Cow genome map

Conread name: Ss1.1-Mixc-0028p05.3

Conread position: 1-362
Cow position:
Alignm length: 366
Alignm identity: 223
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 264

Conread position: 1-499
Cow position:
Alignm length: 503
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 219

Conread position: 1-502
Cow position:
Alignm length: 508
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 1-536
Cow position:
Alignm length: 543
Alignm identity: 337
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 27

Conread position: 3-430
Cow position:
Alignm length: 432
Alignm identity: 267
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 19

Conread position: 15-521
Cow position:
Alignm length: 513
Alignm identity: 324
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 90

Conread position: 15-579
Cow position:
Alignm length: 574
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 18-486
Cow position:
Alignm length: 473
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 454

Conread position: 18-581
Cow position:
Alignm length: 571
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 201

Conread position: 18-583
Cow position:
Alignm length: 575
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 40-546
Cow position:
Alignm length: 511
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 43

Conread position: 45-581
Cow position:
Alignm length: 541
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 172

Conread position: 46-557
Cow position:
Alignm length: 515
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 88

Conread position: 46-589
Cow position:
Alignm length: 548
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 5

Conread position: 47-598
Cow position:
Alignm length: 555
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 520

Conread position: 48-403
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 20, 32

Conread position: 49-417
Cow position:
Alignm length: 370
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 238, 63

Conread position: 50-448
Cow position:
Alignm length: 401
Alignm identity: 252
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 219, 227

Conread position: 50-581
Cow position:
Alignm length: 536
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 52-418
Cow position:
Alignm length: 369
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 270, 334

Conread position: 52-426
Cow position:
Alignm length: 375
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 52-454
Cow position:
Alignm length: 406
Alignm identity: 264
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 140, 152

Conread position: 52-517
Cow position:
Alignm length: 470
Alignm identity: 293
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 410, 383

Conread position: 52-532
Cow position:
Alignm length: 486
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 55-344
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 55-552
Cow position:
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 118

Conread position: 56-518
Cow position:
Alignm length: 468
Alignm identity: 288
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 168

Conread position: 60-562
Cow position:
Alignm length: 505
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 501

Conread position: 69-345
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 133, 138

Conread position: 72-502
Cow position:
Alignm length: 435
Alignm identity: 246
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 138, 150

Conread position: 72-571
Cow position:
Alignm length: 505
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 9

Conread position: 73-313
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 73-458
Cow position:
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 0

Conread position: 75-415
Cow position:
Alignm length: 341
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 76-537
Cow position:
Alignm length: 469
Alignm identity: 296
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 50

Conread position: 76-581
Cow position:
Alignm length: 510
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 116

Conread position: 82-508
Cow position:
Alignm length: 429
Alignm identity: 265
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 384, 0

Conread position: 84-523
Cow position:
Alignm length: 448
Alignm identity: 275
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 41

Conread position: 85-558
Cow position:
Alignm length: 476
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 0

Conread position: 86-533
Cow position:
Alignm length: 454
Alignm identity: 294
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 49

Conread position: 92-581
Cow position:
Alignm length: 495
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 245

Conread position: 126-508
Cow position:
Alignm length: 387
Alignm identity: 248
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 242, 248

Conread position: 141-522
Cow position:
Alignm length: 388
Alignm identity: 242
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 218

Conread position: 141-563
Cow position:
Alignm length: 426
Alignm identity: 262
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 164, 158

Conread position: 141-581
Cow position:
Alignm length: 447
Alignm identity: 272
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 76

Conread position: 141-581
Cow position:
Alignm length: 446
Alignm identity: 282
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 112

Conread position: 153-497
Cow position:
Alignm length: 348
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 317, 303

Conread position: 153-581
Cow position:
Alignm length: 435
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 314

Conread position: 166-578
Cow position:
Alignm length: 419
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 111

Conread position: 239-508
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 58

Show alignments to all cow chromosomes.