Cow genome map
| Conread name: | Ss1.1-Mixc-0031,e07.3 |
| Conread position: | 605-1083 |
| Cow position: | chr3:62722209-62721735 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 637-1083 |
| Cow position: | chr3:68045827-68046275 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 642-992 |
| Cow position: | chr3:68027407-68027757 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 642-1039 |
| Cow position: | chr3:68045666-68046061 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 171, 11 |
| Conread position: | 642-1055 |
| Cow position: | chr3:62742593-62743002 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 642-1075 |
| Cow position: | chr3:68027155-68027588 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 186, 196 |
| Conread position: | 642-1083 |
| Cow position: | chr3:68027073-68027514 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 213, 15 |
| Conread position: | 654-1000 |
| Cow position: | chr3:68046012-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 214, 205 |
| Conread position: | 654-1082 |
| Cow position: | chr3:62722250-62721820 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 129, 122 |
| Conread position: | 654-1083 |
| Cow position: | chr3:68045928-68046357 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 112, 118 |
| Conread position: | 655-972 |
| Cow position: | chr3:62742687-62743003 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 186, 61 |
| Conread position: | 660-994 |
| Cow position: | chr3:62721908-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 660-1067 |
| Cow position: | chr3:62742276-62742679 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 78 |
| Conread position: | 662-1077 |
| Cow position: | chr3:62721990-62721575 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 665-1050 |
| Cow position: | chr3:62722323-62721938 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 170, 161 |
| Conread position: | 684-1078 |
| Cow position: | chr3:62743034-62743423 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 82 |
| Conread position: | 685-1073 |
| Cow position: | chr3:62722387-62721998 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 834-1083 |
| Cow position: | chr3:62722322-62722071 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 242, 0 |
Show alignments to all cow chromosomes.