Cow genome map

Conread name: Ss1.1-Mixc-0031,e07.3

Conread position: 625-1076
Cow position: chr14:447470-447920 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 277
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 15

Conread position: 631-1075
Cow position: chr14:25783986-25784430 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 276
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 263, 258

Conread position: 633-1078
Cow position: chr14:25795042-25794597 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 277
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 94

Conread position: 634-993
Cow position: chr14:25859745-25860104 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 69

Conread position: 636-1063
Cow position: chr14:25859243-25859670 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 199, 177

Conread position: 636-1082
Cow position: chr14:25876294-25876742 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 272
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 32

Conread position: 637-1010
Cow position: chr14:25836107-25836480 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 63

Conread position: 640-1009
Cow position: chr14:25836530-25836899 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 54

Conread position: 640-1016
Cow position: chr14:25859415-25859791 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 231
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 155, 136

Conread position: 640-1017
Cow position: chr14:25859499-25859876 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 53

Conread position: 640-1077
Cow position: chr14:25876550-25876987 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 280
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 51

Conread position: 640-1083
Cow position: chr14:25860003-25860448 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 282
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 368, 388

Conread position: 640-1083
Cow position: chr14:25877054-25877499 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 439, 0

Conread position: 640-1088
Cow position: chr14:25859331-25859778 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 275
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 195, 185

Conread position: 641-1077
Cow position: chr14:25876467-25876903 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 24

Conread position: 641-1083
Cow position: chr14:25836195-25836639 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 279
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 172, 182

Conread position: 642-956
Cow position: chr14:25910980-25911294 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 642-992
Cow position: chr14:3127621-3127271 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 123

Conread position: 642-1004
Cow position: chr14:3156131-3156493 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 224
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 39

Conread position: 642-1005
Cow position: chr14:3155474-3155837 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 134

Conread position: 642-1006
Cow position: chr14:25860089-25860453 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 16, 21

Conread position: 642-1009
Cow position: chr14:25794529-25794160 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 230
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 183, 253

Conread position: 642-1010
Cow position: chr14:25836448-25836816 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 145, 138

Conread position: 642-1016
Cow position: chr14:25859585-25859959 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 234
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 642-1016
Cow position: chr14:25877140-25877514 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 193, 183

Conread position: 642-1017
Cow position: chr14:25794697-25794321 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 233
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 56

Conread position: 642-1017
Cow position: chr14:25795285-25794910 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 178, 171

Conread position: 642-1018
Cow position: chr14:25784165-25784541 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 238, 252

Conread position: 642-1029
Cow position: chr14:25910896-25911283 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 247
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 105, 101

Conread position: 642-1043
Cow position: chr14:25876636-25877037 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 376, 381

Conread position: 642-1063
Cow position: chr14:25795201-25794780 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 260
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 642-1068
Cow position: chr14:25784249-25784675 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 181

Conread position: 642-1075
Cow position: chr14:25783409-25783842 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 238, 252

Conread position: 642-1075
Cow position: chr14:25783493-25783926 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 269
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 642-1075
Cow position: chr14:25783577-25784010 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 258
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 238, 252

Conread position: 642-1075
Cow position: chr14:25783745-25784178 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 134

Conread position: 642-1075
Cow position: chr14:25783829-25784262 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 259
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 238, 252

Conread position: 642-1075
Cow position: chr14:25783913-25784346 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 181

Conread position: 642-1075
Cow position: chr14:25784081-25784514 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 67, 52

Conread position: 642-1075
Cow position: chr14:25836784-25837217 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 271
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 213, 207

Conread position: 642-1075
Cow position: chr14:25860341-25860774 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 268
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 193, 171

Conread position: 642-1075
Cow position: chr14:25877392-25877825 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 272
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 193, 171

Conread position: 642-1077
Cow position: chr14:25836364-25836799 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 130

Conread position: 642-1077
Cow position: chr14:25836616-25837051 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 642-1078
Cow position: chr14:25876972-25877408 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 76

Conread position: 643-1036
Cow position: chr14:3101270-3100881 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 238
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 38

Conread position: 646-1009
Cow position: chr14:25895267-25895630 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 646-1009
Cow position: chr14:25896023-25896386 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 229
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 66

Conread position: 646-1010
Cow position: chr14:3080693-3080329 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 223
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 646-1029
Cow position: chr14:3080609-3080226 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 234
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 120

Conread position: 646-1077
Cow position: chr14:3080525-3080094 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 261
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 119

Conread position: 646-1077
Cow position: chr14:3080777-3080346 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 266
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 35

Conread position: 646-1077
Cow position: chr14:25895519-25895950 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 251
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 189, 180

Conread position: 646-1078
Cow position: chr14:25876724-25877156 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 167

Conread position: 647-1075
Cow position: chr14:25795364-25794936 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 249
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 648-1000
Cow position: chr14:25860431-25860783 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 56

Conread position: 648-1011
Cow position: chr14:25877482-25877845 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 56

Conread position: 648-1075
Cow position: chr14:25910738-25911161 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 264
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 650-916
Cow position: chr14:25836960-25837226 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 650-1009
Cow position: chr14:25895607-25895966 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 185, 175

Conread position: 650-1078
Cow position: chr14:25836036-25836464 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 205, 199

Conread position: 653-1016
Cow position: chr14:25860268-25860631 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 50

Conread position: 653-1018
Cow position: chr14:3127862-3127497 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 28

Conread position: 653-1049
Cow position: chr14:25836291-25836687 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 653-1076
Cow position: chr14:25895358-25895781 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 247
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 653-1077
Cow position: chr14:447749-448173 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 262
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 112

Conread position: 653-1077
Cow position: chr14:3080098-3079674 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 260
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 185, 162

Conread position: 653-1077
Cow position: chr14:3080350-3079926 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 256
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 112

Conread position: 653-1077
Cow position: chr14:3127778-3127354 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 270
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 160, 170

Conread position: 653-1077
Cow position: chr14:25836711-25837135 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 269
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 74, 44

Conread position: 653-1077
Cow position: chr14:25860184-25860608 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 123

Conread position: 653-1077
Cow position: chr14:25877235-25877659 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 263
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 130, 123

Conread position: 653-1077
Cow position: chr14:25877319-25877743 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 266
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 58, 38

Conread position: 653-1078
Cow position: chr14:25859680-25860105 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 270
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 46

Conread position: 653-1088
Cow position: chr14:25910823-25911257 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 265
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 64

Conread position: 654-1033
Cow position: chr14:3100760-3100382 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 27

Conread position: 654-1081
Cow position: chr14:680216-680644 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 254
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 127

Conread position: 658-1009
Cow position: chr14:25895027-25895378 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 142

Conread position: 658-1077
Cow position: chr14:25835792-25836211 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 247
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 163, 176

Conread position: 658-1077
Cow position: chr14:25859181-25859600 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 254
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 35

Conread position: 660-1009
Cow position: chr14:25859855-25860204 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 221
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 40

Conread position: 660-1015
Cow position: chr14:447672-448027 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 153, 163

Conread position: 660-1017
Cow position: chr14:25794763-25794406 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 226
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 37

Conread position: 660-1067
Cow position: chr14:3155408-3155815 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 256
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 110, 105

Conread position: 660-1075
Cow position: chr14:3155981-3156396 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 261
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 153, 169

Conread position: 660-1077
Cow position: chr14:447588-448005 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 258
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 21

Conread position: 660-1077
Cow position: chr14:3080175-3079758 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 258
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 153, 163

Conread position: 660-1077
Cow position: chr14:3156065-3156482 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 271
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 109, 105

Conread position: 660-1077
Cow position: chr14:25895197-25895614 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 259
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 66

Conread position: 660-1088
Cow position: chr14:25895701-25896128 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 269
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 157, 141

Conread position: 661-1077
Cow position: chr14:680475-680891 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 380, 402

Conread position: 662-1009
Cow position: chr14:3128105-3127758 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 176, 151

Conread position: 662-1082
Cow position: chr14:25783345-25783767 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 32

Conread position: 663-1077
Cow position: chr14:3155900-3156314 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 259
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 48, 34

Conread position: 669-1077
Cow position: chr14:3081006-3080598 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 252
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 12

Conread position: 678-1001
Cow position: chr14:680660-680983 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 217, 207

Conread position: 682-1077
Cow position: chr14:433831-434226 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 246
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 20

Conread position: 684-1106
Cow position: chr14:680834-681255 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 257
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 132, 146

Conread position: 687-1065
Cow position: chr14:3128164-3127786 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 235
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 10

Conread position: 716-1069
Cow position: chr14:25795463-25795110 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 167, 143

Conread position: 742-1082
Cow position: chr14:3155406-3155746 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 71

Show alignments to all cow chromosomes.