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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0031,e07.3
        

               
Conread position:
               
619-1082
               

               
Cow position:
               
chr18:41949050-41948588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
624-1082
               

               
Cow position:
               
chr18:50848302-50848759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
180, 8
               

               
Conread position:
               
625-1008
               

               
Cow position:
               
chr18:42744413-42744033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
625-1077
               

               
Cow position:
               
chr18:42837632-42837183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
627-1083
               

               
Cow position:
               
chr18:40074906-40075364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
629-1017
               

               
Cow position:
               
chr18:52427854-52428242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
629-1077
               

               
Cow position:
               
chr18:44154146-44153705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
412, 160
               

               
Conread position:
               
629-1082
               

               
Cow position:
               
chr18:50021927-50021469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 57
               

               
Conread position:
               
629-1082
               

               
Cow position:
               
chr18:50083503-50083958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
140, 136
               

               
Conread position:
               
631-1077
               

               
Cow position:
               
chr18:55008782-55009228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
632-1075
               

               
Cow position:
               
chr18:44154224-44153791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
632-1082
               

               
Cow position:
               
chr18:44398047-44397595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
257, 262
               

               
Conread position:
               
633-1086
               

               
Cow position:
               
chr18:53559986-53560438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
634-947
               

               
Cow position:
               
chr18:40324238-40323926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
634-1016
               

               
Cow position:
               
chr18:42791694-42792076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
634-1024
               

               
Cow position:
               
chr18:40086206-40085824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
634-1029
               

               
Cow position:
               
chr18:42960157-42959762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 164
               

               
Conread position:
               
634-1075
               

               
Cow position:
               
chr18:42959905-42959473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 146
               

               
Conread position:
               
636-1083
               

               
Cow position:
               
chr18:53526004-53526451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
637-1016
               

               
Cow position:
               
chr18:42792201-42792580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
637-1017
               

               
Cow position:
               
chr18:44240070-44240450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
168, 185
               

               
Conread position:
               
637-1018
               

               
Cow position:
               
chr18:50099287-50099669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 129
               

               
Conread position:
               
637-1039
               

               
Cow position:
               
chr18:41197972-41198374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
637-1054
               

               
Cow position:
               
chr18:53635396-53634979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
6, 190
               

               
Conread position:
               
637-1070
               

               
Cow position:
               
chr18:50281903-50282336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
637-1074
               

               
Cow position:
               
chr18:56128769-56129207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
637-1075
               

               
Cow position:
               
chr18:44254078-44253644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 158
               

               
Conread position:
               
637-1082
               

               
Cow position:
               
chr18:42675008-42674561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
637-1083
               

               
Cow position:
               
chr18:42674840-42674394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
158, 152
               

               
Conread position:
               
637-1093
               

               
Cow position:
               
chr18:50271690-50272145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
638-786
               

               
Cow position:
               
chr18:42959574-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
638-804
               

               
Cow position:
               
chr18:43022169-43022003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
638-1017
               

               
Cow position:
               
chr18:43022421-43022042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
638-1017
               

               
Cow position:
               
chr18:44240323-44240702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
188, 170
               

               
Conread position:
               
638-1037
               

               
Cow position:
               
chr18:43175210-43174810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
337, 325
               

               
Conread position:
               
638-1040
               

               
Cow position:
               
chr18:49033320-49032918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
638-1068
               

               
Cow position:
               
chr18:43022757-43022327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
638-1075
               

               
Cow position:
               
chr18:41949118-41948681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
638-1075
               

               
Cow position:
               
chr18:44398377-44397940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
638-1077
               

               
Cow position:
               
chr18:43175546-43175107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 182
               

               
Conread position:
               
638-1077
               

               
Cow position:
               
chr18:54967850-54968287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
638-1078
               

               
Cow position:
               
chr18:55523454-55523894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
197, 187
               

               
Conread position:
               
638-1082
               

               
Cow position:
               
chr18:43167938-43168384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 138
               

               
Conread position:
               
638-1083
               

               
Cow position:
               
chr18:54993134-54993581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
639-1009
               

               
Cow position:
               
chr18:56316364-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
639-1039
               

               
Cow position:
               
chr18:43022504-43022104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
177, 184
               

               
Conread position:
               
639-1077
               

               
Cow position:
               
chr18:51368287-51367849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
229, 220
               

               
Conread position:
               
640-985
               

               
Cow position:
               
chr18:51812316-51811971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 136
               

               
Conread position:
               
640-991
               

               
Cow position:
               
chr18:51874288-51874639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 136
               

               
Conread position:
               
640-1001
               

               
Cow position:
               
chr18:51752103-51751742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
195, 186
               

               
Conread position:
               
640-1007
               

               
Cow position:
               
chr18:51765934-51765567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
215, 209
               

               
Conread position:
               
640-1008
               

               
Cow position:
               
chr18:51789073-51788705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
640-1009
               

               
Cow position:
               
chr18:50059223-50058854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
321, 315
               

               
Conread position:
               
640-1016
               

               
Cow position:
               
chr18:51969321-51969695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
185, 194
               

               
Conread position:
               
640-1016
               

               
Cow position:
               
chr18:51969405-51969779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
640-1037
               

               
Cow position:
               
chr18:51789577-51789180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 160
               

               
Conread position:
               
640-1056
               

               
Cow position:
               
chr18:51969655-51970062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
215, 149
               

               
Conread position:
               
640-1068
               

               
Cow position:
               
chr18:51812904-51812476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
640-1082
               

               
Cow position:
               
chr18:51752187-51751743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
215, 209
               

               
Conread position:
               
640-1084
               

               
Cow position:
               
chr18:50058803-50058360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
641-997
               

               
Cow position:
               
chr18:50281739-50282095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
641-1000
               

               
Cow position:
               
chr18:42744148-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 208
               

               
Conread position:
               
641-1009
               

               
Cow position:
               
chr18:51752270-51751902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 164
               

               
Conread position:
               
641-1009
               

               
Cow position:
               
chr18:54979877-54980245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
641-1010
               

               
Cow position:
               
chr18:50083347-50083716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1017
               

               
Cow position:
               
chr18:51367614-51367238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
185, 158
               

               
Conread position:
               
641-1017
               

               
Cow position:
               
chr18:51839244-51838868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
194, 185
               

               
Conread position:
               
641-1018
               

               
Cow position:
               
chr18:56330206-56329829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 135
               

               
Conread position:
               
641-1023
               

               
Cow position:
               
chr18:51400849-51401231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
192, 172
               

               
Conread position:
               
641-1037
               

               
Cow position:
               
chr18:54993221-54993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1038
               

               
Cow position:
               
chr18:54993473-54993870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1041
               

               
Cow position:
               
chr18:50099040-50099440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
641-1063
               

               
Cow position:
               
chr18:51368201-51367780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
641-1077
               

               
Cow position:
               
chr18:50083599-50084035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
641-1077
               

               
Cow position:
               
chr18:53587018-53586582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1080
               

               
Cow position:
               
chr18:43168109-43168548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
214, 208
               

               
Conread position:
               
641-1082
               

               
Cow position:
               
chr18:42792373-42792816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1082
               

               
Cow position:
               
chr18:51812567-51812124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
190, 197
               

               
Conread position:
               
641-1083
               

               
Cow position:
               
chr18:1417983-1418427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
641-1083
               

               
Cow position:
               
chr18:54979961-54980405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
196, 184
               

               
Conread position:
               
641-1086
               

               
Cow position:
               
chr18:54968103-54968550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1086
               

               
Cow position:
               
chr18:55018197-55018644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
641-1086
               

               
Cow position:
               
chr18:56434110-56434557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
641-1094
               

               
Cow position:
               
chr18:51789408-51788955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
642-920
               

               
Cow position:
               
chr18:40075425-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
642-924
               

               
Cow position:
               
chr18:14453138-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
642-964
               

               
Cow position:
               
chr18:51788987-51788666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 138
               

               
Conread position:
               
642-970
               

               
Cow position:
               
chr18:42959738-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
192, 171
               

               
Conread position:
               
642-982
               

               
Cow position:
               
chr18:43048662-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
642-984
               

               
Cow position:
               
chr18:55066708-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
642-986
               

               
Cow position:
               
chr18:49032392-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
310, 301
               

               
Conread position:
               
642-987
               

               
Cow position:
               
chr18:44397869-44397524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
642-993
               

               
Cow position:
               
chr18:33063948-33063597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
642-1001
               

               
Cow position:
               
chr18:41198397-41198756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
642-1006
               

               
Cow position:
               
chr18:50030919-50030550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
642-1006
               

               
Cow position:
               
chr18:50271611-50271975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1008
               

               
Cow position:
               
chr18:41948694-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
642-1008
               

               
Cow position:
               
chr18:52011873-52011504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
642-1009
               

               
Cow position:
               
chr18:33064704-33064337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
150, 138
               

               
Conread position:
               
642-1010
               

               
Cow position:
               
chr18:40086532-40086166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
323, 303
               

               
Conread position:
               
642-1010
               

               
Cow position:
               
chr18:40306823-40307191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1010
               

               
Cow position:
               
chr18:42792290-42792658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
642-1010
               

               
Cow position:
               
chr18:43174870-43174502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
184, 165
               

               
Conread position:
               
642-1010
               

               
Cow position:
               
chr18:52012377-52012009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
171, 187
               

               
Conread position:
               
642-1011
               

               
Cow position:
               
chr18:42960065-42959705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
304, 0
               

               
Conread position:
               
642-1016
               

               
Cow position:
               
chr18:51839327-51838953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
214, 207
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:33064200-33063825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:33064620-33064245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:33093040-33092665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
151, 137
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:41198147-41198520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:41949198-41948823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:42791030-42791405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:42985410-42985035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
158, 148
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:43022921-43022546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:43119921-43119546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:51765344-51764969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
188, 165
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:51766016-51765641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 161
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:52011957-52011582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 128
               

               
Conread position:
               
642-1017
               

               
Cow position:
               
chr18:52447930-52448306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
184, 171
               

               
Conread position:
               
642-1018
               

               
Cow position:
               
chr18:42791114-42791490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
642-1018
               

               
Cow position:
               
chr18:42791366-42791742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
642-1018
               

               
Cow position:
               
chr18:50099629-50100005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
642-1018
               

               
Cow position:
               
chr18:50250984-50251357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
642-1018
               

               
Cow position:
               
chr18:51839159-51838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
181, 163
               

               
Conread position:
               
642-1019
               

               
Cow position:
               
chr18:42792038-42792415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
129, 123
               

               
Conread position:
               
642-1024
               

               
Cow position:
               
chr18:41197641-41198023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
642-1024
               

               
Cow position:
               
chr18:41198229-41198611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
642-1024
               

               
Cow position:
               
chr18:43093520-43093138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
150, 138
               

               
Conread position:
               
642-1029
               

               
Cow position:
               
chr18:42675087-42674700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
152, 134
               

               
Conread position:
               
642-1031
               

               
Cow position:
               
chr18:51789323-51788934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 196
               

               
Conread position:
               
642-1039
               

               
Cow position:
               
chr18:33092872-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
642-1039
               

               
Cow position:
               
chr18:40086114-40085724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
642-1039
               

               
Cow position:
               
chr18:43022837-43022440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 128
               

               
Conread position:
               
642-1039
               

               
Cow position:
               
chr18:55017946-55018343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
642-1062
               

               
Cow position:
               
chr18:43174954-43174535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
642-1063
               

               
Cow position:
               
chr18:42744315-42743894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
642-1066
               

               
Cow position:
               
chr18:51789659-51789235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
188, 171
               

               
Conread position:
               
642-1066
               

               
Cow position:
               
chr18:52447174-52447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
642-1067
               

               
Cow position:
               
chr18:42744231-42743806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
214, 207
               

               
Conread position:
               
642-1067
               

               
Cow position:
               
chr18:51765428-51765003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
171, 179
               

               
Conread position:
               
642-1068
               

               
Cow position:
               
chr18:42985074-42984648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
642-1068
               

               
Cow position:
               
chr18:43022585-43022159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 171
               

               
Conread position:
               
642-1068
               

               
Cow position:
               
chr18:44184484-44184058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
642-1068
               

               
Cow position:
               
chr18:44240243-44240669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
642-1069
               

               
Cow position:
               
chr18:51368452-51368025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
193, 184
               

               
Conread position:
               
642-1073
               

               
Cow position:
               
chr18:52427951-52428383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
642-1073
               

               
Cow position:
               
chr18:52433132-52433564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
124, 130
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:41949282-41948849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:42744483-42744050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
142, 134
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:42827470-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:42984906-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:43093268-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:44239823-44240256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:44239907-44240340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
252, 246
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:44398121-44397688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
195, 184
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:51368536-51368103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
193, 183
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:52427783-52428216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 130
               

               
Conread position:
               
642-1075
               

               
Cow position:
               
chr18:54992718-54993151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
642-1076
               

               
Cow position:
               
chr18:50059137-50058703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:40075089-40075524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:42675255-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:49022880-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:49032812-49032377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:53560328-53560763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
642-1077
               

               
Cow position:
               
chr18:53586597-53586162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
642-1078
               

               
Cow position:
               
chr18:43120257-43119821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
229, 246
               

               
Conread position:
               
642-1078
               

               
Cow position:
               
chr18:44184568-44184132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
642-1078
               

               
Cow position:
               
chr18:53560076-53560512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
193, 183
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:41197557-41197999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:42744567-42744127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:42744651-42744209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
194, 171
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:42792122-42792564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:43093604-43093162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:43120089-43119647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
242, 223
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:43167774-43168216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:43168026-43168468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:50246059-50246501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:51812818-51812376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
188, 171
               

               
Conread position:
               
642-1082
               

               
Cow position:
               
chr18:52447678-52448120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:1417816-1418259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
188, 158
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:40324482-40324039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
171, 189
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:41197809-41198252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:50048989-50048548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:54993390-54993833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:55018030-55018473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
642-1083
               

               
Cow position:
               
chr18:55018366-55018810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
642-1084
               

               
Cow position:
               
chr18:54980046-54980487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
642-1086
               

               
Cow position:
               
chr18:54979794-54980240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
642-1086
               

               
Cow position:
               
chr18:54992802-54993248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
642-1086
               

               
Cow position:
               
chr18:55018114-55018560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
642-1088
               

               
Cow position:
               
chr18:44253657-44253224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
642-1088
               

               
Cow position:
               
chr18:50848737-50849184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
642-1089
               

               
Cow position:
               
chr18:42791786-42792236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
642-1090
               

               
Cow position:
               
chr18:42791198-42791646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
642-1092
               

               
Cow position:
               
chr18:1418068-1418518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
642-1095
               

               
Cow position:
               
chr18:50295422-50295874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
642-1097
               

               
Cow position:
               
chr18:14453954-14453500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
151, 134
               

               
Conread position:
               
642-1098
               

               
Cow position:
               
chr18:50848485-50848945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
643-1010
               

               
Cow position:
               
chr18:56247662-56247303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
228, 146
               

               
Conread position:
               
643-1017
               

               
Cow position:
               
chr18:40324982-40324611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
643-1075
               

               
Cow position:
               
chr18:41198064-41198494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
643-1075
               

               
Cow position:
               
chr18:42985577-42985145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
179, 162
               

               
Conread position:
               
643-1083
               

               
Cow position:
               
chr18:50059556-50059114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
643-1088
               

               
Cow position:
               
chr18:49033401-49032955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
646-948
               

               
Cow position:
               
chr18:51766093-51765794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
646-994
               

               
Cow position:
               
chr18:42792546-42792894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
646-997
               

               
Cow position:
               
chr18:56267474-56267122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
646-1018
               

               
Cow position:
               
chr18:50848657-50849029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 122
               

               
Conread position:
               
646-1018
               

               
Cow position:
               
chr18:53498381-53498750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
646-1040
               

               
Cow position:
               
chr18:49032976-49032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
646-1075
               

               
Cow position:
               
chr18:44154468-44154036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 207
               

               
Conread position:
               
646-1075
               

               
Cow position:
               
chr18:53559828-53560257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
646-1075
               

               
Cow position:
               
chr18:55067040-55066611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
646-1077
               

               
Cow position:
               
chr18:50848405-50848836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
646-1077
               

               
Cow position:
               
chr18:53586929-53586498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
646-1082
               

               
Cow position:
               
chr18:50059469-50059031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
646-1082
               

               
Cow position:
               
chr18:50083436-50083874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 130
               

               
Conread position:
               
646-1082
               

               
Cow position:
               
chr18:50083772-50084210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
646-1082
               

               
Cow position:
               
chr18:53560164-53560602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 119
               

               
Conread position:
               
646-1082
               

               
Cow position:
               
chr18:56494082-56494518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 130
               

               
Conread position:
               
646-1083
               

               
Cow position:
               
chr18:40075009-40075448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
120, 104
               

               
Conread position:
               
646-1083
               

               
Cow position:
               
chr18:53560248-53560687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
646-1086
               

               
Cow position:
               
chr18:55066956-55066514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
647-992
               

               
Cow position:
               
chr18:40075346-40075691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 118
               

               
Conread position:
               
647-1017
               

               
Cow position:
               
chr18:52446927-52447297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
136, 129
               

               
Conread position:
               
647-1075
               

               
Cow position:
               
chr18:44398200-44397772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
647-1081
               

               
Cow position:
               
chr18:53498124-53498563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
647-1085
               

               
Cow position:
               
chr18:53586424-53585984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
122, 118
               

               
Conread position:
               
647-1086
               

               
Cow position:
               
chr18:55523379-55523820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
125, 103
               

               
Conread position:
               
648-1040
               

               
Cow position:
               
chr18:55008631-55009023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
648-1083
               

               
Cow position:
               
chr18:55523632-55524069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
650-1078
               

               
Cow position:
               
chr18:53509312-53509740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
650-1078
               

               
Cow position:
               
chr18:53525766-53526194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
650-1083
               

               
Cow position:
               
chr18:53509564-53509997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
652-1010
               

               
Cow position:
               
chr18:53635800-53635442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
252, 237
               

               
Conread position:
               
652-1017
               

               
Cow position:
               
chr18:49033054-49032689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
653-961
               

               
Cow position:
               
chr18:40085943-40085634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
170, 155
               

               
Conread position:
               
653-996
               

               
Cow position:
               
chr18:50282003-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
653-997
               

               
Cow position:
               
chr18:56329186-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
242, 236
               

               
Conread position:
               
653-1008
               

               
Cow position:
               
chr18:40306666-40307021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
653-1009
               

               
Cow position:
               
chr18:51400441-51400797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
170, 160
               

               
Conread position:
               
653-1009
               

               
Cow position:
               
chr18:56316462-56316818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
653-1009
               

               
Cow position:
               
chr18:56330026-56329670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
653-1010
               

               
Cow position:
               
chr18:49033221-49032864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
653-1011
               

               
Cow position:
               
chr18:50849084-50849442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:33064021-33063657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 194
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:33064525-33064161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
202, 190
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:51789144-51788780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
152, 145
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:52428214-52428578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:52428550-52428914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:52433395-52433759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1017
               

               
Cow position:
               
chr18:52433731-52434095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1019
               

               
Cow position:
               
chr18:53610138-53609772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
653-1020
               

               
Cow position:
               
chr18:52428634-52429001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1020
               

               
Cow position:
               
chr18:52433815-52434182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1029
               

               
Cow position:
               
chr18:56316210-56316586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
653-1067
               

               
Cow position:
               
chr18:53635631-53635217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
653-1067
               

               
Cow position:
               
chr18:56128534-56128948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
653-1077
               

               
Cow position:
               
chr18:53610222-53609798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
653-1077
               

               
Cow position:
               
chr18:53635547-53635123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
653-1077
               

               
Cow position:
               
chr18:56329522-56329098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 112
               

               
Conread position:
               
653-1077
               

               
Cow position:
               
chr18:56329690-56329266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
653-1082
               

               
Cow position:
               
chr18:51367853-51367423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
218, 45
               

               
Conread position:
               
653-1082
               

               
Cow position:
               
chr18:52447521-52447952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
653-1082
               

               
Cow position:
               
chr18:52447773-52448204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
653-1083
               

               
Cow position:
               
chr18:51400609-51401041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 146
               

               
Conread position:
               
653-1086
               

               
Cow position:
               
chr18:53498304-53498736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
653-1088
               

               
Cow position:
               
chr18:51812387-51811953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
284, 280
               

               
Conread position:
               
653-1088
               

               
Cow position:
               
chr18:52428466-52428900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
653-1088
               

               
Cow position:
               
chr18:52433647-52434081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
654-811
               

               
Cow position:
               
chr18:44240675-44240832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
654-918
               

               
Cow position:
               
chr18:44184220-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
654-991
               

               
Cow position:
               
chr18:50021731-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
654-995
               

               
Cow position:
               
chr18:14453210-14452869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
654-1000
               

               
Cow position:
               
chr18:1418248-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
654-1006
               

               
Cow position:
               
chr18:40324302-40323950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
654-1010
               

               
Cow position:
               
chr18:41948934-41948578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
240, 234
               

               
Conread position:
               
654-1015
               

               
Cow position:
               
chr18:50099557-50099918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:41198325-41198688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 122
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:44253322-44252960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
154, 168
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:52428131-52428494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
112, 116
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:52428383-52428746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 116
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:52433564-52433927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 116
               

               
Conread position:
               
654-1018
               

               
Cow position:
               
chr18:41948766-41948402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
241, 234
               

               
Conread position:
               
654-1018
               

               
Cow position:
               
chr18:50099809-50100173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
654-1024
               

               
Cow position:
               
chr18:40306247-40306617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
654-1032
               

               
Cow position:
               
chr18:52447438-52447815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 129
               

               
Conread position:
               
654-1036
               

               
Cow position:
               
chr18:43093424-43093042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
654-1039
               

               
Cow position:
               
chr18:42984978-42984593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
172, 159
               

               
Conread position:
               
654-1039
               

               
Cow position:
               
chr18:44240003-44240388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 187
               

               
Conread position:
               
654-1054
               

               
Cow position:
               
chr18:44184808-44184408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
654-1055
               

               
Cow position:
               
chr18:40324386-40323985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
149, 134
               

               
Conread position:
               
654-1063
               

               
Cow position:
               
chr18:14453294-14452885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
654-1066
               

               
Cow position:
               
chr18:50295266-50295678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
654-1067
               

               
Cow position:
               
chr18:52447606-52448019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 171
               

               
Conread position:
               
654-1068
               

               
Cow position:
               
chr18:42693382-42692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
172, 145
               

               
Conread position:
               
654-1069
               

               
Cow position:
               
chr18:44253813-44253398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
180, 159
               

               
Conread position:
               
654-1070
               

               
Cow position:
               
chr18:41197737-41198155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
129, 122
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:40324806-40324385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 122
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:42985482-42985061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
145, 136
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:43022993-43022572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
172, 152
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:44184724-44184303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:44397941-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:49022640-49023061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
654-1075
               

               
Cow position:
               
chr18:52447858-52448279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 116
               

               
Conread position:
               
654-1077
               

               
Cow position:
               
chr18:42837858-42837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
172, 159
               

               
Conread position:
               
654-1082
               

               
Cow position:
               
chr18:42791882-42792312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 187
               

               
Conread position:
               
654-1082
               

               
Cow position:
               
chr18:43094000-43093582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
142, 126
               

               
Conread position:
               
654-1082
               

               
Cow position:
               
chr18:44184388-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
240, 235
               

               
Conread position:
               
654-1082
               

               
Cow position:
               
chr18:50058873-50058445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
654-1083
               

               
Cow position:
               
chr18:44398277-44397846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
654-1083
               

               
Cow position:
               
chr18:53498471-53498902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
654-1094
               

               
Cow position:
               
chr18:51812638-51812198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
655-1075
               

               
Cow position:
               
chr18:43093675-43093255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
128, 121
               

               
Conread position:
               
655-1075
               

               
Cow position:
               
chr18:44154372-44153953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
158, 175
               

               
Conread position:
               
655-1075
               

               
Cow position:
               
chr18:44398444-44398024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 158
               

               
Conread position:
               
655-1077
               

               
Cow position:
               
chr18:33065027-33064605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
655-1078
               

               
Cow position:
               
chr18:53636137-53635710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
655-1082
               

               
Cow position:
               
chr18:14454025-14453596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 158
               

               
Conread position:
               
658-994
               

               
Cow position:
               
chr18:56329433-56329097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
658-1009
               

               
Cow position:
               
chr18:56330105-56329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
237, 215
               

               
Conread position:
               
658-1010
               

               
Cow position:
               
chr18:50246327-50246679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 142
               

               
Conread position:
               
658-1011
               

               
Cow position:
               
chr18:56493842-56494195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
658-1015
               

               
Cow position:
               
chr18:43167874-43168231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
658-1029
               

               
Cow position:
               
chr18:42792474-42792845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
168, 156
               

               
Conread position:
               
658-1029
               

               
Cow position:
               
chr18:50245991-50246362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
658-1068
               

               
Cow position:
               
chr18:42693630-42693221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
168, 182
               

               
Conread position:
               
658-1075
               

               
Cow position:
               
chr18:42791970-42792387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
658-1077
               

               
Cow position:
               
chr18:33064352-33063933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 172
               

               
Conread position:
               
658-1078
               

               
Cow position:
               
chr18:53525858-53526278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
111, 107
               

               
Conread position:
               
658-1078
               

               
Cow position:
               
chr18:53610384-53609965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
658-1082
               

               
Cow position:
               
chr18:42693462-42693037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
135, 117
               

               
Conread position:
               
658-1082
               

               
Cow position:
               
chr18:50059373-50058947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
658-1082
               

               
Cow position:
               
chr18:50099225-50099651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
658-1083
               

               
Cow position:
               
chr18:42693714-42693287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
658-1088
               

               
Cow position:
               
chr18:56329937-56329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
659-1068
               

               
Cow position:
               
chr18:42960216-42959807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
154, 164
               

               
Conread position:
               
659-1077
               

               
Cow position:
               
chr18:49032711-49032293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
660-931
               

               
Cow position:
               
chr18:43119735-43119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 112
               

               
Conread position:
               
660-946
               

               
Cow position:
               
chr18:42837432-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
660-964
               

               
Cow position:
               
chr18:56248159-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
660-986
               

               
Cow position:
               
chr18:44240513-44240839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
174, 153
               

               
Conread position:
               
660-1001
               

               
Cow position:
               
chr18:44184886-44184545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
168, 141
               

               
Conread position:
               
660-1006
               

               
Cow position:
               
chr18:33064098-33063752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
231, 225
               

               
Conread position:
               
660-1007
               

               
Cow position:
               
chr18:51400784-51401131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 169
               

               
Conread position:
               
660-1008
               

               
Cow position:
               
chr18:50099899-50100247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
660-1009
               

               
Cow position:
               
chr18:41949348-41948999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
660-1010
               

               
Cow position:
               
chr18:43048728-43048378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 153
               

               
Conread position:
               
660-1016
               

               
Cow position:
               
chr18:51400700-51401056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
660-1018
               

               
Cow position:
               
chr18:50099395-50099753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1029
               

               
Cow position:
               
chr18:49032878-49032509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 163
               

               
Conread position:
               
660-1032
               

               
Cow position:
               
chr18:53509238-53509610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1038
               

               
Cow position:
               
chr18:56316049-56316427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
660-1055
               

               
Cow position:
               
chr18:50083870-50084265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
660-1068
               

               
Cow position:
               
chr18:40324716-40324308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
153, 171
               

               
Conread position:
               
660-1068
               

               
Cow position:
               
chr18:42693964-42693556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
660-1072
               

               
Cow position:
               
chr18:49032458-49032046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
280, 273
               

               
Conread position:
               
660-1075
               

               
Cow position:
               
chr18:56247991-56247566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:1418169-1418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:22634640-22635057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:33064854-33064437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 116
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:42837768-42837351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:43175104-43174687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
229, 235
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:49032626-49032209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
166, 155
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:50281842-50282259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:53635708-53635291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:55066858-55066441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
156, 163
               

               
Conread position:
               
660-1077
               

               
Cow position:
               
chr18:56316301-56316718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 163
               

               
Conread position:
               
660-1078
               

               
Cow position:
               
chr18:53586663-53586245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
137, 142
               

               
Conread position:
               
660-1078
               

               
Cow position:
               
chr18:54979560-54979978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
660-1078
               

               
Cow position:
               
chr18:54992904-54993322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1079
               

               
Cow position:
               
chr18:49032542-49032123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:50083702-50084126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 106
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:50246413-50246835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:50849007-50849431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:53525692-53526114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:56128457-56128881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
660-1082
               

               
Cow position:
               
chr18:56329599-56329177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1086
               

               
Cow position:
               
chr18:53586327-53585899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
660-1090
               

               
Cow position:
               
chr18:52447108-52447538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 131
               

               
Conread position:
               
661-964
               

               
Cow position:
               
chr18:50849176-50849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
661-1006
               

               
Cow position:
               
chr18:40306506-40306851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 104
               

               
Conread position:
               
661-1009
               

               
Cow position:
               
chr18:51368602-51368253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
661-1072
               

               
Cow position:
               
chr18:44239758-44240169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 115
               

               
Conread position:
               
661-1082
               

               
Cow position:
               
chr18:42675320-42674897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
661-1082
               

               
Cow position:
               
chr18:51400533-51400956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 168
               

               
Conread position:
               
662-1015
               

               
Cow position:
               
chr18:42694132-42693777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
662-1068
               

               
Cow position:
               
chr18:42985138-42984732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
662-1075
               

               
Cow position:
               
chr18:40324882-40324469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
173, 163
               

               
Conread position:
               
662-1082
               

               
Cow position:
               
chr18:42744715-42744293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
233, 228
               

               
Conread position:
               
662-1082
               

               
Cow position:
               
chr18:50098977-50099399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
662-1083
               

               
Cow position:
               
chr18:42827406-42827829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
662-1083
               

               
Cow position:
               
chr18:56494014-56494437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
159, 152
               

               
Conread position:
               
662-1131
               

               
Cow position:
               
chr18:50271463-50271932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
663-1000
               

               
Cow position:
               
chr18:42960296-42959959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 168
               

               
Conread position:
               
663-1017
               

               
Cow position:
               
chr18:40086601-40086241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
663-1043
               

               
Cow position:
               
chr18:50848924-50849306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
663-1072
               

               
Cow position:
               
chr18:43023068-43022659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
377, 386
               

               
Conread position:
               
664-946
               

               
Cow position:
               
chr18:43119815-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
162, 149
               

               
Conread position:
               
664-1017
               

               
Cow position:
               
chr18:52427637-52427990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
664-1018
               

               
Cow position:
               
chr18:55523984-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
664-1075
               

               
Cow position:
               
chr18:43175268-43174857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 389
               

               
Conread position:
               
664-1075
               

               
Cow position:
               
chr18:43175352-43174941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
231, 225
               

               
Conread position:
               
664-1075
               

               
Cow position:
               
chr18:52432986-52433397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
664-1090
               

               
Cow position:
               
chr18:52447364-52447790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
171, 161
               

               
Conread position:
               
664-1098
               

               
Cow position:
               
chr18:42693792-42693354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
406, 0
               

               
Conread position:
               
665-1077
               

               
Cow position:
               
chr18:33093101-33092689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
666-987
               

               
Cow position:
               
chr18:43022309-43021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
168, 147
               

               
Conread position:
               
666-1017
               

               
Cow position:
               
chr18:44154025-44153681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
666-1098
               

               
Cow position:
               
chr18:42693874-42693438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
160, 143
               

               
Conread position:
               
668-1011
               

               
Cow position:
               
chr18:42827580-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
669-994
               

               
Cow position:
               
chr18:56494189-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
669-1075
               

               
Cow position:
               
chr18:41197500-41197906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
669-1077
               

               
Cow position:
               
chr18:56493937-56494345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
669-1083
               

               
Cow position:
               
chr18:53586486-53586070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
673-1010
               

               
Cow position:
               
chr18:50098904-50099241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 92
               

               
Conread position:
               
674-1086
               

               
Cow position:
               
chr18:53497986-53498403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
675-1077
               

               
Cow position:
               
chr18:43175593-43175191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
675-1082
               

               
Cow position:
               
chr18:43093736-43093330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
676-1011
               

               
Cow position:
               
chr18:50295204-50295539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
677-1082
               

               
Cow position:
               
chr18:42675388-42674981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
680-1075
               

               
Cow position:
               
chr18:49021671-49022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
684-1015
               

               
Cow position:
               
chr18:50281698-50282029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
684-1082
               

               
Cow position:
               
chr18:50059599-50059199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
684-1082
               

               
Cow position:
               
chr18:50295380-50295778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
684-1083
               

               
Cow position:
               
chr18:50083306-50083707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
685-1082
               

               
Cow position:
               
chr18:43167733-43168132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
694-1001
               

               
Cow position:
               
chr18:50059674-50059366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
711-1082
               

               
Cow position:
               
chr18:42724621-42724248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
241, 232
               

               
Conread position:
               
716-1010
               

               
Cow position:
               
chr18:44184914-44184620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
717-1075
               

               
Cow position:
               
chr18:53559815-53560173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
341, 335
               

               
Conread position:
               
719-1082
               

               
Cow position:
               
chr18:50059732-50059367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
720-1075
               

               
Cow position:
               
chr18:44398463-44398108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
726-1006
               

               
Cow position:
               
chr18:51367613-51367333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
726-1029
               

               
Cow position:
               
chr18:42790946-42791249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
130, 123
               

               
Conread position:
               
729-1040
               

               
Cow position:
               
chr18:42960314-42960003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
730-1083
               

               
Cow position:
               
chr18:42827390-42827745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
731-1075
               

               
Cow position:
               
chr18:43048741-43048397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
217, 231
               

               
Conread position:
               
734-1077
               

               
Cow position:
               
chr18:42744727-42744384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
160, 154
               

               
Conread position:
               
737-1036
               

               
Cow position:
               
chr18:14453295-14452996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
834-1018
               

               
Cow position:
               
chr18:53636038-53635854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
855-1010
               

               
Cow position:
               
chr18:41949321-41949166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.