Cow genome map
| Conread name: | Ss1.1-Mixc-0031,e07.3 |
| Conread position: | 637-1015 |
| Cow position: | chr8:46816271-46816649 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 198, 188 |
| Conread position: | 637-1043 |
| Cow position: | chr8:46816943-46817349 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 189, 165 |
| Conread position: | 637-1082 |
| Cow position: | chr8:46816775-46817222 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 638-1067 |
| Cow position: | chr8:48406899-48406470 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 190, 196 |
| Conread position: | 641-954 |
| Cow position: | chr8:55581388-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 185, 172 |
| Conread position: | 641-1082 |
| Cow position: | chr8:45201332-45201775 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 642-1000 |
| Cow position: | chr8:48406643-48406283 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 123 |
| Conread position: | 642-1017 |
| Cow position: | chr8:45201081-45201456 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 642-1017 |
| Cow position: | chr8:46816696-46817071 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 642-1017 |
| Cow position: | chr8:55581053-55581428 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 171, 187 |
| Conread position: | 642-1075 |
| Cow position: | chr8:46816444-46816877 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 642-1076 |
| Cow position: | chr8:48407147-48406713 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 171, 192 |
| Conread position: | 642-1077 |
| Cow position: | chr8:48407483-48407048 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 171, 186 |
| Conread position: | 642-1077 |
| Cow position: | chr8:48407567-48407132 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 157 |
| Conread position: | 642-1082 |
| Cow position: | chr8:46816108-46816550 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 0 |
| Conread position: | 642-1082 |
| Cow position: | chr8:48407231-48406791 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 214, 207 |
| Conread position: | 642-1083 |
| Cow position: | chr8:45201165-45201608 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 642-1083 |
| Cow position: | chr8:46816192-46816635 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 123, 128 |
| Conread position: | 642-1085 |
| Cow position: | chr8:55581221-55581664 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 162, 147 |
| Conread position: | 646-1075 |
| Cow position: | chr8:46816868-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 646-1082 |
| Cow position: | chr8:46816364-46816802 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 123, 119 |
| Conread position: | 646-1083 |
| Cow position: | chr8:48406807-48406368 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 648-1075 |
| Cow position: | chr8:46816030-46816457 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 648-1082 |
| Cow position: | chr8:45201004-45201439 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 654-1082 |
| Cow position: | chr8:45201261-45201691 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 654-1082 |
| Cow position: | chr8:45201429-45201859 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 159 |
| Conread position: | 654-1082 |
| Cow position: | chr8:46816624-46817054 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 655-1082 |
| Cow position: | chr8:48407638-48407209 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 158, 175 |
| Conread position: | 658-1075 |
| Cow position: | chr8:45201517-45201934 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 168, 148 |
| Conread position: | 658-1082 |
| Cow position: | chr8:48407299-48406873 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 660-997 |
| Cow position: | chr8:45201603-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 660-1040 |
| Cow position: | chr8:55580987-55581367 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 660-1083 |
| Cow position: | chr8:55580903-55581328 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 235, 228 |
| Conread position: | 663-1088 |
| Cow position: | chr8:48406706-48406282 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 665-1083 |
| Cow position: | chr8:45200936-45201356 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 674-1082 |
| Cow position: | chr8:55580833-55581243 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 7 |
Show alignments to all cow chromosomes.