Cow genome map
| Conread name: | Ss1.1-Mixc-0031,e07.3 |
| Conread position: | 642-1082 |
| Cow position: | chr21:34223072-34222630 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 281 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 213, 207 |
| Conread position: | 653-992 |
| Cow position: | chr21:12659663-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 157, 146 |
| Conread position: | 653-1001 |
| Cow position: | chr21:34222893-34222545 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 173, 155 |
| Conread position: | 653-1009 |
| Cow position: | chr21:34222977-34222621 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 138, 123 |
| Conread position: | 653-1011 |
| Cow position: | chr21:12608603-12608245 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 185, 173 |
| Conread position: | 653-1016 |
| Cow position: | chr21:12608519-12608156 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 173, 149 |
| Conread position: | 653-1048 |
| Cow position: | chr21:12659327-12659722 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 117, 112 |
| Conread position: | 653-1054 |
| Cow position: | chr21:12659075-12659476 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 653-1077 |
| Cow position: | chr21:12658907-12659331 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 185, 173 |
| Conread position: | 653-1077 |
| Cow position: | chr21:12659243-12659667 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 653-1082 |
| Cow position: | chr21:12608855-12608426 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 145 |
| Conread position: | 658-1006 |
| Cow position: | chr21:12608766-12608418 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 660-992 |
| Cow position: | chr21:12608260-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 175, 141 |
| Conread position: | 660-1009 |
| Cow position: | chr21:12659586-12659935 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 175, 165 |
| Conread position: | 660-1016 |
| Cow position: | chr21:12658998-12659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 178, 166 |
| Conread position: | 660-1077 |
| Cow position: | chr21:12658830-12659247 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 153, 170 |
| Conread position: | 660-1082 |
| Cow position: | chr21:12659166-12659590 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 178, 155 |
| Conread position: | 660-1092 |
| Cow position: | chr21:12608344-12607911 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 141 |
| Conread position: | 663-1077 |
| Cow position: | chr21:12659505-12659919 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 678-1009 |
| Cow position: | chr21:12608914-12608583 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 855-1077 |
| Cow position: | chr21:12608905-12608683 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 171, 181 |
Show alignments to all cow chromosomes.