Cow genome map
| Conread name: | Ss1.1-Mixc-0028p05.3 |
| Conread position: | 12-540 |
| Cow position: | chr10:21939226-21938695 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 40-579 |
| Cow position: | chr10:8996627-8996086 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 521 |
| Conread position: | 41-581 |
| Cow position: | chr10:9010522-9009980 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 335 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 81, 85 |
| Conread position: | 47-563 |
| Cow position: | chr10:8996788-8996271 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 258 |
| Conread position: | 50-583 |
| Cow position: | chr10:8996701-8996165 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 172 |
| Conread position: | 51-496 |
| Cow position: | chr10:8996448-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 169 |
| Conread position: | 52-364 |
| Cow position: | chr10:9010175-9009863 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 182 |
| Conread position: | 52-412 |
| Cow position: | chr10:9010259-9009899 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 248, 253 |
| Conread position: | 57-417 |
| Cow position: | chr10:9031231-9031591 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 64-579 |
| Cow position: | chr10:8996939-8996422 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 273 |
| Conread position: | 72-406 |
| Cow position: | chr10:9031330-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-532 |
| Cow position: | chr10:9010323-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 384, 0 |
| Conread position: | 72-540 |
| Cow position: | chr10:8996511-8996041 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 92-519 |
| Cow position: | chr10:9031182-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 128-556 |
| Cow position: | chr10:21939345-21938929 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 344, 121 |
| Conread position: | 141-531 |
| Cow position: | chr10:9010590-9010198 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 221, 217 |
Show alignments to all cow chromosomes.