Cow genome map

Conread name: Ss1.1-Mixc-0028p05.3

Conread position: 1-476
Cow position:
Alignm length: 480
Alignm identity: 296
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 455

Conread position: 8-583
Cow position:
Alignm length: 587
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 355

Conread position: 15-246
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 72

Conread position: 18-535
Cow position:
Alignm length: 526
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 112

Conread position: 19-394
Cow position:
Alignm length: 379
Alignm identity: 242
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 23-494
Cow position:
Alignm length: 476
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 49-530
Cow position:
Alignm length: 486
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 157

Conread position: 49-530
Cow position:
Alignm length: 488
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 169

Conread position: 49-531
Cow position:
Alignm length: 487
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 309

Conread position: 49-578
Cow position:
Alignm length: 535
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 157

Conread position: 49-581
Cow position:
Alignm length: 537
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 169

Conread position: 49-583
Cow position:
Alignm length: 539
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 288

Conread position: 50-579
Cow position:
Alignm length: 535
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 308

Conread position: 51-571
Cow position:
Alignm length: 525
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 52-305
Cow position:
Alignm length: 255
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 219, 235

Conread position: 52-328
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 273, 0

Conread position: 52-519
Cow position:
Alignm length: 470
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 0

Conread position: 52-528
Cow position:
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 97

Conread position: 52-535
Cow position:
Alignm length: 487
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 319

Conread position: 52-536
Cow position:
Alignm length: 488
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 49

Conread position: 52-558
Cow position:
Alignm length: 509
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 408, 0

Conread position: 52-567
Cow position:
Alignm length: 523
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 170

Conread position: 56-519
Cow position:
Alignm length: 469
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 56-536
Cow position:
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 0

Conread position: 63-579
Cow position:
Alignm length: 522
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 405

Conread position: 64-579
Cow position:
Alignm length: 520
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 294

Conread position: 69-568
Cow position:
Alignm length: 504
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 137

Conread position: 72-519
Cow position:
Alignm length: 450
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 0

Conread position: 72-529
Cow position:
Alignm length: 460
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 0

Conread position: 72-583
Cow position:
Alignm length: 520
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 73-407
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 73-528
Cow position:
Alignm length: 459
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 0

Conread position: 73-579
Cow position:
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 311

Conread position: 73-580
Cow position:
Alignm length: 513
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 149

Conread position: 74-579
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 99

Conread position: 84-579
Cow position:
Alignm length: 500
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 385

Conread position: 88-581
Cow position:
Alignm length: 499
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 93-530
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 269, 265

Conread position: 94-446
Cow position:
Alignm length: 353
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 257, 0

Conread position: 159-578
Cow position:
Alignm length: 426
Alignm identity: 271
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 75

Conread position: 225-535
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 236

Show alignments to all cow chromosomes.