Cow genome map
| Conread name: | Ss1.1-Mixc-0029d09.5 |
| Conread position: | 534-764 |
| Cow position: | chr15:62644-62884 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 101 |
| Conread position: | 534-764 |
| Cow position: | chr15:41029128-41028888 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 101 |
| Conread position: | 534-764 |
| Cow position: | chr15:45211203-45211443 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 101 |
| Conread position: | 536-764 |
| Cow position: | chr15:6158373-6158611 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 536-764 |
| Cow position: | chr15:7985234-7984996 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 94 |
| Conread position: | 536-764 |
| Cow position: | chr15:16800535-16800295 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 536-771 |
| Cow position: | chr15:5913401-5913155 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 546-764 |
| Cow position: | chr15:2008506-2008734 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 84 |
| Conread position: | 546-764 |
| Cow position: | chr15:41105841-41105613 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 89 |
| Conread position: | 557-744 |
| Cow position: | chr15:51943134-51943329 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 557-771 |
| Cow position: | chr15:34102647-34102428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 557-771 |
| Cow position: | chr15:34270741-34270519 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 172 |
| Conread position: | 557-773 |
| Cow position: | chr15:29728211-29727988 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 558-765 |
| Cow position: | chr15:21839851-21839633 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 558-769 |
| Cow position: | chr15:14322034-14322246 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 558-771 |
| Cow position: | chr15:11958305-11958081 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 173 |
| Conread position: | 558-773 |
| Cow position: | chr15:9368829-9369051 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 559-747 |
| Cow position: | chr15:30437814-30438007 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 559-748 |
| Cow position: | chr15:2663278-2663080 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-748 |
| Cow position: | chr15:10034457-10034259 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 559-748 |
| Cow position: | chr15:32714915-32715113 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 559-752 |
| Cow position: | chr15:2389314-2389115 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 559-764 |
| Cow position: | chr15:2590612-2590823 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:2820570-2820785 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:3005020-3004805 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:3793502-3793717 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:5213776-5213561 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:6617014-6617229 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-764 |
| Cow position: | chr15:7267817-7268027 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 559-764 |
| Cow position: | chr15:11596166-11595951 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:12859357-12859572 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:13431375-13431590 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:20944588-20944803 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:23666278-23666063 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:36329244-36329031 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 559-764 |
| Cow position: | chr15:37744269-37744484 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 559-764 |
| Cow position: | chr15:43756939-43756724 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:50086349-50086134 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:50142475-50142690 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr15:52159130-52158915 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr15:52208281-52208066 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-767 |
| Cow position: | chr15:50308256-50308038 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-771 |
| Cow position: | chr15:50151915-50152138 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 559-771 |
| Cow position: | chr15:50947824-50947608 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 124 |
| Conread position: | 559-776 |
| Cow position: | chr15:8937620-8937838 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 165 |
| Conread position: | 559-778 |
| Cow position: | chr15:25463312-25463080 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-786 |
| Cow position: | chr15:3837492-3837733 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-787 |
| Cow position: | chr15:9620184-9619942 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 131 |
| Conread position: | 561-764 |
| Cow position: | chr15:6013770-6013566 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 128 |
| Conread position: | 566-771 |
| Cow position: | chr15:13545859-13545654 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 95 |
| Conread position: | 583-771 |
| Cow position: | chr15:40821496-40821687 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 52 |
Show alignments to all cow chromosomes.