Cow genome map
Conread name: | Ss1.1-Mixc-0029d09.5 |
Conread position: | 520-792 |
Cow position: | chr23:16238062-16237781 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 105, 19 |
Conread position: | 534-751 |
Cow position: | chr23:10164824-10164611 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 154 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 94, 7 |
Conread position: | 534-764 |
Cow position: | chr23:31584827-31585067 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 94, 101 |
Conread position: | 546-764 |
Cow position: | chr23:35284983-35284755 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 83, 89 |
Conread position: | 546-771 |
Cow position: | chr23:6698370-6698612 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 171 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 546-777 |
Cow position: | chr23:19056824-19056581 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 89, 82 |
Conread position: | 557-746 |
Cow position: | chr23:30716725-30716531 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 71, 39 |
Conread position: | 557-771 |
Cow position: | chr23:7265868-7265653 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 68, 125 |
Conread position: | 557-771 |
Cow position: | chr23:10955812-10956043 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 30, 102 |
Conread position: | 557-771 |
Cow position: | chr23:20862003-20862222 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 154 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 71, 129 |
Conread position: | 558-748 |
Cow position: | chr23:1952088-1952279 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 24, 59 |
Conread position: | 558-757 |
Cow position: | chr23:25357892-25358090 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 140 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 71, 82 |
Conread position: | 558-764 |
Cow position: | chr23:1337941-1337737 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 146 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 69, 129 |
Conread position: | 558-771 |
Cow position: | chr23:11209334-11209557 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 155 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 67, 77 |
Conread position: | 558-771 |
Cow position: | chr23:26305718-26305938 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 71, 133 |
Conread position: | 558-774 |
Cow position: | chr23:13511074-13511301 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 558-779 |
Cow position: | chr23:27899691-27899922 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 157 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 70, 157 |
Conread position: | 558-802 |
Cow position: | chr23:2032941-2033201 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 559-748 |
Cow position: | chr23:7494176-7494362 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-748 |
Cow position: | chr23:14215684-14215486 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 70, 76 |
Conread position: | 559-748 |
Cow position: | chr23:28084705-28084903 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 76, 71 |
Conread position: | 559-748 |
Cow position: | chr23:35683383-35683185 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-763 |
Cow position: | chr23:27314293-27314508 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 559-764 |
Cow position: | chr23:954250-954035 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-764 |
Cow position: | chr23:977499-977285 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:2723296-2723511 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:3549645-3549430 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:4100428-4100643 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 149 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 70, 131 |
Conread position: | 559-764 |
Cow position: | chr23:4266986-4267201 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-764 |
Cow position: | chr23:4532152-4531937 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 559-764 |
Cow position: | chr23:9267312-9267098 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-764 |
Cow position: | chr23:10874112-10873897 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 76, 71 |
Conread position: | 559-764 |
Cow position: | chr23:10936747-10936532 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 71 |
Conread position: | 559-764 |
Cow position: | chr23:11079935-11080150 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-764 |
Cow position: | chr23:19316661-19316446 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 559-764 |
Cow position: | chr23:19948472-19948258 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 76, 69 |
Conread position: | 559-764 |
Cow position: | chr23:21009236-21009451 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:29043334-29043549 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 70, 131 |
Conread position: | 559-764 |
Cow position: | chr23:39745410-39745625 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:39784307-39784522 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 559-764 |
Cow position: | chr23:40710471-40710686 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-764 |
Cow position: | chr23:41015479-41015694 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 559-766 |
Cow position: | chr23:25351910-25352128 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 66, 75 |
Conread position: | 559-771 |
Cow position: | chr23:31607951-31607730 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 153 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 66, 93 |
Conread position: | 559-779 |
Cow position: | chr23:3488643-3488410 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 66, 168 |
Conread position: | 560-764 |
Cow position: | chr23:671721-671935 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 68, 74 |
Conread position: | 560-780 |
Cow position: | chr23:15865800-15865570 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 65, 169 |
Conread position: | 561-764 |
Cow position: | chr23:25192862-25192649 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 67, 73 |
Conread position: | 562-767 |
Cow position: | chr23:29346922-29346707 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 566-748 |
Cow position: | chr23:573710-573519 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 68 |
Conread position: | 566-766 |
Cow position: | chr23:17691211-17691009 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 139 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 62, 190 |
Conread position: | 576-771 |
Cow position: | chr23:18878787-18878988 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 140 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 52, 139 |
Conread position: | 586-775 |
Cow position: | chr23:28510044-28510235 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 132 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 44, 105 |
Show alignments to all cow chromosomes.