Cow genome map
| Conread name: | Ss1.1-Mixc-0028p05.3 |
| Conread position: | 1-415 |
| Cow position: | chr2:78755930-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 184 |
| Conread position: | 4-579 |
| Cow position: | chr2:82799707-82800287 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 7-576 |
| Cow position: | chr2:5874916-5874340 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 360 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 205 |
| Conread position: | 10-590 |
| Cow position: | chr2:48689603-48689022 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 195 |
| Conread position: | 15-458 |
| Cow position: | chr2:82799970-82800416 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 17-582 |
| Cow position: | chr2:78755862-78756429 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 351 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 37, 252 |
| Conread position: | 18-320 |
| Cow position: | chr2:82800141-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 18-532 |
| Cow position: | chr2:78755195-78755710 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 142 |
| Conread position: | 18-581 |
| Cow position: | chr2:82799553-82800121 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 26-437 |
| Cow position: | chr2:5874559-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 260 |
| Conread position: | 42-581 |
| Cow position: | chr2:5875128-5874587 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 246, 254 |
| Conread position: | 46-581 |
| Cow position: | chr2:82799837-82800373 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 5 |
| Conread position: | 50-530 |
| Cow position: | chr2:78754240-78754719 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 126, 114 |
| Conread position: | 51-404 |
| Cow position: | chr2:82800093-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-552 |
| Cow position: | chr2:86465749-86466250 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 204, 185 |
| Conread position: | 51-581 |
| Cow position: | chr2:82799505-82800037 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 328 |
| Conread position: | 52-536 |
| Cow position: | chr2:78754896-78755381 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 238 |
| Conread position: | 52-581 |
| Cow position: | chr2:78754492-78755007 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 334 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 432, 198 |
| Conread position: | 69-578 |
| Cow position: | chr2:78754829-78755341 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 213 |
| Conread position: | 73-441 |
| Cow position: | chr2:86465519-86465887 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 79-576 |
| Cow position: | chr2:86465357-86465856 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 82-503 |
| Cow position: | chr2:78755596-78756017 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 202, 71 |
| Conread position: | 83-556 |
| Cow position: | chr2:82799453-82799928 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 218 |
| Conread position: | 83-582 |
| Cow position: | chr2:86465109-86465612 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 148, 157 |
| Conread position: | 86-522 |
| Cow position: | chr2:78754442-78754864 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 198, 204 |
| Conread position: | 93-588 |
| Cow position: | chr2:5875161-5874663 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 209, 202 |
| Conread position: | 126-532 |
| Cow position: | chr2:86465740-86466148 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 193, 201 |
| Conread position: | 126-581 |
| Cow position: | chr2:86465320-86465777 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 345, 328 |
| Conread position: | 135-579 |
| Cow position: | chr2:78754811-78755257 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 301, 323 |
| Conread position: | 158-519 |
| Cow position: | chr2:5875180-5874817 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 278, 318 |
| Conread position: | 349-584 |
| Cow position: | chr2:82799467-82799704 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 135, 212 |
Show alignments to all cow chromosomes.