Cow genome map
| Conread name: | Ss1.1-Mixc-0029d09.5 |
| Conread position: | 520-769 |
| Cow position: | chr26:26192183-26191936 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 534-764 |
| Cow position: | chr26:1342724-1342483 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 535-773 |
| Cow position: | chr26:7307556-7307800 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 536-748 |
| Cow position: | chr26:3571873-3571652 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 536-796 |
| Cow position: | chr26:23889976-23890247 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 541-756 |
| Cow position: | chr26:20497114-20497343 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 543-764 |
| Cow position: | chr26:30754194-30754425 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 92 |
| Conread position: | 546-764 |
| Cow position: | chr26:2318606-2318378 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 88 |
| Conread position: | 546-771 |
| Cow position: | chr26:16508645-16508882 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 546-774 |
| Cow position: | chr26:3097066-3096825 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 89, 82 |
| Conread position: | 547-773 |
| Cow position: | chr26:4111702-4111461 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 551-748 |
| Cow position: | chr26:17314426-17314220 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 554-780 |
| Cow position: | chr26:19322183-19322413 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 89 |
| Conread position: | 555-738 |
| Cow position: | chr26:24223709-24223890 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 87 |
| Conread position: | 556-771 |
| Cow position: | chr26:2770549-2770325 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 170 |
| Conread position: | 557-747 |
| Cow position: | chr26:21691778-21691579 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 128 |
| Conread position: | 557-748 |
| Cow position: | chr26:30982258-30982058 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 557-771 |
| Cow position: | chr26:19791816-19791594 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 164 |
| Conread position: | 557-771 |
| Cow position: | chr26:29157324-29157543 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 129 |
| Conread position: | 557-773 |
| Cow position: | chr26:7603656-7603429 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 201 |
| Conread position: | 557-773 |
| Cow position: | chr26:12249292-12249515 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 557-779 |
| Cow position: | chr26:17663449-17663689 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 559-747 |
| Cow position: | chr26:26273113-26273309 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 186 |
| Conread position: | 559-748 |
| Cow position: | chr26:8885438-8885636 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 559-748 |
| Cow position: | chr26:13183906-13184104 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-748 |
| Cow position: | chr26:18928871-18929069 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-763 |
| Cow position: | chr26:5430216-5430002 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-764 |
| Cow position: | chr26:1088773-1088989 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr26:2479539-2479324 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:2487099-2487314 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:4440175-4439960 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:4486106-4486321 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:7677330-7677545 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 559-764 |
| Cow position: | chr26:7950885-7951100 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 559-764 |
| Cow position: | chr26:8084422-8084637 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 559-764 |
| Cow position: | chr26:9115634-9115849 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 559-764 |
| Cow position: | chr26:11537421-11537636 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:16888039-16887824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr26:17799001-17798786 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 559-764 |
| Cow position: | chr26:19181481-19181266 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:26612052-26612267 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 559-764 |
| Cow position: | chr26:28706467-28706252 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:33879452-33879243 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-764 |
| Cow position: | chr26:34265560-34265775 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-766 |
| Cow position: | chr26:30716881-30717097 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 559-767 |
| Cow position: | chr26:29433828-29434046 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 559-771 |
| Cow position: | chr26:9632984-9632762 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 559-774 |
| Cow position: | chr26:1636818-1636592 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 559-787 |
| Cow position: | chr26:9825535-9825294 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 564-745 |
| Cow position: | chr26:3725760-3725941 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 565-748 |
| Cow position: | chr26:25333489-25333680 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 566-771 |
| Cow position: | chr26:35073753-35073970 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 213 |
| Conread position: | 571-736 |
| Cow position: | chr26:28438097-28438272 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.