Cow genome map
| Conread name: | Ss1.1-Mixc-0028p05.3 |
| Conread position: | 2-533 |
| Cow position: | chr13:39984245-39984781 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 287 |
| Conread position: | 15-518 |
| Cow position: | chr13:39930670-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 40-364 |
| Cow position: | chr13:56292148-56291823 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 46-562 |
| Cow position: | chr13:22124733-22125250 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 46-562 |
| Cow position: | chr13:24162459-24162976 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 147, 160 |
| Conread position: | 46-581 |
| Cow position: | chr13:56333688-56334234 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 47-557 |
| Cow position: | chr13:22124902-22125414 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 47-557 |
| Cow position: | chr13:24162628-24163140 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 48-532 |
| Cow position: | chr13:56333774-56334269 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 271, 336 |
| Conread position: | 52-440 |
| Cow position: | chr13:56333610-56333998 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 53-562 |
| Cow position: | chr13:39930627-39931137 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 56-570 |
| Cow position: | chr13:39984386-39984902 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 221 |
| Conread position: | 66-563 |
| Cow position: | chr13:39983893-39984390 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 72-530 |
| Cow position: | chr13:39984234-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 365, 372 |
| Conread position: | 72-579 |
| Cow position: | chr13:39984150-39984659 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 412, 456 |
| Conread position: | 72-581 |
| Cow position: | chr13:39983982-39984493 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 487 |
| Conread position: | 76-542 |
| Cow position: | chr13:39984070-39984538 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 154 |
| Conread position: | 88-481 |
| Cow position: | chr13:56292181-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 94-581 |
| Cow position: | chr13:39930584-39931073 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 366 |
| Conread position: | 168-584 |
| Cow position: | chr13:22124687-22125107 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 319, 0 |
| Conread position: | 168-584 |
| Cow position: | chr13:24162413-24162833 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 319, 0 |
| Conread position: | 254-581 |
| Cow position: | chr13:39930576-39930905 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 216, 206 |
Show alignments to all cow chromosomes.