Cow genome map

Conread name: Ss1.1-Mixc-0027f08.3

Conread position: 308-656
Cow position: chrX:35986133-35985764 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 26

Conread position: 319-568
Cow position: chrX:35410056-35409794 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 20

Conread position: 322-594
Cow position: chrX:20345758-20345465 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 322-710
Cow position: chrX:21663596-21663205 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 13

Conread position: 331-572
Cow position: chrX:27270661-27270413 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 19

Conread position: 337-715
Cow position: chrX:6488845-6488464 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 17

Conread position: 341-520
Cow position: chrX:41199499-41199324 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 343-620
Cow position: chrX:48019853-48020134 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 19

Conread position: 343-642
Cow position: chrX:17956972-17956655 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 343-715
Cow position: chrX:42246901-42247297 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 345-578
Cow position: chrX:44995773-44995530 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 114, 10

Conread position: 345-694
Cow position: chrX:152181-151813 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 26

Conread position: 345-720
Cow position: chrX:20339617-20340005 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 346-715
Cow position: chrX:35885453-35885842 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 300

Conread position: 348-718
Cow position: chrX:30133050-30133437 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 83

Conread position: 348-720
Cow position: chrX:46588095-46587700 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 32

Conread position: 349-709
Cow position: chrX:18204194-18204569 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 49

Conread position: 350-574
Cow position: chrX:32574593-32574353 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 29

Conread position: 350-634
Cow position: chrX:41941894-41941594 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 25

Conread position: 350-658
Cow position: chrX:22624732-22624417 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 46

Conread position: 350-667
Cow position: chrX:2674687-2675022 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 16

Conread position: 351-696
Cow position: chrX:45139659-45140007 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 243

Conread position: 351-704
Cow position: chrX:15231391-15231759 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 112, 22

Conread position: 351-705
Cow position: chrX:34222973-34222613 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 111, 10

Conread position: 353-515
Cow position: chrX:23485797-23485623 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 21

Conread position: 353-517
Cow position: chrX:47100325-47100497 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 0

Conread position: 353-670
Cow position: chrX:5134736-5134404 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 22

Conread position: 353-693
Cow position: chrX:29050513-29050156 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 79

Conread position: 354-649
Cow position: chrX:36367667-36367989 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 15

Conread position: 354-693
Cow position: chrX:20887385-20887730 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 8

Conread position: 354-719
Cow position: chrX:21672833-21672439 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 8

Conread position: 355-590
Cow position: chrX:16836027-16836270 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 174, 0

Conread position: 355-715
Cow position: chrX:37489993-37489614 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 37

Conread position: 356-574
Cow position: chrX:28068118-28067886 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 40

Conread position: 357-574
Cow position: chrX:40337174-40336947 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 23

Conread position: 357-699
Cow position: chrX:31436737-31436382 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 274

Conread position: 357-715
Cow position: chrX:42492250-42492627 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 156

Conread position: 358-577
Cow position: chrX:876584-876809 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 39

Conread position: 358-702
Cow position: chrX:34412111-34411743 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 13

Conread position: 361-527
Cow position: chrX:26720432-26720592 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 361-528
Cow position: chrX:9451599-9451434 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 6

Conread position: 362-715
Cow position: chrX:8925947-8925589 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 362-715
Cow position: chrX:37956105-37955721 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 63

Conread position: 362-719
Cow position: chrX:26493266-26492890 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 37

Conread position: 363-715
Cow position: chrX:22386982-22387355 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 364-573
Cow position: chrX:42875469-42875250 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 215

Conread position: 365-719
Cow position: chrX:28632227-28632599 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 14

Conread position: 366-689
Cow position: chrX:31489776-31489433 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 27

Conread position: 366-703
Cow position: chrX:21328168-21327803 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 28

Conread position: 366-718
Cow position: chrX:14955511-14955880 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 141

Conread position: 367-662
Cow position: chrX:27511680-27511367 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 101

Conread position: 367-719
Cow position: chrX:4403571-4403198 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 8

Conread position: 368-518
Cow position: chrX:783701-783543 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 368-529
Cow position: chrX:14135925-14135766 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 21

Conread position: 368-584
Cow position: chrX:14925527-14925300 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 368-663
Cow position: chrX:7648160-7648462 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 10

Conread position: 368-684
Cow position: chrX:22284093-22283750 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 290

Conread position: 368-694
Cow position: chrX:44040435-44040108 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 238

Conread position: 368-699
Cow position: chrX:12095515-12095870 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 369-690
Cow position: chrX:41871310-41870976 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 160, 79

Conread position: 369-714
Cow position: chrX:7722226-7721878 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 28

Conread position: 370-566
Cow position: chrX:41453553-41453346 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 370-696
Cow position: chrX:31250643-31250293 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 370-714
Cow position: chrX:39938287-39938631 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 204, 9

Conread position: 371-517
Cow position: chrX:42216384-42216531 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 24

Conread position: 371-528
Cow position: chrX:39886960-39887125 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 371-529
Cow position: chrX:30958980-30958818 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 51

Conread position: 371-563
Cow position: chrX:6389329-6389128 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 106, 26

Conread position: 371-715
Cow position: chrX:29601579-29601942 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 371-715
Cow position: chrX:41027412-41027045 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 344

Conread position: 371-719
Cow position: chrX:8917647-8917280 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 136

Conread position: 372-576
Cow position: chrX:35392055-35392260 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 157, 56

Conread position: 373-510
Cow position: chrX:42220451-42220595 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 373-528
Cow position: chrX:1101800-1101646 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 99

Conread position: 373-593
Cow position: chrX:16763681-16763908 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 153, 0

Conread position: 373-665
Cow position: chrX:127004-126706 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 37

Conread position: 373-681
Cow position: chrX:25815648-25815985 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 137

Conread position: 373-710
Cow position: chrX:8869155-8869509 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 91, 336

Conread position: 374-508
Cow position: chrX:19595759-19595631 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 374-710
Cow position: chrX:47484008-47484375 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 375-528
Cow position: chrX:1571349-1571500 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 375-528
Cow position: chrX:26881832-26881991 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 375-568
Cow position: chrX:11517732-11517938 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 22

Conread position: 375-573
Cow position: chrX:8642290-8642083 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 80, 19

Conread position: 375-574
Cow position: chrX:11781498-11781289 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 147

Conread position: 375-576
Cow position: chrX:35285421-35285207 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 375-610
Cow position: chrX:2936202-2935953 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 233

Conread position: 375-715
Cow position: chrX:27508777-27509132 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 137

Conread position: 376-462
Cow position: chrX:31323645-31323559 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 376-469
Cow position: chrX:33657180-33657090 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 376-499
Cow position: chrX:32590159-32590288 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 376-528
Cow position: chrX:11589122-11589278 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 22

Conread position: 376-528
Cow position: chrX:42314642-42314803 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 376-556
Cow position: chrX:39488965-39489137 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 376-566
Cow position: chrX:11674358-11674158 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 131

Conread position: 376-654
Cow position: chrX:9361132-9360836 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 133

Conread position: 376-662
Cow position: chrX:39353017-39352720 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 157, 21

Conread position: 376-668
Cow position: chrX:38321139-38321453 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 18

Conread position: 376-689
Cow position: chrX:20881716-20882024 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 22

Conread position: 376-694
Cow position: chrX:4268825-4269153 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 153, 21

Conread position: 376-694
Cow position: chrX:45598361-45598693 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 376-715
Cow position: chrX:9650780-9651137 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 291

Conread position: 376-715
Cow position: chrX:43050316-43049949 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 307

Conread position: 376-719
Cow position: chrX:20677609-20677256 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 88, 21

Conread position: 376-720
Cow position: chrX:30337707-30338058 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 249

Conread position: 376-720
Cow position: chrX:38218960-38218592 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 292

Conread position: 377-563
Cow position: chrX:42461377-42461571 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 377-572
Cow position: chrX:5487704-5487894 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 377-664
Cow position: chrX:20957485-20957186 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 195

Conread position: 377-704
Cow position: chrX:46532247-46532602 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 80, 22

Conread position: 377-714
Cow position: chrX:34441206-34441563 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 218

Conread position: 377-715
Cow position: chrX:25207617-25207955 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 20

Conread position: 377-719
Cow position: chrX:36356349-36356002 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 167

Conread position: 377-719
Cow position: chrX:46032482-46032837 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 52

Conread position: 377-720
Cow position: chrX:24332022-24331661 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 78, 216

Conread position: 378-517
Cow position: chrX:20666659-20666793 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 0

Conread position: 378-521
Cow position: chrX:16801023-16801170 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 47

Conread position: 378-606
Cow position: chrX:27668720-27668960 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 13

Conread position: 378-697
Cow position: chrX:27261435-27261093 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 378-719
Cow position: chrX:5637932-5638281 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 142

Conread position: 379-510
Cow position: chrX:42165377-42165507 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 19

Conread position: 379-528
Cow position: chrX:33466864-33466713 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 18

Conread position: 379-567
Cow position: chrX:4289678-4289487 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 86

Conread position: 379-567
Cow position: chrX:27442293-27442496 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 379-574
Cow position: chrX:4092163-4091960 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 15

Conread position: 379-587
Cow position: chrX:19018586-19018812 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 18

Conread position: 379-590
Cow position: chrX:4327939-4328167 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 127

Conread position: 379-593
Cow position: chrX:11762769-11762988 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 150, 13

Conread position: 379-619
Cow position: chrX:17966567-17966327 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 19

Conread position: 379-697
Cow position: chrX:4152801-4153132 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 89

Conread position: 379-715
Cow position: chrX:16763009-16762654 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 12

Conread position: 380-556
Cow position: chrX:15100222-15100037 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 62

Conread position: 380-635
Cow position: chrX:38642478-38642216 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 13

Conread position: 380-715
Cow position: chrX:6234244-6234565 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 191, 14

Conread position: 380-715
Cow position: chrX:44961998-44961636 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 381-469
Cow position: chrX:22134780-22134868 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 381-520
Cow position: chrX:28107086-28106944 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 16

Conread position: 381-528
Cow position: chrX:37717963-37717810 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 381-567
Cow position: chrX:31983336-31983542 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 381-609
Cow position: chrX:26205217-26205454 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 27

Conread position: 381-609
Cow position: chrX:39290596-39290357 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 111

Conread position: 381-626
Cow position: chrX:17744862-17744616 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 220

Conread position: 381-640
Cow position: chrX:11325868-11326138 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 22

Conread position: 381-640
Cow position: chrX:19394795-19394514 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 17

Conread position: 381-640
Cow position: chrX:42894163-42893879 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 0

Conread position: 381-640
Cow position: chrX:48558986-48558709 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 16

Conread position: 381-668
Cow position: chrX:5063476-5063187 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 16

Conread position: 381-669
Cow position: chrX:13122184-13121863 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 16

Conread position: 381-693
Cow position: chrX:22115073-22115409 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 381-714
Cow position: chrX:44656726-44657074 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 50

Conread position: 381-715
Cow position: chrX:3580186-3579832 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 283

Conread position: 381-715
Cow position: chrX:4399358-4399017 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 381-715
Cow position: chrX:7351543-7351187 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 381-715
Cow position: chrX:15146957-15147301 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 381-719
Cow position: chrX:29723990-29723625 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 76, 18

Conread position: 381-720
Cow position: chrX:4632613-4632969 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 210

Conread position: 382-507
Cow position: chrX:34991600-34991474 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 15

Conread position: 382-531
Cow position: chrX:42159180-42159027 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 15

Conread position: 382-572
Cow position: chrX:23358877-23359073 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 382-572
Cow position: chrX:32867110-32866913 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 382-599
Cow position: chrX:32877140-32877367 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 16

Conread position: 382-687
Cow position: chrX:8493306-8492996 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 35

Conread position: 382-689
Cow position: chrX:6559215-6559532 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 382-698
Cow position: chrX:161638-161317 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 12

Conread position: 382-710
Cow position: chrX:32019893-32020229 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 211

Conread position: 382-715
Cow position: chrX:5118258-5118614 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 87, 282

Conread position: 382-715
Cow position: chrX:33539390-33539053 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 191, 16

Conread position: 382-715
Cow position: chrX:34554965-34554612 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 382-715
Cow position: chrX:42927589-42927931 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 18, 58

Conread position: 382-719
Cow position: chrX:41674339-41673992 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 45

Conread position: 383-567
Cow position: chrX:20583899-20583709 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 42

Conread position: 383-574
Cow position: chrX:37749755-37749947 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 146, 25

Conread position: 383-591
Cow position: chrX:31480203-31479986 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 19

Conread position: 383-618
Cow position: chrX:42432272-42432528 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 383-641
Cow position: chrX:27306677-27306413 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 15

Conread position: 383-699
Cow position: chrX:20168792-20168461 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 10

Conread position: 383-714
Cow position: chrX:11614914-11614588 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 44

Conread position: 383-714
Cow position: chrX:13924098-13923760 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 10

Conread position: 383-714
Cow position: chrX:28846654-28846993 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 22

Conread position: 383-715
Cow position: chrX:25338402-25338071 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 191, 14

Conread position: 383-719
Cow position: chrX:18486042-18485682 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 122

Conread position: 383-719
Cow position: chrX:28013202-28013564 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 11

Conread position: 384-475
Cow position: chrX:3543102-3543012 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 384-517
Cow position: chrX:27202806-27202670 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 14

Conread position: 384-578
Cow position: chrX:28850956-28850759 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 384-616
Cow position: chrX:3806917-3806670 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 95

Conread position: 384-619
Cow position: chrX:42836416-42836168 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 17

Conread position: 384-682
Cow position: chrX:39220325-39220000 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 14

Conread position: 384-715
Cow position: chrX:21593528-21593175 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 385-528
Cow position: chrX:33678234-33678384 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 12

Conread position: 385-616
Cow position: chrX:20677904-20678152 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 193

Conread position: 386-689
Cow position: chrX:10859077-10859385 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 71, 111

Conread position: 386-709
Cow position: chrX:15485397-15485733 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 204

Conread position: 386-715
Cow position: chrX:38549682-38549340 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 386-719
Cow position: chrX:47279699-47280048 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 119

Conread position: 386-720
Cow position: chrX:44397246-44396902 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 387-528
Cow position: chrX:28167214-28167068 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 387-694
Cow position: chrX:47873100-47873429 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 387-715
Cow position: chrX:36283574-36283237 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 387-719
Cow position: chrX:12309150-12309501 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 269

Conread position: 388-501
Cow position: chrX:19161896-19162015 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 388-528
Cow position: chrX:1938246-1938103 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 9

Conread position: 388-554
Cow position: chrX:5915425-5915244 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 388-602
Cow position: chrX:19761983-19761759 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 141, 216

Conread position: 388-648
Cow position: chrX:36391954-36392234 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 115

Conread position: 388-699
Cow position: chrX:36393105-36393443 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 182

Conread position: 389-521
Cow position: chrX:41194138-41194001 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 53

Conread position: 389-572
Cow position: chrX:44123482-44123293 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 130, 58

Conread position: 389-665
Cow position: chrX:296625-296332 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 117

Conread position: 389-685
Cow position: chrX:41238129-41238434 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 86

Conread position: 389-689
Cow position: chrX:40680848-40680524 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 389-698
Cow position: chrX:38560783-38560462 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 249

Conread position: 389-715
Cow position: chrX:11633915-11633566 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 389-715
Cow position: chrX:31729670-31729331 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 306

Conread position: 389-715
Cow position: chrX:42380879-42381214 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 86, 36

Conread position: 389-718
Cow position: chrX:35822564-35822227 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 98, 39

Conread position: 390-524
Cow position: chrX:26367470-26367610 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 390-576
Cow position: chrX:43008842-43008643 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 390-577
Cow position: chrX:11454406-11454219 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 132, 85

Conread position: 390-590
Cow position: chrX:4559966-4559755 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 170

Conread position: 390-620
Cow position: chrX:35276218-35275968 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 390-657
Cow position: chrX:44339089-44339379 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 33

Conread position: 390-659
Cow position: chrX:19469283-19469563 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 88

Conread position: 390-699
Cow position: chrX:34836842-34837150 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 12

Conread position: 390-709
Cow position: chrX:32330403-32330052 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 187

Conread position: 390-715
Cow position: chrX:9201775-9201438 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 80

Conread position: 390-715
Cow position: chrX:27431692-27432026 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 35

Conread position: 390-720
Cow position: chrX:31948702-31949053 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 81, 290

Conread position: 391-528
Cow position: chrX:35509449-35509590 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 391-531
Cow position: chrX:11670918-11670772 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 391-548
Cow position: chrX:1996220-1996385 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 391-558
Cow position: chrX:4169797-4169979 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 117

Conread position: 391-562
Cow position: chrX:37867485-37867301 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 391-567
Cow position: chrX:8759854-8759668 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 154
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 391-574
Cow position: chrX:1719334-1719151 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 35

Conread position: 391-574
Cow position: chrX:1960194-1960389 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 391-574
Cow position: chrX:2314387-2314583 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 391-574
Cow position: chrX:17498554-17498358 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 391-574
Cow position: chrX:19717742-19717557 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 34

Conread position: 391-574
Cow position: chrX:46910039-46909851 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 138, 37

Conread position: 391-577
Cow position: chrX:37751880-37752073 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 67

Conread position: 391-586
Cow position: chrX:24170494-24170709 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 391-622
Cow position: chrX:42449782-42450035 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 391-633
Cow position: chrX:26979560-26979809 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 38

Conread position: 391-636
Cow position: chrX:48474136-48473873 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 18

Conread position: 391-655
Cow position: chrX:11825412-11825693 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 217

Conread position: 391-665
Cow position: chrX:13147215-13146918 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 255

Conread position: 391-670
Cow position: chrX:40574712-40574994 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 178

Conread position: 391-683
Cow position: chrX:9251932-9252243 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 391-688
Cow position: chrX:35590527-35590843 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 113

Conread position: 391-689
Cow position: chrX:48071393-48071074 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 77, 249

Conread position: 391-693
Cow position: chrX:33654612-33654932 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 200

Conread position: 391-694
Cow position: chrX:4296593-4296912 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 79, 224

Conread position: 391-694
Cow position: chrX:27705818-27705495 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 391-694
Cow position: chrX:44192211-44192535 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 288

Conread position: 391-699
Cow position: chrX:17231968-17231635 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 296

Conread position: 391-702
Cow position: chrX:48262836-48262507 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 106

Conread position: 391-703
Cow position: chrX:33001129-33000803 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 83

Conread position: 391-703
Cow position: chrX:40826519-40826854 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 391-709
Cow position: chrX:22813296-22812958 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 70, 199

Conread position: 391-710
Cow position: chrX:18111610-18111283 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 200

Conread position: 391-710
Cow position: chrX:21642250-21642585 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 245

Conread position: 391-710
Cow position: chrX:22921552-22921209 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 79, 130

Conread position: 391-710
Cow position: chrX:23563559-23563900 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 80, 224

Conread position: 391-710
Cow position: chrX:38935510-38935178 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 121

Conread position: 391-714
Cow position: chrX:15546112-15545782 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 39

Conread position: 391-714
Cow position: chrX:37541324-37541011 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 185, 80

Conread position: 391-715
Cow position: chrX:869951-870282 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 78, 108

Conread position: 391-715
Cow position: chrX:3654834-3654496 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 60

Conread position: 391-715
Cow position: chrX:12979604-12979939 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 267

Conread position: 391-715
Cow position: chrX:30962644-30962986 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 391-715
Cow position: chrX:38094295-38094635 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 391-715
Cow position: chrX:41878706-41879044 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 282

Conread position: 391-719
Cow position: chrX:11844005-11844363 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 297

Conread position: 391-719
Cow position: chrX:12250046-12249687 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 317

Conread position: 391-719
Cow position: chrX:36976179-36975833 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 14

Conread position: 391-720
Cow position: chrX:27175231-27174878 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 392-517
Cow position: chrX:31279697-31279824 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 392-519
Cow position: chrX:38726914-38727040 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 392-528
Cow position: chrX:11602258-11602396 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 68, 5

Conread position: 392-574
Cow position: chrX:2551306-2551127 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 5

Conread position: 392-582
Cow position: chrX:16555993-16556189 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 125

Conread position: 392-610
Cow position: chrX:32910326-32910101 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 5

Conread position: 392-664
Cow position: chrX:4109415-4109128 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 77, 215

Conread position: 392-710
Cow position: chrX:40320638-40320298 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 262

Conread position: 392-711
Cow position: chrX:34504823-34505155 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 93

Conread position: 392-715
Cow position: chrX:34792093-34792420 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 142, 33

Conread position: 392-715
Cow position: chrX:35269086-35268770 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 392-715
Cow position: chrX:39558154-39558462 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 182, 5

Conread position: 393-558
Cow position: chrX:12972-12802 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 393-587
Cow position: chrX:51673-51871 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 174

Conread position: 393-590
Cow position: chrX:17524154-17524368 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 393-610
Cow position: chrX:42480056-42479830 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 28

Conread position: 393-616
Cow position: chrX:16984864-16984632 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 114

Conread position: 393-627
Cow position: chrX:23335746-23335985 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 184

Conread position: 393-694
Cow position: chrX:25035152-25035471 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 393-695
Cow position: chrX:27446912-27446604 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 82, 202

Conread position: 393-702
Cow position: chrX:45110880-45110557 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 308

Conread position: 393-715
Cow position: chrX:20584541-20584212 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 66, 92

Conread position: 393-715
Cow position: chrX:34315756-34315413 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 278

Conread position: 393-715
Cow position: chrX:38964326-38963993 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 66

Conread position: 394-515
Cow position: chrX:14900282-14900400 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 66

Conread position: 394-520
Cow position: chrX:10479978-10479846 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 394-527
Cow position: chrX:17929226-17929091 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 394-528
Cow position: chrX:3494822-3494958 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 394-528
Cow position: chrX:34270789-34270650 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 0

Conread position: 394-566
Cow position: chrX:597250-597430 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 394-569
Cow position: chrX:46068536-46068718 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 18

Conread position: 394-574
Cow position: chrX:41790199-41790393 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 394-579
Cow position: chrX:34398555-34398753 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 112

Conread position: 394-590
Cow position: chrX:35390535-35390723 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 45

Conread position: 394-591
Cow position: chrX:19356692-19356484 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 60, 0

Conread position: 394-638
Cow position: chrX:28940472-28940210 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 78, 198

Conread position: 394-666
Cow position: chrX:12437055-12437334 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 138, 63

Conread position: 394-674
Cow position: chrX:25037220-25036915 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 394-695
Cow position: chrX:42855691-42855362 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 278

Conread position: 394-699
Cow position: chrX:12290946-12290630 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 270

Conread position: 394-703
Cow position: chrX:24365594-24365927 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 394-708
Cow position: chrX:34377167-34376842 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 80, 221

Conread position: 394-709
Cow position: chrX:40183126-40183452 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 112

Conread position: 394-710
Cow position: chrX:4825620-4825932 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 134, 65

Conread position: 394-710
Cow position: chrX:10959188-10959504 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 184, 104

Conread position: 394-710
Cow position: chrX:34454887-34454557 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 195

Conread position: 394-710
Cow position: chrX:47610018-47609699 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 196

Conread position: 394-711
Cow position: chrX:34565513-34565175 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 102

Conread position: 394-714
Cow position: chrX:6544473-6544145 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 70

Conread position: 394-715
Cow position: chrX:1499882-1499553 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 78

Conread position: 394-715
Cow position: chrX:11656306-11655980 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 211

Conread position: 394-715
Cow position: chrX:13177256-13177577 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 31

Conread position: 394-715
Cow position: chrX:14883729-14884070 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 316

Conread position: 394-715
Cow position: chrX:15006931-15007262 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 394-715
Cow position: chrX:26881334-26881680 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 47

Conread position: 394-715
Cow position: chrX:31442611-31442934 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 70

Conread position: 394-715
Cow position: chrX:45977152-45976808 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 38

Conread position: 394-716
Cow position: chrX:40175404-40175054 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 163

Conread position: 394-716
Cow position: chrX:44055031-44054689 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 394-717
Cow position: chrX:17949264-17949604 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 203

Conread position: 394-719
Cow position: chrX:1503536-1503222 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 66

Conread position: 394-719
Cow position: chrX:10865642-10865984 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 186

Conread position: 394-720
Cow position: chrX:9425534-9425857 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 77, 51

Conread position: 394-720
Cow position: chrX:40035214-40035559 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 14

Conread position: 394-720
Cow position: chrX:42994824-42994499 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 127

Conread position: 395-577
Cow position: chrX:35681795-35681601 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 88

Conread position: 395-609
Cow position: chrX:29478949-29478722 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 395-635
Cow position: chrX:11653994-11653733 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 395-647
Cow position: chrX:4645687-4645957 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 229

Conread position: 395-685
Cow position: chrX:16575326-16575040 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 135, 31

Conread position: 396-702
Cow position: chrX:10516480-10516157 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 281

Conread position: 396-710
Cow position: chrX:46023001-46022681 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 173

Conread position: 396-713
Cow position: chrX:35224502-35224187 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 163, 79

Conread position: 396-719
Cow position: chrX:29544661-29544994 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 93, 7

Conread position: 397-702
Cow position: chrX:10829660-10829333 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 397-715
Cow position: chrX:11938728-11939039 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 162, 78

Conread position: 397-715
Cow position: chrX:38654207-38654542 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 66, 155

Conread position: 398-503
Cow position: chrX:19690626-19690523 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 398-517
Cow position: chrX:13893030-13892917 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 398-528
Cow position: chrX:5097570-5097707 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 20

Conread position: 398-528
Cow position: chrX:43028453-43028321 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 398-572
Cow position: chrX:8327129-8326942 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 398-573
Cow position: chrX:42760477-42760289 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 398-590
Cow position: chrX:1122323-1122527 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 23

Conread position: 398-590
Cow position: chrX:38302038-38301825 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 398-592
Cow position: chrX:42539771-42539578 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 66

Conread position: 398-595
Cow position: chrX:908165-907957 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 398-640
Cow position: chrX:22284907-22284671 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 192, 73

Conread position: 398-642
Cow position: chrX:27074827-27075087 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 209

Conread position: 398-651
Cow position: chrX:22392764-22393035 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 97

Conread position: 398-683
Cow position: chrX:47345554-47345253 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 214

Conread position: 398-686
Cow position: chrX:6414256-6413964 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 27

Conread position: 398-703
Cow position: chrX:34314245-34313929 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 77, 217

Conread position: 398-711
Cow position: chrX:7278130-7277811 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 33

Conread position: 398-711
Cow position: chrX:35382818-35383124 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 131, 208

Conread position: 398-711
Cow position: chrX:39415166-39415475 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 28

Conread position: 398-714
Cow position: chrX:1175766-1176090 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 134

Conread position: 398-715
Cow position: chrX:17662397-17662705 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 169, 69

Conread position: 398-715
Cow position: chrX:21986077-21986404 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 66

Conread position: 398-715
Cow position: chrX:23497473-23497780 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 91

Conread position: 398-715
Cow position: chrX:27145823-27145511 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 183

Conread position: 398-715
Cow position: chrX:29542004-29542331 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 125

Conread position: 398-715
Cow position: chrX:30420743-30421041 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 59

Conread position: 398-715
Cow position: chrX:35413818-35413508 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 137, 33

Conread position: 398-715
Cow position: chrX:48237041-48236705 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 228

Conread position: 398-719
Cow position: chrX:9634968-9635297 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 30

Conread position: 398-720
Cow position: chrX:46072606-46072936 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 66

Conread position: 399-568
Cow position: chrX:45759892-45759713 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 399-715
Cow position: chrX:7646459-7646144 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 81

Conread position: 399-715
Cow position: chrX:29121244-29120934 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 179, 60

Conread position: 399-715
Cow position: chrX:37780889-37781223 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 28

Conread position: 400-562
Cow position: chrX:41166607-41166777 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 400-579
Cow position: chrX:27415366-27415549 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 41

Conread position: 400-681
Cow position: chrX:36866395-36866092 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 116

Conread position: 400-693
Cow position: chrX:1466385-1466070 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 400-720
Cow position: chrX:41123267-41122951 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 57

Conread position: 401-710
Cow position: chrX:45875611-45875284 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 27

Conread position: 402-715
Cow position: chrX:20152068-20151734 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 71

Conread position: 402-715
Cow position: chrX:34544006-34543674 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 247

Conread position: 403-582
Cow position: chrX:40583094-40583273 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 124

Conread position: 403-703
Cow position: chrX:27515078-27514773 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 185

Conread position: 403-720
Cow position: chrX:40685110-40685450 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 304

Conread position: 404-715
Cow position: chrX:8900237-8899916 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 165

Conread position: 405-574
Cow position: chrX:34420953-34420770 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 405-629
Cow position: chrX:32318517-32318276 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 25

Conread position: 405-694
Cow position: chrX:13868921-13868610 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 405-708
Cow position: chrX:30922389-30922078 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 188

Conread position: 405-715
Cow position: chrX:6407761-6407437 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 275

Conread position: 405-715
Cow position: chrX:14973540-14973853 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 125, 59

Conread position: 405-715
Cow position: chrX:32821257-32820916 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 405-715
Cow position: chrX:43115366-43115039 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 72

Conread position: 406-528
Cow position: chrX:39094117-39094233 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 406-568
Cow position: chrX:10237697-10237870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 85

Conread position: 406-576
Cow position: chrX:31986356-31986540 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 83

Conread position: 406-578
Cow position: chrX:41809959-41810136 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 122, 64

Conread position: 406-579
Cow position: chrX:48822126-48822311 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 406-600
Cow position: chrX:28837100-28836906 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 406-660
Cow position: chrX:1360298-1360028 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 67

Conread position: 406-674
Cow position: chrX:38208338-38208615 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 128, 43

Conread position: 406-683
Cow position: chrX:41192905-41192627 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 43

Conread position: 406-691
Cow position: chrX:30840757-30840458 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 215

Conread position: 406-698
Cow position: chrX:43779649-43779942 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 107, 51

Conread position: 406-709
Cow position: chrX:1615842-1616150 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 48

Conread position: 406-715
Cow position: chrX:8731310-8730974 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 157

Conread position: 406-715
Cow position: chrX:27228345-27228011 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 406-719
Cow position: chrX:10831265-10831609 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 318

Conread position: 407-566
Cow position: chrX:41414925-41414767 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 50

Conread position: 407-567
Cow position: chrX:30824200-30824032 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 407-715
Cow position: chrX:4768943-4768632 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 152

Conread position: 407-715
Cow position: chrX:34238938-34238608 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 281

Conread position: 407-717
Cow position: chrX:32420426-32420105 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 210

Conread position: 407-719
Cow position: chrX:4278904-4279227 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 21

Conread position: 408-515
Cow position: chrX:4366559-4366448 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 408-719
Cow position: chrX:37119789-37119479 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 56

Conread position: 409-574
Cow position: chrX:47755831-47756004 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 409-694
Cow position: chrX:23113505-23113185 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 280

Conread position: 409-719
Cow position: chrX:28877953-28878285 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 215

Conread position: 410-692
Cow position: chrX:31515383-31515079 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 254

Conread position: 411-527
Cow position: chrX:25048891-25049011 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 412-715
Cow position: chrX:35543094-35542783 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 164

Conread position: 413-714
Cow position: chrX:22822264-22821940 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 222

Conread position: 413-715
Cow position: chrX:31294360-31294669 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 414-719
Cow position: chrX:41068928-41068603 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 116, 215

Conread position: 416-699
Cow position: chrX:47246553-47246843 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 140

Conread position: 417-675
Cow position: chrX:19965190-19965475 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 417-703
Cow position: chrX:4991819-4992115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 108

Conread position: 422-699
Cow position: chrX:40283323-40283029 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 423-660
Cow position: chrX:14275549-14275804 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 423-715
Cow position: chrX:17630622-17630915 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 37

Conread position: 424-709
Cow position: chrX:169343-169646 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 262

Conread position: 426-638
Cow position: chrX:23188593-23188813 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 128

Conread position: 426-719
Cow position: chrX:27302073-27301754 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 209

Conread position: 428-590
Cow position: chrX:39180039-39180217 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 429-711
Cow position: chrX:13382514-13382221 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 431-715
Cow position: chrX:31252599-31252306 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 148

Conread position: 432-680
Cow position: chrX:4515878-4515606 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 432-715
Cow position: chrX:28865814-28866111 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 147

Conread position: 438-715
Cow position: chrX:16416687-16416398 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 76

Conread position: 442-715
Cow position: chrX:24287753-24288036 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 185

Conread position: 443-720
Cow position: chrX:17888251-17888531 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 32

Conread position: 446-714
Cow position: chrX:43568092-43567811 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 257

Conread position: 447-693
Cow position: chrX:28134508-28134254 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 152

Conread position: 452-590
Cow position: chrX:31829296-31829445 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 453-715
Cow position: chrX:6278334-6278614 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 457-647
Cow position: chrX:31373696-31373500 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 128

Conread position: 457-658
Cow position: chrX:32977926-32978133 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 39

Conread position: 457-694
Cow position: chrX:46433650-46433399 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 26

Conread position: 457-694
Cow position: chrX:47046354-47046598 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 100

Conread position: 457-700
Cow position: chrX:37129429-37129171 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 221

Conread position: 457-715
Cow position: chrX:9416526-9416805 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 73, 18

Conread position: 460-659
Cow position: chrX:23092026-23091811 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 16

Conread position: 460-706
Cow position: chrX:16348416-16348673 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 17

Conread position: 460-709
Cow position: chrX:6690103-6690363 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 69, 182

Conread position: 460-710
Cow position: chrX:43730067-43730325 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 161

Conread position: 460-711
Cow position: chrX:40269651-40269380 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 28, 250

Conread position: 460-714
Cow position: chrX:38226953-38227206 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 50

Conread position: 460-715
Cow position: chrX:616103-616374 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 17

Conread position: 460-715
Cow position: chrX:618853-619116 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 17

Conread position: 460-715
Cow position: chrX:6265442-6265709 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 93

Conread position: 460-715
Cow position: chrX:9365519-9365787 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 163

Conread position: 460-715
Cow position: chrX:11084908-11085169 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 69, 25

Conread position: 460-715
Cow position: chrX:14599689-14599421 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 70, 38

Conread position: 460-715
Cow position: chrX:20697454-20697718 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 16

Conread position: 460-715
Cow position: chrX:23785803-23785545 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 17

Conread position: 460-715
Cow position: chrX:27516677-27516416 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 165

Conread position: 460-715
Cow position: chrX:34503077-34502810 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 141

Conread position: 460-715
Cow position: chrX:37836735-37836476 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 89

Conread position: 460-718
Cow position: chrX:7718989-7718741 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 116, 36

Conread position: 460-719
Cow position: chrX:10393953-10394214 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 27

Conread position: 460-719
Cow position: chrX:27393869-27394135 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 151

Conread position: 460-719
Cow position: chrX:36311727-36311462 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 119

Conread position: 460-720
Cow position: chrX:11717626-11717901 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 236

Conread position: 460-720
Cow position: chrX:23513869-23514134 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 14

Conread position: 461-715
Cow position: chrX:38728890-38728625 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 152

Conread position: 461-719
Cow position: chrX:6259992-6260274 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 462-671
Cow position: chrX:19097063-19097291 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 163

Conread position: 462-715
Cow position: chrX:31312184-31311917 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 204

Conread position: 464-641
Cow position: chrX:29553437-29553246 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 7

Conread position: 464-668
Cow position: chrX:15820747-15820531 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 146

Conread position: 464-700
Cow position: chrX:23562785-23562537 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 192

Conread position: 464-719
Cow position: chrX:33640128-33639855 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 221

Conread position: 464-720
Cow position: chrX:5872470-5872200 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 139

Conread position: 465-694
Cow position: chrX:25282887-25283106 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 157, 12

Conread position: 465-714
Cow position: chrX:8797401-8797141 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 147

Conread position: 465-715
Cow position: chrX:4043715-4043964 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 132

Conread position: 465-715
Cow position: chrX:27771816-27772073 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 100

Conread position: 465-719
Cow position: chrX:42873537-42873279 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 56, 128

Conread position: 466-673
Cow position: chrX:22914891-22915107 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 154

Conread position: 466-715
Cow position: chrX:5679421-5679678 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 151

Conread position: 467-715
Cow position: chrX:7710389-7710655 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 469-694
Cow position: chrX:5900610-5900377 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 104

Conread position: 472-719
Cow position: chrX:11082477-11082730 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 188

Conread position: 473-700
Cow position: chrX:45883828-45884072 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 9

Conread position: 476-629
Cow position: chrX:20743745-20743575 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 476-665
Cow position: chrX:6463739-6463548 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 100

Conread position: 476-694
Cow position: chrX:43527649-43527419 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 143

Conread position: 476-711
Cow position: chrX:878239-878485 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 195

Conread position: 476-715
Cow position: chrX:7695889-7695636 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 20

Conread position: 476-718
Cow position: chrX:29289719-29289465 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 24

Conread position: 477-694
Cow position: chrX:48385229-48385449 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 127

Conread position: 477-711
Cow position: chrX:17726116-17725866 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 227

Conread position: 477-714
Cow position: chrX:29194370-29194123 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 122

Conread position: 477-715
Cow position: chrX:5017282-5017526 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 79

Conread position: 477-720
Cow position: chrX:45113761-45113501 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 130

Conread position: 478-689
Cow position: chrX:36514753-36514981 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 41, 212

Conread position: 478-699
Cow position: chrX:29549412-29549644 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 27

Conread position: 478-711
Cow position: chrX:47657509-47657276 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 41

Conread position: 478-714
Cow position: chrX:29680122-29680371 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 146

Conread position: 478-715
Cow position: chrX:42235385-42235640 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 229

Conread position: 478-720
Cow position: chrX:11073052-11073307 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 175

Conread position: 479-715
Cow position: chrX:30543146-30543399 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 135

Conread position: 480-714
Cow position: chrX:37910581-37910335 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 9

Conread position: 480-720
Cow position: chrX:10411847-10412104 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 200

Conread position: 481-720
Cow position: chrX:917232-917481 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 211

Conread position: 482-715
Cow position: chrX:42171162-42171408 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 14

Conread position: 485-664
Cow position: chrX:23561990-23561799 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 120

Conread position: 485-689
Cow position: chrX:23939917-23940115 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 49

Conread position: 485-703
Cow position: chrX:47481928-47481700 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 83

Conread position: 485-711
Cow position: chrX:37232539-37232305 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 124

Conread position: 485-715
Cow position: chrX:19003410-19003188 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 82, 36

Conread position: 486-715
Cow position: chrX:1514288-1514519 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 111

Conread position: 487-694
Cow position: chrX:19690345-19690137 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 126

Conread position: 489-689
Cow position: chrX:11454921-11455133 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 209

Conread position: 489-715
Cow position: chrX:18694804-18695035 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 9

Conread position: 497-715
Cow position: chrX:21004803-21004570 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 5

Conread position: 497-719
Cow position: chrX:11856550-11856312 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 170

Conread position: 500-710
Cow position: chrX:45403708-45403937 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 128

Conread position: 500-710
Cow position: chrX:46722617-46722844 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 500-719
Cow position: chrX:26625554-26625787 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 173

Conread position: 502-715
Cow position: chrX:32747784-32747571 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 97

Conread position: 517-667
Cow position: chrX:43973638-43973479 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 523-715
Cow position: chrX:42507561-42507758 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 72

Conread position: 523-716
Cow position: chrX:13265540-13265736 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 74

Conread position: 524-715
Cow position: chrX:41744001-41743799 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 34

Conread position: 525-709
Cow position: chrX:1572054-1572244 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 88

Conread position: 525-709
Cow position: chrX:27945969-27946165 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 525-714
Cow position: chrX:15815169-15814976 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 138

Conread position: 525-715
Cow position: chrX:12405296-12405499 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 125

Conread position: 525-715
Cow position: chrX:21566492-21566290 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 525-715
Cow position: chrX:26440700-26440891 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 83

Conread position: 525-715
Cow position: chrX:27680483-27680287 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 143

Conread position: 525-715
Cow position: chrX:34402085-34401886 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 174

Conread position: 525-715
Cow position: chrX:43049415-43049236 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 525-716
Cow position: chrX:7571990-7571791 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 175

Conread position: 525-720
Cow position: chrX:2467969-2467764 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 120

Conread position: 525-720
Cow position: chrX:40480787-40480986 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 28

Conread position: 526-708
Cow position: chrX:29487923-29488107 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 88

Conread position: 528-703
Cow position: chrX:48044433-48044614 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 22

Conread position: 529-715
Cow position: chrX:27685329-27685135 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 529-715
Cow position: chrX:44873480-44873673 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 37

Conread position: 531-720
Cow position: chrX:37843798-37843603 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 98

Conread position: 533-715
Cow position: chrX:36961712-36961527 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 27

Conread position: 536-715
Cow position: chrX:11589514-11589700 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 77

Conread position: 536-715
Cow position: chrX:20710148-20709963 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 100

Conread position: 539-709
Cow position: chrX:12203325-12203494 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 152, 36

Conread position: 539-710
Cow position: chrX:47165815-47165993 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 62

Conread position: 540-711
Cow position: chrX:20790983-20790813 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 27

Conread position: 545-715
Cow position: chrX:19188996-19188825 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 52

Conread position: 550-708
Cow position: chrX:12018352-12018185 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 550-715
Cow position: chrX:41166902-41167077 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 551-710
Cow position: chrX:40567652-40567496 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 21

Conread position: 551-715
Cow position: chrX:41991986-41992158 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 65

Conread position: 555-719
Cow position: chrX:28845888-28845714 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 557-715
Cow position: chrX:42875034-42874869 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 56

Conread position: 560-703
Cow position: chrX:47209394-47209245 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 43

Conread position: 560-719
Cow position: chrX:40452166-40452325 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 64

Conread position: 565-716
Cow position: chrX:28157543-28157382 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 119

Conread position: 567-694
Cow position: chrX:31986822-31986954 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 569-711
Cow position: chrX:37048544-37048684 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 41

Conread position: 571-693
Cow position: chrX:12116082-12115955 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 571-710
Cow position: chrX:35848599-35848454 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 93

Conread position: 571-712
Cow position: chrX:41199141-41198999 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 78

Conread position: 571-715
Cow position: chrX:17908253-17908398 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 38

Conread position: 571-715
Cow position: chrX:30832817-30832959 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 571-718
Cow position: chrX:14003611-14003756 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 571-720
Cow position: chrX:36723054-36723208 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 572-714
Cow position: chrX:47756894-47757040 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 28

Conread position: 575-715
Cow position: chrX:29509407-29509556 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 575-720
Cow position: chrX:40648017-40647868 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 37

Conread position: 576-711
Cow position: chrX:38439511-38439370 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 120

Conread position: 578-715
Cow position: chrX:20752282-20752142 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 35

Conread position: 580-715
Cow position: chrX:35681361-35681226 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 15

Conread position: 583-715
Cow position: chrX:17498101-17497973 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 18

Conread position: 589-715
Cow position: chrX:35969072-35969199 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 25

Conread position: 589-717
Cow position: chrX:42461730-42461858 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 100

Conread position: 594-715
Cow position: chrX:35609998-35609876 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 600-715
Cow position: chrX:7336834-7336716 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 31

Conread position: 602-715
Cow position: chrX:14925001-14924887 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 0

Conread position: 608-719
Cow position: chrX:35284615-35284503 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.