Cow genome map
| Conread name: | Ss1.1-Mixc-0031,e07.3 |
| Conread position: | 605-1075 |
| Cow position: | chr24:17035674-17035210 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 634-1077 |
| Cow position: | chr24:17036491-17036048 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 179, 200 |
| Conread position: | 638-941 |
| Cow position: | chr24:17013223-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 638-1075 |
| Cow position: | chr24:17035395-17034958 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 638-1076 |
| Cow position: | chr24:17035899-17035461 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 175 |
| Conread position: | 638-1097 |
| Cow position: | chr24:17036067-17035608 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 640-1095 |
| Cow position: | chr24:17078116-17077661 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 642-994 |
| Cow position: | chr24:17070690-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 642-1017 |
| Cow position: | chr24:17070522-17070897 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 141, 134 |
| Conread position: | 642-1066 |
| Cow position: | chr24:17036231-17035807 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 642-1075 |
| Cow position: | chr24:17078030-17077597 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 642-1077 |
| Cow position: | chr24:17036399-17035964 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 171 |
| Conread position: | 642-1082 |
| Cow position: | chr24:17035475-17035035 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 642-1082 |
| Cow position: | chr24:17036147-17035705 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 642-1097 |
| Cow position: | chr24:17036315-17035860 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 653-1092 |
| Cow position: | chr24:17035968-17035529 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 654-1077 |
| Cow position: | chr24:17035715-17035292 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 660-1080 |
| Cow position: | chr24:17035541-17035121 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 119 |
| Conread position: | 660-1081 |
| Cow position: | chr24:17070624-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 660-1083 |
| Cow position: | chr24:17035793-17035368 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 163, 153 |
| Conread position: | 660-1093 |
| Cow position: | chr24:17077928-17077494 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 127, 116 |
| Conread position: | 661-993 |
| Cow position: | chr24:17013162-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 147, 137 |
| Conread position: | 663-1077 |
| Cow position: | chr24:17036546-17036132 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 186 |
| Conread position: | 675-1075 |
| Cow position: | chr24:17036615-17036218 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 683-1082 |
| Cow position: | chr24:17070479-17070880 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 687-1078 |
| Cow position: | chr24:17078153-17077762 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 126, 136 |
Show alignments to all cow chromosomes.