11218608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
426-621
               

               
Cow position:
               
chr4:45862572-45862370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
428-715
               

               
Cow position:
               
chr4:6653881-6653583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
431-574
               

               
Cow position:
               
chr4:56805326-56805182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
431-720
               

               
Cow position:
               
chr4:38999579-38999273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
432-694
               

               
Cow position:
               
chr4:45074212-45073939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 211
               

               
Conread position:
               
432-714
               

               
Cow position:
               
chr4:20157271-20157563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
432-719
               

               
Cow position:
               
chr4:22344866-22345168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
433-698
               

               
Cow position:
               
chr4:65265157-65265440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
433-702
               

               
Cow position:
               
chr4:63964839-63965122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 213
               

               
Conread position:
               
434-715
               

               
Cow position:
               
chr4:13256226-13255942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
436-719
               

               
Cow position:
               
chr4:46455916-46456211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
441-719
               

               
Cow position:
               
chr4:37344290-37344579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
449-711
               

               
Cow position:
               
chr4:2602364-2602089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
450-720
               

               
Cow position:
               
chr4:46597501-46597224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
454-714
               

               
Cow position:
               
chr4:5999079-5999334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 8
               

               
Conread position:
               
457-693
               

               
Cow position:
               
chr4:44838769-44839014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr4:8705119-8704856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
457-714
               

               
Cow position:
               
chr4:33091499-33091234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
457-715
               

               
Cow position:
               
chr4:34211293-34211012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
457-720
               

               
Cow position:
               
chr4:46591794-46591513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
460-652
               

               
Cow position:
               
chr4:1994-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
460-670
               

               
Cow position:
               
chr4:47510507-47510288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
460-679
               

               
Cow position:
               
chr4:45013056-45013275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
460-680
               

               
Cow position:
               
chr4:19098595-19098357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 217
               

               
Conread position:
               
460-683
               

               
Cow position:
               
chr4:37675737-37675500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
460-694
               

               
Cow position:
               
chr4:45367862-45367610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
460-699
               

               
Cow position:
               
chr4:42481304-42481060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
460-700
               

               
Cow position:
               
chr4:48173259-48173007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 183
               

               
Conread position:
               
460-702
               

               
Cow position:
               
chr4:47280250-47280005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
460-710
               

               
Cow position:
               
chr4:4843122-4843388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
460-711
               

               
Cow position:
               
chr4:30792089-30791826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
460-711
               

               
Cow position:
               
chr4:58880839-58881105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
460-711
               

               
Cow position:
               
chr4:65815585-65815840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr4:44782497-44782227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr4:59378032-59377768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
460-715
               

               
Cow position:
               
chr4:63349368-63349623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 141
               

               
Conread position:
               
460-720
               

               
Cow position:
               
chr4:37502936-37502664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
461-693
               

               
Cow position:
               
chr4:10905348-10905590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
461-698
               

               
Cow position:
               
chr4:49089908-49089659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 118
               

               
Conread position:
               
461-715
               

               
Cow position:
               
chr4:32726347-32726080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
462-693
               

               
Cow position:
               
chr4:41185797-41186034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
462-714
               

               
Cow position:
               
chr4:41300877-41301136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
462-715
               

               
Cow position:
               
chr4:25879511-25879249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
462-715
               

               
Cow position:
               
chr4:39128658-39128387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
464-694
               

               
Cow position:
               
chr4:13941575-13941337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
464-715
               

               
Cow position:
               
chr4:26401073-26400814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
464-715
               

               
Cow position:
               
chr4:36731309-36731048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 161
               

               
Conread position:
               
464-715
               

               
Cow position:
               
chr4:61313094-61313354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
464-720
               

               
Cow position:
               
chr4:48143954-48143676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
465-684
               

               
Cow position:
               
chr4:22725208-22724988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 144
               

               
Conread position:
               
465-686
               

               
Cow position:
               
chr4:11380397-11380166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:19321960-19322229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:21874920-21874670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:36893477-36893211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 241
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:47348944-47348681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 238
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:62771805-62772071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
465-715
               

               
Cow position:
               
chr4:65650017-65650271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
466-720
               

               
Cow position:
               
chr4:69543299-69543027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
467-714
               

               
Cow position:
               
chr4:11496535-11496777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
467-720
               

               
Cow position:
               
chr4:45738359-45738629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 240
               

               
Conread position:
               
468-709
               

               
Cow position:
               
chr4:65175030-65175279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
468-715
               

               
Cow position:
               
chr4:43865742-43866004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 249
               

               
Conread position:
               
469-664
               

               
Cow position:
               
chr4:45563860-45563646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
472-715
               

               
Cow position:
               
chr4:27755193-27755447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
473-678
               

               
Cow position:
               
chr4:45595922-45596140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
476-702
               

               
Cow position:
               
chr4:24481566-24481797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
476-711
               

               
Cow position:
               
chr4:1495302-1495547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr4:36577520-36577776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
476-715
               

               
Cow position:
               
chr4:55395868-55395614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
476-719
               

               
Cow position:
               
chr4:10056311-10056058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
477-695
               

               
Cow position:
               
chr4:65950760-65950528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
477-711
               

               
Cow position:
               
chr4:13973864-13974111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
477-715
               

               
Cow position:
               
chr4:3850657-3850410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 213
               

               
Conread position:
               
477-715
               

               
Cow position:
               
chr4:51784285-51784032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
478-714
               

               
Cow position:
               
chr4:21017-20773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
478-715
               

               
Cow position:
               
chr4:5460757-5461008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
482-698
               

               
Cow position:
               
chr4:46183514-46183279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
487-703
               

               
Cow position:
               
chr4:38952649-38952418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 218
               

               
Conread position:
               
488-715
               

               
Cow position:
               
chr4:3990546-3990770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
493-710
               

               
Cow position:
               
chr4:33395608-33395835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 165
               

               
Conread position:
               
493-715
               

               
Cow position:
               
chr4:16601973-16602199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
495-715
               

               
Cow position:
               
chr4:25359676-25359462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
495-720
               

               
Cow position:
               
chr4:65432238-65431999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 210
               

               
Conread position:
               
498-715
               

               
Cow position:
               
chr4:33421287-33421507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
498-720
               

               
Cow position:
               
chr4:21371471-21371237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
525-699
               

               
Cow position:
               
chr4:18107109-18107290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
525-708
               

               
Cow position:
               
chr4:39231470-39231655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
525-708
               

               
Cow position:
               
chr4:52307571-52307751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
525-714
               

               
Cow position:
               
chr4:51739666-51739854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:11332148-11331946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:21232823-21233020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 172
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:23854231-23854050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:29237119-29237304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:38705722-38705921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
525-715
               

               
Cow position:
               
chr4:45711414-45711223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
525-720
               

               
Cow position:
               
chr4:54930371-54930576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
528-715
               

               
Cow position:
               
chr4:1354577-1354764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
528-715
               

               
Cow position:
               
chr4:9571103-9570903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
530-710
               

               
Cow position:
               
chr4:32249214-32249393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
166, 48
               

               
Conread position:
               
531-715
               

               
Cow position:
               
chr4:17474484-17474290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
533-715
               

               
Cow position:
               
chr4:35939964-35940154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
535-715
               

               
Cow position:
               
chr4:37619847-37620034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
536-684
               

               
Cow position:
               
chr4:7129743-7129898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
536-715
               

               
Cow position:
               
chr4:14920029-14919848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
536-719
               

               
Cow position:
               
chr4:21516963-21517155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
540-714
               

               
Cow position:
               
chr4:63119203-63119387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
541-699
               

               
Cow position:
               
chr4:28543577-28543731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
541-715
               

               
Cow position:
               
chr4:19423415-19423241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
543-714
               

               
Cow position:
               
chr4:23911561-23911731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
544-715
               

               
Cow position:
               
chr4:11201852-11201670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
544-715
               

               
Cow position:
               
chr4:11671484-11671309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
549-715
               

               
Cow position:
               
chr4:11099644-11099815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
550-715
               

               
Cow position:
               
chr4:46720141-46720310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
550-719
               

               
Cow position:
               
chr4:24118881-24119059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
551-720
               

               
Cow position:
               
chr4:1405555-1405379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
552-716
               

               
Cow position:
               
chr4:52166836-52167000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
555-711
               

               
Cow position:
               
chr4:54851097-54851262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
555-720
               

               
Cow position:
               
chr4:43749792-43749959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
556-703
               

               
Cow position:
               
chr4:26011870-26011718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
556-720
               

               
Cow position:
               
chr4:68855661-68855500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
558-700
               

               
Cow position:
               
chr4:30929616-30929469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
566-711
               

               
Cow position:
               
chr4:5047333-5047480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
567-715
               

               
Cow position:
               
chr4:19561686-19561538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
567-719
               

               
Cow position:
               
chr4:43495903-43495751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
571-703
               

               
Cow position:
               
chr4:54975297-54975164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr4:33869656-33869515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr4:65538416-65538564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
571-715
               

               
Cow position:
               
chr4:69386088-69385947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
571-720
               

               
Cow position:
               
chr4:48137913-48137759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
574-715
               

               
Cow position:
               
chr4:11901563-11901709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
574-715
               

               
Cow position:
               
chr4:34924692-34924835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
574-715
               

               
Cow position:
               
chr4:65891990-65891843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
574-720
               

               
Cow position:
               
chr4:53999512-53999660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
579-715
               

               
Cow position:
               
chr4:36725027-36724892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
580-710
               

               
Cow position:
               
chr4:47290063-47289933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr4:17660202-17660340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr4:27687912-27687777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
580-715
               

               
Cow position:
               
chr4:43369861-43370000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
580-718
               

               
Cow position:
               
chr4:26746468-26746332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
580-720
               

               
Cow position:
               
chr4:43909730-43909590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
586-715
               

               
Cow position:
               
chr4:38887151-38887283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
587-715
               

               
Cow position:
               
chr4:1237136-1237263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
589-693
               

               
Cow position:
               
chr4:54937027-54936922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
594-709
               

               
Cow position:
               
chr4:39009941-39009826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
595-715
               

               
Cow position:
               
chr4:46370789-46370668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
597-715
               

               
Cow position:
               
chr4:54667717-54667836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
605-714
               

               
Cow position:
               
chr4:57555935-57555825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
606-711
               

               
Cow position:
               
chr4:54501486-54501591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
607-719
               

               
Cow position:
               
chr4:67392921-67392808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               
Show alignments to all cow chromosomes.