Cow genome map


           Conread name:
           Ss1.1-Mixc-0029,d19.3
        

               Conread position:
               1-110
               

               Cow position:
               chr2:69963842-69963733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-220
               

               Cow position:
               chr2:69959957-69959848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-325
               

               Cow position:
               chr2:69954492-69954375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               114
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-481
               

               Cow position:
               chr2:69954086-69953928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               479-644
               

               Cow position:
               chr2:69952892-69952727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               643-812
               

               Cow position:
               chr2:69949428-69949259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               810-940
               

               Cow position:
               chr2:69948257-69948128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               922-1018
               

               Cow position:
               chr2:69946774-69946678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1017-1123
               

               Cow position:
               chr2:69946234-69946128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1121-1670
               

               Cow position:
               chr2:69945221-69944682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 207
               
Show alignments to all cow chromosomes.