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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0028p05.3
        

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:51873712-51874011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:51969687-51970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:51874236-51874654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50083798-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 360
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:51752241-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr18:43168056-43168555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:43093406-43092880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:51789631-51789103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 380
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:52427981-52428507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:51368254-51367728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:42790976-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:33064506-33063971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:51969035-51969557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 189
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:40324536-40323992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:42791900-42792451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr18:51789713-51789130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 355
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:40324620-40324035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:52447120-52447705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 205
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:53636032-53635447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:56316061-56316646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr18:51368422-51367834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 355
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr18:51789461-51788873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 531
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr18:51839549-51838961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 444
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr18:52447372-52447960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 360
               

               
Conread position:
               
2-536
               

               
Cow position:
               
chr18:51969436-51969966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr18:51839297-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-536
               

               
Cow position:
               
chr18:43093322-43092783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
3-583
               

               
Cow position:
               
chr18:51765984-51765398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 286
               

               
Conread position:
               
4-522
               

               
Cow position:
               
chr18:33064839-33064316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 384
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr18:51969606-51970012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 190
               

               
Conread position:
               
8-401
               

               
Cow position:
               
chr18:44397918-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 219
               

               
Conread position:
               
8-500
               

               
Cow position:
               
chr18:1418103-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
8-578
               

               
Cow position:
               
chr18:41197592-41198171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 350
               

               
Conread position:
               
8-579
               

               
Cow position:
               
chr18:41197844-41198422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 463
               

               
Conread position:
               
8-579
               

               
Cow position:
               
chr18:42675220-42674642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 219
               

               
Conread position:
               
10-556
               

               
Cow position:
               
chr18:56329997-56329447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
12-581
               

               
Cow position:
               
chr18:50848440-50849016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
13-586
               

               
Cow position:
               
chr18:54967141-54967719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr18:50246523-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
15-424
               

               
Cow position:
               
chr18:41198355-41198769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
6, 343
               

               
Conread position:
               
15-425
               

               
Cow position:
               
chr18:51839199-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr18:56329237-56328824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr18:50048777-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
15-480
               

               
Cow position:
               
chr18:51765384-51764916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 210
               

               
Conread position:
               
15-496
               

               
Cow position:
               
chr18:33064072-33063588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 324
               

               
Conread position:
               
15-522
               

               
Cow position:
               
chr18:51400306-51400818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
15-535
               

               
Cow position:
               
chr18:51752057-51751530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
43, 241
               

               
Conread position:
               
15-536
               

               
Cow position:
               
chr18:51969133-51969639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
15-540
               

               
Cow position:
               
chr18:51400390-51400920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 364
               

               
Conread position:
               
15-546
               

               
Cow position:
               
chr18:51874168-51874702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
15-548
               

               
Cow position:
               
chr18:51812438-51811900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
15-579
               

               
Cow position:
               
chr18:51789783-51789214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
15-579
               

               
Cow position:
               
chr18:51812944-51812373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
15-580
               

               
Cow position:
               
chr18:40075133-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 268
               

               
Conread position:
               
16-586
               

               
Cow position:
               
chr18:42791579-42792155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr18:51789024-51788756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
18-354
               

               
Cow position:
               
chr18:53560459-53560794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
18-419
               

               
Cow position:
               
chr18:53586382-53585978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
18-463
               

               
Cow position:
               
chr18:50083983-50084433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
18-466
               

               
Cow position:
               
chr18:41948731-41948281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
18-498
               

               
Cow position:
               
chr18:50099844-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
18-505
               

               
Cow position:
               
chr18:44184437-44183945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 214
               

               
Conread position:
               
18-517
               

               
Cow position:
               
chr18:50059006-50058502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 453
               

               
Conread position:
               
18-522
               

               
Cow position:
               
chr18:41949067-41948558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 358
               

               
Conread position:
               
18-524
               

               
Cow position:
               
chr18:54967064-54967575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
18-528
               

               
Cow position:
               
chr18:51766053-51765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
18-531
               

               
Cow position:
               
chr18:43022706-43022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
18-531
               

               
Cow position:
               
chr18:43093965-43093459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
18-536
               

               
Cow position:
               
chr18:53559871-53560395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
18-538
               

               
Cow position:
               
chr18:52012162-52011637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
18-538
               

               
Cow position:
               
chr18:53509519-53510043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
18-542
               

               
Cow position:
               
chr18:33064237-33063708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 343
               

               
Conread position:
               
18-548
               

               
Cow position:
               
chr18:43167905-43168440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
18-567
               

               
Cow position:
               
chr18:56316330-56316884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 451
               

               
Conread position:
               
18-580
               

               
Cow position:
               
chr18:53509435-53510000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
18-581
               

               
Cow position:
               
chr18:50295217-50295785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
18-582
               

               
Cow position:
               
chr18:53525889-53526456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
18-583
               

               
Cow position:
               
chr18:50059594-50059023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 290
               

               
Conread position:
               
18-583
               

               
Cow position:
               
chr18:50848868-50849439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 546
               

               
Conread position:
               
18-583
               

               
Cow position:
               
chr18:51812603-51812032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
18-583
               

               
Cow position:
               
chr18:55066913-55066343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
18-589
               

               
Cow position:
               
chr18:56128570-56129144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
20-522
               

               
Cow position:
               
chr18:50099089-50099597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr18:42827604-42827918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
22-587
               

               
Cow position:
               
chr18:42792172-42792744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 276
               

               
Conread position:
               
23-446
               

               
Cow position:
               
chr18:53498509-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
23-530
               

               
Cow position:
               
chr18:50083315-50083828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 319
               

               
Conread position:
               
23-531
               

               
Cow position:
               
chr18:1418035-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
23-538
               

               
Cow position:
               
chr18:50271494-50272016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
23-540
               

               
Cow position:
               
chr18:55017997-55018520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
23-549
               

               
Cow position:
               
chr18:42791081-42791613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
23-562
               

               
Cow position:
               
chr18:42693678-42693136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 341
               

               
Conread position:
               
23-563
               

               
Cow position:
               
chr18:56493790-56494338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
23-579
               

               
Cow position:
               
chr18:43093718-43093159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
23-581
               

               
Cow position:
               
chr18:44398238-44397674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 208
               

               
Conread position:
               
23-581
               

               
Cow position:
               
chr18:49032761-49032197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 197
               

               
Conread position:
               
25-530
               

               
Cow position:
               
chr18:42791839-42792350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
26-586
               

               
Cow position:
               
chr18:50848707-50849274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
28-540
               

               
Cow position:
               
chr18:53586540-53586023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 112
               

               
Conread position:
               
29-356
               

               
Cow position:
               
chr18:54993619-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
29-371
               

               
Cow position:
               
chr18:54980275-54980616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
33-497
               

               
Cow position:
               
chr18:42792437-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
35-418
               

               
Cow position:
               
chr18:14453718-14453335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
265, 16
               

               
Conread position:
               
36-533
               

               
Cow position:
               
chr18:54966917-54967416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
36-534
               

               
Cow position:
               
chr18:55523694-55524194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 152
               

               
Conread position:
               
36-581
               

               
Cow position:
               
chr18:49022279-49022823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
37-531
               

               
Cow position:
               
chr18:53559974-53560473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr18:53635235-53634835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
177, 181
               

               
Conread position:
               
39-540
               

               
Cow position:
               
chr18:41197544-41198047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 400
               

               
Conread position:
               
41-506
               

               
Cow position:
               
chr18:42693405-42692938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
41-532
               

               
Cow position:
               
chr18:51789250-51788757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
320, 312
               

               
Conread position:
               
41-536
               

               
Cow position:
               
chr18:51839338-51838841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 431
               

               
Conread position:
               
41-581
               

               
Cow position:
               
chr18:49033075-49032533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
41-581
               

               
Cow position:
               
chr18:53586863-53586318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
42-528
               

               
Cow position:
               
chr18:50251058-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 78
               

               
Conread position:
               
42-580
               

               
Cow position:
               
chr18:42693992-42693452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
447, 519
               

               
Conread position:
               
42-581
               

               
Cow position:
               
chr18:42693908-42693367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
439, 523
               

               
Conread position:
               
42-581
               

               
Cow position:
               
chr18:43093530-43092989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 425
               

               
Conread position:
               
42-581
               

               
Cow position:
               
chr18:52012303-52011762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
42-581
               

               
Cow position:
               
chr18:53610411-53609870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
43-536
               

               
Cow position:
               
chr18:51812830-51812332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 336
               

               
Conread position:
               
44-586
               

               
Cow position:
               
chr18:55017770-55018315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
241, 253
               

               
Conread position:
               
45-415
               

               
Cow position:
               
chr18:50048660-50048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 128
               

               
Conread position:
               
45-416
               

               
Cow position:
               
chr18:50022176-50021802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 165
               

               
Conread position:
               
45-485
               

               
Cow position:
               
chr18:50295415-50295855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
335, 331
               

               
Conread position:
               
45-503
               

               
Cow position:
               
chr18:50295499-50295953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
298, 304
               

               
Conread position:
               
45-530
               

               
Cow position:
               
chr18:50245716-50246203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
45-586
               

               
Cow position:
               
chr18:49033407-49032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
46-335
               

               
Cow position:
               
chr18:52428702-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
46-522
               

               
Cow position:
               
chr18:52428282-52428759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
46-522
               

               
Cow position:
               
chr18:55008454-55008929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
239, 5
               

               
Conread position:
               
46-533
               

               
Cow position:
               
chr18:42985331-42984843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
46-536
               

               
Cow position:
               
chr18:53525753-53526244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
46-537
               

               
Cow position:
               
chr18:53509299-53509791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
46-540
               

               
Cow position:
               
chr18:42744488-42743993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
46-563
               

               
Cow position:
               
chr18:56329370-56328853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 5
               

               
Conread position:
               
46-564
               

               
Cow position:
               
chr18:50083510-50084029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr18:53635395-53635026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
362, 0
               

               
Conread position:
               
47-519
               

               
Cow position:
               
chr18:54993134-54993607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
47-529
               

               
Cow position:
               
chr18:50099288-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
47-529
               

               
Cow position:
               
chr18:50099792-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 162
               

               
Conread position:
               
47-530
               

               
Cow position:
               
chr18:33064625-33064140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 325
               

               
Conread position:
               
47-533
               

               
Cow position:
               
chr18:33092877-33092395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
163, 175
               

               
Conread position:
               
47-548
               

               
Cow position:
               
chr18:43167769-43168272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 306
               

               
Conread position:
               
47-581
               

               
Cow position:
               
chr18:42791193-42791729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
240, 250
               

               
Conread position:
               
48-539
               

               
Cow position:
               
chr18:43175294-43174801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
48-581
               

               
Cow position:
               
chr18:42724526-42723991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
331, 344
               

               
Conread position:
               
49-341
               

               
Cow position:
               
chr18:1418317-1418609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-410
               

               
Cow position:
               
chr18:50246476-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
233, 241
               

               
Conread position:
               
49-498
               

               
Cow position:
               
chr18:50271692-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
49-508
               

               
Cow position:
               
chr18:43174957-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
156, 173
               

               
Conread position:
               
49-519
               

               
Cow position:
               
chr18:42791363-42791835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
413, 420
               

               
Conread position:
               
49-522
               

               
Cow position:
               
chr18:42985077-42984602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
160, 173
               

               
Conread position:
               
49-524
               

               
Cow position:
               
chr18:56434444-56434921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
49-531
               

               
Cow position:
               
chr18:44184487-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
238, 226
               

               
Conread position:
               
49-581
               

               
Cow position:
               
chr18:42791699-42792233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
434, 0
               

               
Conread position:
               
49-583
               

               
Cow position:
               
chr18:50059224-50058688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr18:33063866-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
250, 254
               

               
Conread position:
               
50-449
               

               
Cow position:
               
chr18:49021550-49021946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
50-487
               

               
Cow position:
               
chr18:50281906-50282343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
219, 231
               

               
Conread position:
               
50-531
               

               
Cow position:
               
chr18:42674921-42674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 149
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr18:50848651-50849158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 168
               

               
Conread position:
               
50-578
               

               
Cow position:
               
chr18:50246141-50246673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 71
               

               
Conread position:
               
51-342
               

               
Cow position:
               
chr18:55524045-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
51-416
               

               
Cow position:
               
chr18:14453955-14453590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
249, 254
               

               
Conread position:
               
51-417
               

               
Cow position:
               
chr18:40324315-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
51-441
               

               
Cow position:
               
chr18:49022879-49023270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
310, 305
               

               
Conread position:
               
51-451
               

               
Cow position:
               
chr18:42744232-42743832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 73
               

               
Conread position:
               
51-503
               

               
Cow position:
               
chr18:53586430-53585976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
412, 0
               

               
Conread position:
               
51-508
               

               
Cow position:
               
chr18:14453787-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
306, 310
               

               
Conread position:
               
51-521
               

               
Cow position:
               
chr18:51789828-51789356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 421
               

               
Conread position:
               
51-522
               

               
Cow position:
               
chr18:50059390-50058917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
51-522
               

               
Cow position:
               
chr18:55523373-55523846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
152, 169
               

               
Conread position:
               
51-528
               

               
Cow position:
               
chr18:40086199-40085728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
51-529
               

               
Cow position:
               
chr18:43093605-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 302
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr18:40306654-40307135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
385, 402
               

               
Conread position:
               
51-531
               

               
Cow position:
               
chr18:42675256-42674774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
51-531
               

               
Cow position:
               
chr18:42724607-42724125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
206, 201
               

               
Conread position:
               
51-532
               

               
Cow position:
               
chr18:14453871-14453388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
173, 154
               

               
Conread position:
               
51-540
               

               
Cow position:
               
chr18:33064285-33063792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
51-541
               

               
Cow position:
               
chr18:40306402-40306894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 169
               

               
Conread position:
               
51-545
               

               
Cow position:
               
chr18:50048906-50048408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
146, 152
               

               
Conread position:
               
51-562
               

               
Cow position:
               
chr18:49033233-49032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 510
               

               
Conread position:
               
51-567
               

               
Cow position:
               
chr18:40306822-40307340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
433, 0
               

               
Conread position:
               
51-567
               

               
Cow position:
               
chr18:49032897-49032379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 254
               

               
Conread position:
               
51-578
               

               
Cow position:
               
chr18:49022711-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 401
               

               
Conread position:
               
51-578
               

               
Cow position:
               
chr18:55523541-55524070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
51-579
               

               
Cow position:
               
chr18:50098956-50099486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
143, 134
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:33064705-33064173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:40324819-40324287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 210
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:49032813-49032281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:52012378-52011846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:53559823-53560355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:53586934-53586402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
149, 169
               

               
Conread position:
               
51-581
               

               
Cow position:
               
chr18:55523625-55524157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 224
               

               
Conread position:
               
51-583
               

               
Cow position:
               
chr18:51368622-51368086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
51-587
               

               
Cow position:
               
chr18:55067045-55066506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
52-362
               

               
Cow position:
               
chr18:42959738-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
157, 170
               

               
Conread position:
               
52-362
               

               
Cow position:
               
chr18:52448098-52448409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
164, 170
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr18:43048662-43048348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-371
               

               
Cow position:
               
chr18:42724270-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
205, 201
               

               
Conread position:
               
52-375
               

               
Cow position:
               
chr18:56248175-56247855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr18:51400850-51401210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
52-417
               

               
Cow position:
               
chr18:52448014-52448380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
248, 252
               

               
Conread position:
               
52-441
               

               
Cow position:
               
chr18:42959813-42959433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
52-450
               

               
Cow position:
               
chr18:51789155-51788757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-451
               

               
Cow position:
               
chr18:43119921-43119522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr18:42837534-42837124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-492
               

               
Cow position:
               
chr18:54968104-54968546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
52-502
               

               
Cow position:
               
chr18:50250984-50251431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 69
               

               
Conread position:
               
52-508
               

               
Cow position:
               
chr18:55523878-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
146, 175
               

               
Conread position:
               
52-517
               

               
Cow position:
               
chr18:44240327-44240794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
248, 252
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:40324899-40324430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 20
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:49032644-49032172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:50030919-50030442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 419
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:50059053-50058581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
434, 0
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:50083768-50084240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:50099629-50100101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:50271611-50272083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 0
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:55018282-55018755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 168
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:56434195-56434667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
319, 306
               

               
Conread position:
               
52-523
               

               
Cow position:
               
chr18:40086532-40086061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
52-523
               

               
Cow position:
               
chr18:42985494-42985021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
158, 152
               

               
Conread position:
               
52-523
               

               
Cow position:
               
chr18:50059641-50059168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 391
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr18:42959981-42959512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
410, 226
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr18:43022921-43022444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
157, 170
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr18:44154301-44153830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 170
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr18:44239991-44240469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
235, 223
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr18:44253657-44253192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
247, 252
               

               
Conread position:
               
52-529
               

               
Cow position:
               
chr18:50022337-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
267, 325
               

               
Conread position:
               
52-529
               

               
Cow position:
               
chr18:50246311-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
52-530
               

               
Cow position:
               
chr18:33093040-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 231
               

               
Conread position:
               
52-530
               

               
Cow position:
               
chr18:50083432-50083912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
432, 0
               

               
Conread position:
               
52-530
               

               
Cow position:
               
chr18:50099209-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
52-530
               

               
Cow position:
               
chr18:54992802-54993282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
52-530
               

               
Cow position:
               
chr18:54993558-54994035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
52-531
               

               
Cow position:
               
chr18:40074921-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
397, 0
               

               
Conread position:
               
52-531
               

               
Cow position:
               
chr18:41949198-41948717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 321
               

               
Conread position:
               
52-531
               

               
Cow position:
               
chr18:43175038-43174557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 170
               

               
Conread position:
               
52-531
               

               
Cow position:
               
chr18:44239823-44240304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 121
               

               
Conread position:
               
52-532
               

               
Cow position:
               
chr18:43022837-43022355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
314, 320
               

               
Conread position:
               
52-532
               

               
Cow position:
               
chr18:43168026-43168508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 397
               

               
Conread position:
               
52-536
               

               
Cow position:
               
chr18:51874045-51874524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
52-537
               

               
Cow position:
               
chr18:41198229-41198716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 306
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr18:41949282-41948792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 232
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr18:54979710-54980200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr18:55008709-55009199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
52-552
               

               
Cow position:
               
chr18:50246059-50246562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
52-556
               

               
Cow position:
               
chr18:41948862-41948356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
52-562
               

               
Cow position:
               
chr18:42792374-42792885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
52-563
               

               
Cow position:
               
chr18:43120089-43119577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
52-563
               

               
Cow position:
               
chr18:43175206-43174694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
145, 155
               

               
Conread position:
               
52-576
               

               
Cow position:
               
chr18:50083684-50084210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 514
               

               
Conread position:
               
52-576
               

               
Cow position:
               
chr18:50246227-50246753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
52-576
               

               
Cow position:
               
chr18:56494078-56494596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 170
               

               
Conread position:
               
52-578
               

               
Cow position:
               
chr18:50848401-50848929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
52-578
               

               
Cow position:
               
chr18:53560160-53560688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
52-579
               

               
Cow position:
               
chr18:50059305-50058776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
141, 162
               

               
Conread position:
               
52-579
               

               
Cow position:
               
chr18:51368452-51367923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
141, 152
               

               
Conread position:
               
52-579
               

               
Cow position:
               
chr18:51400514-51401043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
52-579
               

               
Cow position:
               
chr18:51752269-51751740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
52-579
               

               
Cow position:
               
chr18:52447762-52448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 252
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:42792038-42792569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:49033316-49032785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 514
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:50021998-50021464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:52447342-52447873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:54967938-54968467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:54979962-54980493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 150
               

               
Conread position:
               
52-581
               

               
Cow position:
               
chr18:56330205-56329674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 0
               

               
Conread position:
               
52-583
               

               
Cow position:
               
chr18:52447678-52448212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 397
               

               
Conread position:
               
52-586
               

               
Cow position:
               
chr18:42792122-42792659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 397
               

               
Conread position:
               
52-586
               

               
Cow position:
               
chr18:43120173-43119636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 170
               

               
Conread position:
               
52-586
               

               
Cow position:
               
chr18:55008793-55009329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
145, 170
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr18:51873686-51874004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
53-536
               

               
Cow position:
               
chr18:51752349-51751867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
53-536
               

               
Cow position:
               
chr18:51766096-51765614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
55-528
               

               
Cow position:
               
chr18:43023086-43022611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
381, 394
               

               
Conread position:
               
55-576
               

               
Cow position:
               
chr18:56247660-56247145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 144
               

               
Conread position:
               
55-581
               

               
Cow position:
               
chr18:42675336-42674808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
56-532
               

               
Cow position:
               
chr18:56247575-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
57-530
               

               
Cow position:
               
chr18:50848322-50848797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
60-535
               

               
Cow position:
               
chr18:51969331-51969806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
403, 278
               

               
Conread position:
               
61-374
               

               
Cow position:
               
chr18:53610056-53609743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
208, 216
               

               
Conread position:
               
64-363
               

               
Cow position:
               
chr18:53497966-53498262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
64-501
               

               
Cow position:
               
chr18:14453294-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 69
               

               
Conread position:
               
64-522
               

               
Cow position:
               
chr18:41198073-41198533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 0
               

               
Conread position:
               
64-532
               

               
Cow position:
               
chr18:40086352-40085892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
232, 136
               

               
Conread position:
               
64-548
               

               
Cow position:
               
chr18:42744303-42743817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 241
               

               
Conread position:
               
64-579
               

               
Cow position:
               
chr18:50083276-50083793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 156
               

               
Conread position:
               
64-580
               

               
Cow position:
               
chr18:50099557-50100075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
133, 140
               

               
Conread position:
               
64-586
               

               
Cow position:
               
chr18:42744555-42744030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 294
               

               
Conread position:
               
65-579
               

               
Cow position:
               
chr18:44184891-44184375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
240, 220
               

               
Conread position:
               
66-581
               

               
Cow position:
               
chr18:42724844-42724327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 116
               

               
Conread position:
               
67-579
               

               
Cow position:
               
chr18:40306167-40306680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
295, 7
               

               
Conread position:
               
68-581
               

               
Cow position:
               
chr18:53636130-53635615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
420, 0
               

               
Conread position:
               
68-581
               

               
Cow position:
               
chr18:56128035-56128550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
141, 152
               

               
Conread position:
               
69-447
               

               
Cow position:
               
chr18:50049140-50048762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
69-538
               

               
Cow position:
               
chr18:50281757-50282229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
69-579
               

               
Cow position:
               
chr18:50245992-50246504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
69-581
               

               
Cow position:
               
chr18:50022491-50021971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
69-581
               

               
Cow position:
               
chr18:56329516-56329002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
70-419
               

               
Cow position:
               
chr18:44154030-44153689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
70-532
               

               
Cow position:
               
chr18:55017880-55018344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
127, 152
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr18:51765156-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-327
               

               
Cow position:
               
chr18:42837344-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
72-338
               

               
Cow position:
               
chr18:51400954-51401220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
197, 209
               

               
Conread position:
               
72-354
               

               
Cow position:
               
chr18:55018554-55018838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
72-355
               

               
Cow position:
               
chr18:53609961-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
228, 232
               

               
Conread position:
               
72-391
               

               
Cow position:
               
chr18:44240515-44240834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 148
               

               
Conread position:
               
72-404
               

               
Cow position:
               
chr18:42744127-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
72-410
               

               
Cow position:
               
chr18:53560432-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
72-439
               

               
Cow position:
               
chr18:53509240-53509607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
72-476
               

               
Cow position:
               
chr18:51367593-51367188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
396, 0
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:44397933-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
72-522
               

               
Cow position:
               
chr18:52427551-52428003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 170
               

               
Conread position:
               
72-522
               

               
Cow position:
               
chr18:52432900-52433352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
183, 170
               

               
Conread position:
               
72-522
               

               
Cow position:
               
chr18:54979814-54980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
72-522
               

               
Cow position:
               
chr18:55018218-55018670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
410, 0
               

               
Conread position:
               
72-528
               

               
Cow position:
               
chr18:40306507-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 134
               

               
Conread position:
               
72-528
               

               
Cow position:
               
chr18:51765743-51765286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
269, 7
               

               
Conread position:
               
72-529
               

               
Cow position:
               
chr18:50099733-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr18:53498139-53498602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr18:54980234-54980693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr18:42985222-42984761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
224, 203
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr18:43175352-43174893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 9
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr18:44398269-44397808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr18:53525694-53526155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
72-532
               

               
Cow position:
               
chr18:44239759-44240222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
210, 216
               

               
Conread position:
               
72-536
               

               
Cow position:
               
chr18:54992906-54993372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
227, 232
               

               
Conread position:
               
72-540
               

               
Cow position:
               
chr18:51367761-51367291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
72-540
               

               
Cow position:
               
chr18:51838784-51838319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
185, 178
               

               
Conread position:
               
72-540
               

               
Cow position:
               
chr18:54967790-54968258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
132, 148
               

               
Conread position:
               
72-540
               

               
Cow position:
               
chr18:54993326-54993796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
317, 281
               

               
Conread position:
               
72-544
               

               
Cow position:
               
chr18:54968040-54968515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
72-546
               

               
Cow position:
               
chr18:1418004-1418480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 166
               

               
Conread position:
               
72-546
               

               
Cow position:
               
chr18:40324630-40324154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
72-550
               

               
Cow position:
               
chr18:40306759-40307238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
408, 475
               

               
Conread position:
               
72-565
               

               
Cow position:
               
chr18:53560096-53560592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
72-565
               

               
Cow position:
               
chr18:54979478-54979974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
72-568
               

               
Cow position:
               
chr18:43093992-43093506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
72-578
               

               
Cow position:
               
chr18:51400702-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 394
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:41197829-41198338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 147
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:42674983-42674474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:42744715-42744206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 233
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:43094075-43093579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:44398353-44397844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 148
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:51789471-51788962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 397
               

               
Conread position:
               
72-579
               

               
Cow position:
               
chr18:56247727-56247226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 155
               

               
Conread position:
               
72-581
               

               
Cow position:
               
chr18:33064516-33064005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 224
               

               
Conread position:
               
72-581
               

               
Cow position:
               
chr18:53635790-53635279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 158
               

               
Conread position:
               
72-581
               

               
Cow position:
               
chr18:54992738-54993249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
72-583
               

               
Cow position:
               
chr18:51812630-51812116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 216
               

               
Conread position:
               
72-583
               

               
Cow position:
               
chr18:52447614-52448128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 286
               

               
Conread position:
               
72-586
               

               
Cow position:
               
chr18:55008645-55009162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
73-357
               

               
Cow position:
               
chr18:44153945-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
73-357
               

               
Cow position:
               
chr18:53526199-53526482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
282, 236
               

               
Conread position:
               
73-496
               

               
Cow position:
               
chr18:43048725-43048302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
202, 215
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr18:42827491-42827925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
414, 0
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr18:56329260-56328822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 0
               

               
Conread position:
               
73-518
               

               
Cow position:
               
chr18:44154112-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
137, 131
               

               
Conread position:
               
73-522
               

               
Cow position:
               
chr18:33065019-33064568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
73-522
               

               
Cow position:
               
chr18:43175101-43174650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 232
               

               
Conread position:
               
73-522
               

               
Cow position:
               
chr18:44253804-44253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
290, 285
               

               
Conread position:
               
73-523
               

               
Cow position:
               
chr18:40086601-40086145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
73-523
               

               
Cow position:
               
chr18:52012020-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
73-523
               

               
Cow position:
               
chr18:53635453-53635002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
387, 420
               

               
Conread position:
               
73-531
               

               
Cow position:
               
chr18:40324377-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
225, 232
               

               
Conread position:
               
73-531
               

               
Cow position:
               
chr18:43175437-43174977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 100
               

               
Conread position:
               
73-531
               

               
Cow position:
               
chr18:44240096-44240556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 130
               

               
Conread position:
               
73-532
               

               
Cow position:
               
chr18:44154451-44153987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
73-532
               

               
Cow position:
               
chr18:44184631-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
73-533
               

               
Cow position:
               
chr18:42837849-42837387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 149
               

               
Conread position:
               
73-537
               

               
Cow position:
               
chr18:44154364-44153899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
389, 382
               

               
Conread position:
               
73-540
               

               
Cow position:
               
chr18:42744378-42743909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 0
               

               
Conread position:
               
73-540
               

               
Cow position:
               
chr18:42837681-42837212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
73-548
               

               
Cow position:
               
chr18:42837597-42837120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
73-579
               

               
Cow position:
               
chr18:43022564-43022056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 204
               

               
Conread position:
               
73-579
               

               
Cow position:
               
chr18:44240264-44240772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
304, 293
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr18:33064095-33063586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr18:52447111-52447620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
143, 153
               

               
Conread position:
               
73-581
               

               
Cow position:
               
chr18:33064935-33064425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 0
               

               
Conread position:
               
73-581
               

               
Cow position:
               
chr18:56128460-56128970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 155
               

               
Conread position:
               
73-581
               

               
Cow position:
               
chr18:56329680-56329170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 0
               

               
Conread position:
               
73-581
               

               
Cow position:
               
chr18:56329764-56329254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 0
               

               
Conread position:
               
73-581
               

               
Cow position:
               
chr18:56330016-56329506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 222
               

               
Conread position:
               
73-587
               

               
Cow position:
               
chr18:50848170-50848687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
73-589
               

               
Cow position:
               
chr18:53610212-53609696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 114
               

               
Conread position:
               
74-523
               

               
Cow position:
               
chr18:53586995-53586544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
74-532
               

               
Cow position:
               
chr18:56493760-56494224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 244
               

               
Conread position:
               
74-536
               

               
Cow position:
               
chr18:51839557-51839093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
302, 315
               

               
Conread position:
               
75-570
               

               
Cow position:
               
chr18:42960125-42959638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
75-586
               

               
Cow position:
               
chr18:42837930-42837417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
218, 7
               

               
Conread position:
               
76-440
               

               
Cow position:
               
chr18:44253310-44252947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
223, 195
               

               
Conread position:
               
76-522
               

               
Cow position:
               
chr18:40306259-40306707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
397, 384
               

               
Conread position:
               
76-522
               

               
Cow position:
               
chr18:43120317-43119869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 129
               

               
Conread position:
               
76-523
               

               
Cow position:
               
chr18:52446864-52447311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
76-533
               

               
Cow position:
               
chr18:43119981-43119522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 141
               

               
Conread position:
               
76-562
               

               
Cow position:
               
chr18:42694042-42693555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
117, 131
               

               
Conread position:
               
76-578
               

               
Cow position:
               
chr18:50031060-50030552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
211, 112
               

               
Conread position:
               
76-581
               

               
Cow position:
               
chr18:33093100-33092593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 366
               

               
Conread position:
               
76-581
               

               
Cow position:
               
chr18:52446946-52447453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
78-559
               

               
Cow position:
               
chr18:50098899-50099385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
79-401
               

               
Cow position:
               
chr18:42984795-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 143
               

               
Conread position:
               
79-417
               

               
Cow position:
               
chr18:52428650-52428988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
218, 225
               

               
Conread position:
               
79-417
               

               
Cow position:
               
chr18:52433831-52434169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
218, 225
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr18:22634817-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
79-493
               

               
Cow position:
               
chr18:40306934-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-519
               

               
Cow position:
               
chr18:41197500-41197942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 0
               

               
Conread position:
               
79-522
               

               
Cow position:
               
chr18:51368509-51368064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
114, 136
               

               
Conread position:
               
79-522
               

               
Cow position:
               
chr18:52427894-52428339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
79-522
               

               
Cow position:
               
chr18:52433243-52433688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
300, 294
               

               
Conread position:
               
79-522
               

               
Cow position:
               
chr18:52433495-52433940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
221, 225
               

               
Conread position:
               
79-548
               

               
Cow position:
               
chr18:53610542-53610071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
79-579
               

               
Cow position:
               
chr18:52428482-52428984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
79-579
               

               
Cow position:
               
chr18:52433663-52434165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
79-581
               

               
Cow position:
               
chr18:1417927-1418431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
79-581
               

               
Cow position:
               
chr18:56247806-56247308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 224
               

               
Conread position:
               
79-581
               

               
Cow position:
               
chr18:56493937-56494441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 296
               

               
Conread position:
               
79-582
               

               
Cow position:
               
chr18:56494021-56494524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 151
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr18:54967047-54967498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
281, 276
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr18:54979572-54980023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
117, 124
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr18:55008571-55009022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
109, 130
               

               
Conread position:
               
82-563
               

               
Cow position:
               
chr18:55067098-55066616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
82-578
               

               
Cow position:
               
chr18:43120395-43119895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
187, 207
               

               
Conread position:
               
82-581
               

               
Cow position:
               
chr18:56315977-56316478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
115, 121
               

               
Conread position:
               
82-583
               

               
Cow position:
               
chr18:51765482-51764978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
364, 360
               

               
Conread position:
               
83-503
               

               
Cow position:
               
chr18:56248225-56247814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
405, 32
               

               
Conread position:
               
83-568
               

               
Cow position:
               
chr18:14454007-14453520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
133, 151
               

               
Conread position:
               
85-522
               

               
Cow position:
               
chr18:44398424-44397985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
85-540
               

               
Cow position:
               
chr18:43175593-43175136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 137
               

               
Conread position:
               
88-336
               

               
Cow position:
               
chr18:50849193-50849441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-583
               

               
Cow position:
               
chr18:42827422-42827920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
90-579
               

               
Cow position:
               
chr18:51400132-51400623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
92-522
               

               
Cow position:
               
chr18:49022668-49023100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
210, 203
               

               
Conread position:
               
93-522
               

               
Cow position:
               
chr18:54967646-54968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
94-580
               

               
Cow position:
               
chr18:40075131-40075619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
379, 372
               

               
Conread position:
               
94-581
               

               
Cow position:
               
chr18:55523332-55523821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
94-598
               

               
Cow position:
               
chr18:53635516-53635013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 471
               

               
Conread position:
               
97-587
               

               
Cow position:
               
chr18:40306616-40307109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
99-523
               

               
Cow position:
               
chr18:43167737-43168163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
101-548
               

               
Cow position:
               
chr18:51367649-51367198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
104-579
               

               
Cow position:
               
chr18:50059674-50059196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 255
               

               
Conread position:
               
105-531
               

               
Cow position:
               
chr18:44398569-44398144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
257, 60
               

               
Conread position:
               
118-363
               

               
Cow position:
               
chr18:50021676-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 10
               

               
Conread position:
               
126-516
               

               
Cow position:
               
chr18:56434102-56434493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
126-565
               

               
Cow position:
               
chr18:54979448-54979890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
240, 248
               

               
Conread position:
               
126-581
               

               
Cow position:
               
chr18:55497650-55497193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
262, 250
               

               
Conread position:
               
126-583
               

               
Cow position:
               
chr18:49022618-49023077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
126-586
               

               
Cow position:
               
chr18:54992708-54993171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 155
               

               
Conread position:
               
130-532
               

               
Cow position:
               
chr18:42960323-42959919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
130-579
               

               
Cow position:
               
chr18:50049251-50048796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 170
               

               
Conread position:
               
132-583
               

               
Cow position:
               
chr18:14454042-14453588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
135-532
               

               
Cow position:
               
chr18:44184905-44184506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
135-576
               

               
Cow position:
               
chr18:42790945-42791388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
136-491
               

               
Cow position:
               
chr18:56267478-56267123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
136-565
               

               
Cow position:
               
chr18:51874045-51874470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
327, 113
               

               
Conread position:
               
141-531
               

               
Cow position:
               
chr18:42985573-42985181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
141-579
               

               
Cow position:
               
chr18:52432885-52433325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
319, 328
               

               
Conread position:
               
141-583
               

               
Cow position:
               
chr18:52427536-52427980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
319, 328
               

               
Conread position:
               
141-586
               

               
Cow position:
               
chr18:44398452-44398004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
142-458
               

               
Cow position:
               
chr18:51873689-51874004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
304, 18
               

               
Conread position:
               
142-522
               

               
Cow position:
               
chr18:22634628-22635010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 148
               

               
Conread position:
               
142-522
               

               
Cow position:
               
chr18:33093118-33092736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
142-531
               

               
Cow position:
               
chr18:44239745-44240136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
308, 320
               

               
Conread position:
               
142-536
               

               
Cow position:
               
chr18:51766093-51765698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
294, 15
               

               
Conread position:
               
142-581
               

               
Cow position:
               
chr18:50281744-50282187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
144-540
               

               
Cow position:
               
chr18:42744727-42744329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
146-579
               

               
Cow position:
               
chr18:42827397-42827831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 6
               

               
Conread position:
               
148-557
               

               
Cow position:
               
chr18:42724594-42724183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
193, 188
               

               
Conread position:
               
148-581
               

               
Cow position:
               
chr18:55523302-55523737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
148-587
               

               
Cow position:
               
chr18:55067116-55066674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
150-583
               

               
Cow position:
               
chr18:50245989-50246425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
151-522
               

               
Cow position:
               
chr18:44253894-44253521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
151-523
               

               
Cow position:
               
chr18:41949351-41948977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
335, 0
               

               
Conread position:
               
152-582
               

               
Cow position:
               
chr18:14453290-14452858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 153
               

               
Conread position:
               
153-582
               

               
Cow position:
               
chr18:40324966-40324538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
154-581
               

               
Cow position:
               
chr18:51400280-51400709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
292, 283
               

               
Conread position:
               
156-585
               

               
Cow position:
               
chr18:50271463-50271892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 140
               

               
Conread position:
               
159-563
               

               
Cow position:
               
chr18:53587080-53586673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
169-563
               

               
Cow position:
               
chr18:43175593-43175198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
313, 392
               

               
Conread position:
               
222-533
               

               
Cow position:
               
chr18:53525675-53525989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
222-581
               

               
Cow position:
               
chr18:53509221-53509583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
232-541
               

               
Cow position:
               
chr18:56248165-56247855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
256, 0
               

               
Conread position:
               
233-530
               

               
Cow position:
               
chr18:50281670-50281968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
240-579
               

               
Cow position:
               
chr18:42837934-42837593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
247-579
               

               
Cow position:
               
chr18:41197500-41197834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
303-562
               

               
Cow position:
               
chr18:56330206-56329946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
309-581
               

               
Cow position:
               
chr18:43048741-43048467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
174, 257
               
Show alignments to all cow chromosomes.