Cow genome map


           Conread name:
           Ss1.1-Mixc-0028p05.3
        

               Conread position:
               3-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 383
               

               Conread position:
               15-415
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 377
               

               Conread position:
               18-546
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 186
               

               Conread position:
               22-507
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 338
               

               Conread position:
               40-548
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 426
               

               Conread position:
               49-580
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 304
               

               Conread position:
               49-581
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 128
               

               Conread position:
               50-579
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 333
               

               Conread position:
               50-579
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 0
               

               Conread position:
               51-267
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               51-409
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               338, 333
               

               Conread position:
               52-342
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               279, 0
               

               Conread position:
               52-563
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               421, 414
               

               Conread position:
               52-579
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               55-581
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               428, 511
               

               Conread position:
               72-461
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-517
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 212
               

               Conread position:
               72-567
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 311
               

               Conread position:
               73-506
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               400, 393
               

               Conread position:
               73-579
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               410, 493
               

               Conread position:
               74-303
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-415
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-581
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               97-551
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 0
               

               Conread position:
               141-497
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               341, 0
               

               Conread position:
               223-581
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               213, 5
               

               Conread position:
               225-540
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               137, 133
               

               Conread position:
               239-458
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               197, 210
               
Show alignments to all cow chromosomes.