Cow genome map

Conread name: Ss1.1-Mixc-0029d09.5

Conread position: 520-792
Cow position: chr23:16238062-16237781 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 19

Conread position: 534-751
Cow position: chr23:10164824-10164611 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 7

Conread position: 534-764
Cow position: chr23:31584827-31585067 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 101

Conread position: 546-764
Cow position: chr23:35284983-35284755 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 89

Conread position: 546-771
Cow position: chr23:6698370-6698612 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 546-777
Cow position: chr23:19056824-19056581 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 82

Conread position: 557-746
Cow position: chr23:30716725-30716531 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 39

Conread position: 557-771
Cow position: chr23:7265868-7265653 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 125

Conread position: 557-771
Cow position: chr23:10955812-10956043 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 102

Conread position: 557-771
Cow position: chr23:20862003-20862222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 129

Conread position: 558-748
Cow position: chr23:1952088-1952279 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 59

Conread position: 558-757
Cow position: chr23:25357892-25358090 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 82

Conread position: 558-764
Cow position: chr23:1337941-1337737 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 129

Conread position: 558-771
Cow position: chr23:11209334-11209557 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 77

Conread position: 558-771
Cow position: chr23:26305718-26305938 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 133

Conread position: 558-774
Cow position: chr23:13511074-13511301 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 558-779
Cow position: chr23:27899691-27899922 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 157

Conread position: 558-802
Cow position: chr23:2032941-2033201 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 559-748
Cow position: chr23:7494176-7494362 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 69, 75

Conread position: 559-748
Cow position: chr23:14215684-14215486 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 76

Conread position: 559-748
Cow position: chr23:28084705-28084903 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 71

Conread position: 559-748
Cow position: chr23:35683383-35683185 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 76

Conread position: 559-763
Cow position: chr23:27314293-27314508 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 559-764
Cow position: chr23:954250-954035 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 75

Conread position: 559-764
Cow position: chr23:977499-977285 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:2723296-2723511 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:3549645-3549430 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:4100428-4100643 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 131

Conread position: 559-764
Cow position: chr23:4266986-4267201 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 75

Conread position: 559-764
Cow position: chr23:4532152-4531937 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 559-764
Cow position: chr23:9267312-9267098 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 75

Conread position: 559-764
Cow position: chr23:10874112-10873897 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 71

Conread position: 559-764
Cow position: chr23:10936747-10936532 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 71

Conread position: 559-764
Cow position: chr23:11079935-11080150 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 75

Conread position: 559-764
Cow position: chr23:19316661-19316446 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 559-764
Cow position: chr23:19948472-19948258 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 69

Conread position: 559-764
Cow position: chr23:21009236-21009451 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:29043334-29043549 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 131

Conread position: 559-764
Cow position: chr23:39745410-39745625 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:39784307-39784522 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 75

Conread position: 559-764
Cow position: chr23:40710471-40710686 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 76

Conread position: 559-764
Cow position: chr23:41015479-41015694 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 76

Conread position: 559-766
Cow position: chr23:25351910-25352128 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 75

Conread position: 559-771
Cow position: chr23:31607951-31607730 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 93

Conread position: 559-779
Cow position: chr23:3488643-3488410 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 168

Conread position: 560-764
Cow position: chr23:671721-671935 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 74

Conread position: 560-780
Cow position: chr23:15865800-15865570 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 169

Conread position: 561-764
Cow position: chr23:25192862-25192649 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 73

Conread position: 562-767
Cow position: chr23:29346922-29346707 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 566-748
Cow position: chr23:573710-573519 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 68

Conread position: 566-766
Cow position: chr23:17691211-17691009 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 190

Conread position: 576-771
Cow position: chr23:18878787-18878988 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 139

Conread position: 586-775
Cow position: chr23:28510044-28510235 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 105

Show alignments to all cow chromosomes.