Cow genome map


           Conread name:
           Ss1.1-Mixc-0030,b06.3
        

               Conread position:
               1383-1461
               

               Cow position:
               chr18:16302324-16302246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               73
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1449-1586
               

               Cow position:
               chr18:16262071-16261933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               125
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1585-1669
               

               Cow position:
               chr18:16261370-16261286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1660-1787
               

               Cow position:
               chr18:16256704-16256576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1786-1926
               

               Cow position:
               chr18:16253164-16253023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               130
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               2040-3204
               

               Cow position:
               chr18:16253016-16251887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1180
               

               Alignm identity:
               890
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 233
               
Show alignments to all cow chromosomes.