Cow genome map
| Conread name: | Ss1.1-Mixc-0028p05.3 |
| Conread position: | 3-486 |
| Cow position: | chr24:17077998-17077512 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 383 |
| Conread position: | 15-415 |
| Cow position: | chr24:17077902-17077499 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 377 |
| Conread position: | 18-546 |
| Cow position: | chr24:17036601-17036071 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 21-579 |
| Cow position: | chr24:17036013-17035450 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 186 |
| Conread position: | 22-507 |
| Cow position: | chr24:17035508-17035018 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 22-579 |
| Cow position: | chr24:17035760-17035198 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 338 |
| Conread position: | 40-548 |
| Cow position: | chr24:17078042-17077532 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 426 |
| Conread position: | 49-580 |
| Cow position: | chr24:17078117-17077584 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 304 |
| Conread position: | 49-581 |
| Cow position: | chr24:17036318-17035784 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 128 |
| Conread position: | 50-579 |
| Cow position: | chr24:17035897-17035366 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 333 |
| Conread position: | 50-579 |
| Cow position: | chr24:17036485-17035954 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 0 |
| Conread position: | 51-267 |
| Cow position: | chr24:17013310-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 51-409 |
| Cow position: | chr24:17070689-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 338, 333 |
| Conread position: | 52-342 |
| Cow position: | chr24:17013227-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 52-563 |
| Cow position: | chr24:17070522-17071034 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 414 |
| Conread position: | 52-579 |
| Cow position: | chr24:17078282-17077753 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 306 |
| Conread position: | 55-581 |
| Cow position: | chr24:17078363-17077835 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 511 |
| Conread position: | 72-461 |
| Cow position: | chr24:17035371-17034982 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-517 |
| Cow position: | chr24:17036043-17035596 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 212 |
| Conread position: | 72-567 |
| Cow position: | chr24:17035539-17035042 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 311 |
| Conread position: | 73-506 |
| Cow position: | chr24:17070627-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 393 |
| Conread position: | 73-579 |
| Cow position: | chr24:17036126-17035618 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 493 |
| Conread position: | 74-303 |
| Cow position: | chr24:16986431-16986660 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-415 |
| Cow position: | chr24:17013174-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-581 |
| Cow position: | chr24:17070480-17070969 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 97-551 |
| Cow position: | chr24:17078153-17077697 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 0 |
| Conread position: | 141-497 |
| Cow position: | chr24:17013148-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 341, 0 |
| Conread position: | 223-581 |
| Cow position: | chr24:17070358-17070717 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 213, 5 |
| Conread position: | 225-540 |
| Cow position: | chr24:17013148-17013465 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 137, 133 |
| Conread position: | 239-458 |
| Cow position: | chr24:16986428-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 197, 210 |
Show alignments to all cow chromosomes.