Cow genome map

Conread name: Ss1.1-Mixc-0032j22.3

Conread position: 351-614
Cow position: chr1:22394756-22394481 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 105

Conread position: 400-627
Cow position: chr1:52450737-52450967 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 207

Conread position: 412-627
Cow position: chr1:100800786-100800564 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 42

Conread position: 416-636
Cow position: chr1:51968524-51968741 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 178, 0

Conread position: 418-636
Cow position: chr1:49297640-49297866 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 36

Conread position: 422-636
Cow position: chr1:61146110-61146331 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 427-623
Cow position: chr1:39427009-39426816 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 101

Conread position: 427-623
Cow position: chr1:45555362-45555566 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 176

Conread position: 427-625
Cow position: chr1:46143465-46143264 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 36

Conread position: 427-627
Cow position: chr1:72011817-72011617 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 109

Conread position: 427-627
Cow position: chr1:91066155-91065952 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 61

Conread position: 427-628
Cow position: chr1:16061008-16060802 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 427-628
Cow position: chr1:38706858-38706647 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 180

Conread position: 427-629
Cow position: chr1:77739718-77739931 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 427-632
Cow position: chr1:102266272-102266060 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 427-636
Cow position: chr1:79718806-79719022 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 52, 31

Conread position: 428-627
Cow position: chr1:56913533-56913327 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 429-622
Cow position: chr1:42541596-42541791 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 176

Conread position: 429-626
Cow position: chr1:17875709-17875509 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 38

Conread position: 429-627
Cow position: chr1:21787334-21787529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 99

Conread position: 429-627
Cow position: chr1:51394416-51394623 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 429-627
Cow position: chr1:54478327-54478521 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 107

Conread position: 429-627
Cow position: chr1:68863033-68863224 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 429-631
Cow position: chr1:56477590-56477795 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 430-592
Cow position: chr1:15206873-15206704 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 73

Conread position: 430-611
Cow position: chr1:93528698-93528883 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 430-615
Cow position: chr1:11729174-11729365 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 143

Conread position: 430-615
Cow position: chr1:45223580-45223769 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 430-616
Cow position: chr1:53622957-53623148 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 138

Conread position: 430-618
Cow position: chr1:68845485-68845310 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 430-622
Cow position: chr1:15333894-15334088 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 33

Conread position: 430-622
Cow position: chr1:67529054-67529256 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 147

Conread position: 430-623
Cow position: chr1:2462382-2462572 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 33

Conread position: 430-623
Cow position: chr1:6381771-6381977 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 83

Conread position: 430-623
Cow position: chr1:49980709-49980909 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 56

Conread position: 430-623
Cow position: chr1:63079009-63079202 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 53

Conread position: 430-623
Cow position: chr1:67585559-67585752 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 79

Conread position: 430-623
Cow position: chr1:75382980-75383164 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 430-623
Cow position: chr1:82880645-82880832 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 430-623
Cow position: chr1:95835799-95835594 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 430-625
Cow position: chr1:48444195-48443988 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 430-626
Cow position: chr1:81481383-81481182 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 198

Conread position: 430-627
Cow position: chr1:852169-852378 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 430-627
Cow position: chr1:874653-874868 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 6

Conread position: 430-627
Cow position: chr1:3923801-3923599 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 430-627
Cow position: chr1:4444843-4444634 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 430-627
Cow position: chr1:6166246-6166437 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 430-627
Cow position: chr1:7748212-7748421 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 178

Conread position: 430-627
Cow position: chr1:7752378-7752585 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 176

Conread position: 430-627
Cow position: chr1:22192768-22192975 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 430-627
Cow position: chr1:22730733-22730938 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 430-627
Cow position: chr1:22823904-22824114 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 430-627
Cow position: chr1:42398192-42397991 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 430-627
Cow position: chr1:53370084-53370289 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 102, 174

Conread position: 430-627
Cow position: chr1:54156735-54156529 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 51

Conread position: 430-627
Cow position: chr1:55428958-55428748 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 430-627
Cow position: chr1:55753216-55753014 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 124

Conread position: 430-627
Cow position: chr1:59518921-59519116 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 33

Conread position: 430-627
Cow position: chr1:68688582-68688784 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 430-627
Cow position: chr1:70434998-70435191 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 105

Conread position: 430-627
Cow position: chr1:71119520-71119726 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 85

Conread position: 430-627
Cow position: chr1:71748021-71747829 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 85

Conread position: 430-627
Cow position: chr1:72034925-72034723 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 152

Conread position: 430-627
Cow position: chr1:78838795-78838992 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 130

Conread position: 430-627
Cow position: chr1:95152870-95153079 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 430-627
Cow position: chr1:97144465-97144266 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 37

Conread position: 430-627
Cow position: chr1:102648277-102648485 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 430-627
Cow position: chr1:102768180-102768380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 33

Conread position: 430-628
Cow position: chr1:1489402-1489199 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 9

Conread position: 430-628
Cow position: chr1:61884912-61885118 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 430-628
Cow position: chr1:78857330-78857120 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 430-628
Cow position: chr1:88913319-88913526 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 58

Conread position: 430-628
Cow position: chr1:92590196-92590379 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 430-629
Cow position: chr1:100823037-100823247 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 430-630
Cow position: chr1:42482201-42482408 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 73

Conread position: 430-632
Cow position: chr1:38753922-38754127 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 430-634
Cow position: chr1:242556-242765 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 430-634
Cow position: chr1:64572514-64572726 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 430-635
Cow position: chr1:12464665-12464452 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 430-635
Cow position: chr1:35162409-35162618 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 134

Conread position: 430-635
Cow position: chr1:47790663-47790455 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 71

Conread position: 430-635
Cow position: chr1:65318574-65318792 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 430-636
Cow position: chr1:197006-196792 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 430-636
Cow position: chr1:5751312-5751529 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 148

Conread position: 430-636
Cow position: chr1:20871560-20871340 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 430-636
Cow position: chr1:21131118-21130912 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 109

Conread position: 430-636
Cow position: chr1:44506972-44507184 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 430-636
Cow position: chr1:54258566-54258786 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 69

Conread position: 430-636
Cow position: chr1:60044987-60045201 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 36

Conread position: 430-636
Cow position: chr1:81569029-81568812 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 430-636
Cow position: chr1:82936598-82936390 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 176

Conread position: 430-636
Cow position: chr1:101714119-101714330 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 51

Conread position: 430-637
Cow position: chr1:8287631-8287413 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 430-640
Cow position: chr1:84811940-84811720 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 140

Conread position: 430-640
Cow position: chr1:89509922-89509710 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 430-653
Cow position: chr1:43505528-43505755 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 33

Conread position: 430-660
Cow position: chr1:42868937-42868714 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 115, 33

Conread position: 430-664
Cow position: chr1:41027074-41027319 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 431-627
Cow position: chr1:74760935-74761136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 74

Conread position: 432-624
Cow position: chr1:96201314-96201113 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 7

Conread position: 432-627
Cow position: chr1:76739909-76739709 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 156

Conread position: 433-591
Cow position: chr1:31627854-31628007 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 10

Conread position: 433-630
Cow position: chr1:47886478-47886274 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 6, 194

Conread position: 433-634
Cow position: chr1:36998187-36998394 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 433-638
Cow position: chr1:100324747-100324545 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 81

Conread position: 434-590
Cow position: chr1:69694986-69694830 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 6

Conread position: 434-628
Cow position: chr1:102730756-102730549 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 8

Conread position: 434-655
Cow position: chr1:43499290-43499078 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 6

Conread position: 436-627
Cow position: chr1:27793041-27792852 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 55

Conread position: 436-627
Cow position: chr1:70483329-70483130 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 436-628
Cow position: chr1:71946079-71945874 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 169

Conread position: 437-618
Cow position: chr1:23372866-23373057 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 437-623
Cow position: chr1:95049858-95049664 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 100, 167

Conread position: 437-626
Cow position: chr1:43855307-43855493 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 16

Conread position: 437-627
Cow position: chr1:54267931-54267733 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 39

Conread position: 437-627
Cow position: chr1:64302238-64302045 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 30

Conread position: 437-627
Cow position: chr1:66752623-66752427 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 437-628
Cow position: chr1:101634718-101634905 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 95

Conread position: 437-632
Cow position: chr1:99605181-99604981 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 164

Conread position: 437-635
Cow position: chr1:24133054-24132849 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 26

Conread position: 437-636
Cow position: chr1:6731186-6731393 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 437-636
Cow position: chr1:42887271-42887066 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 117

Conread position: 437-636
Cow position: chr1:69539697-69539899 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 437-636
Cow position: chr1:98583758-98583962 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 437-636
Cow position: chr1:101507366-101507564 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 107

Conread position: 437-641
Cow position: chr1:48618238-48618027 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 437-660
Cow position: chr1:30948998-30949221 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 66

Conread position: 438-627
Cow position: chr1:49334385-49334187 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 170

Conread position: 438-627
Cow position: chr1:74956010-74955827 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 438-635
Cow position: chr1:25022068-25021865 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 438-636
Cow position: chr1:15875667-15875873 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 439-592
Cow position: chr1:48581137-48581300 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 439-604
Cow position: chr1:22461230-22461057 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 439-615
Cow position: chr1:6941480-6941659 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 11

Conread position: 439-615
Cow position: chr1:6958893-6959072 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 91, 11

Conread position: 439-618
Cow position: chr1:97717564-97717380 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 71

Conread position: 439-622
Cow position: chr1:32014206-32014391 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 15

Conread position: 439-623
Cow position: chr1:5637051-5636871 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 98

Conread position: 439-623
Cow position: chr1:14567627-14567441 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 439-623
Cow position: chr1:73721368-73721565 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 439-623
Cow position: chr1:86057064-86056877 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 49

Conread position: 439-623
Cow position: chr1:101691888-101692076 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 44

Conread position: 439-624
Cow position: chr1:150917-150722 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 180

Conread position: 439-624
Cow position: chr1:89437706-89437526 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 16

Conread position: 439-625
Cow position: chr1:57089671-57089476 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 80

Conread position: 439-626
Cow position: chr1:76518430-76518629 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 439-627
Cow position: chr1:484459-484258 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 439-627
Cow position: chr1:6760027-6759839 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 97

Conread position: 439-627
Cow position: chr1:7793513-7793329 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 109

Conread position: 439-627
Cow position: chr1:9637037-9637235 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 439-627
Cow position: chr1:10942086-10941893 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 73

Conread position: 439-627
Cow position: chr1:10964300-10964493 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 73

Conread position: 439-627
Cow position: chr1:18936826-18936632 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 26

Conread position: 439-627
Cow position: chr1:20537215-20537407 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 15

Conread position: 439-627
Cow position: chr1:21955365-21955167 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 439-627
Cow position: chr1:26895803-26895607 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 439-627
Cow position: chr1:33846561-33846365 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 439-627
Cow position: chr1:38278020-38277821 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 439-627
Cow position: chr1:62235438-62235251 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 28

Conread position: 439-627
Cow position: chr1:81228326-81228131 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 171

Conread position: 439-627
Cow position: chr1:84104053-84103853 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 439-627
Cow position: chr1:87149807-87149611 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 439-627
Cow position: chr1:96964326-96964524 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 439-628
Cow position: chr1:15547479-15547671 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 38

Conread position: 439-629
Cow position: chr1:34001055-34001250 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 439-630
Cow position: chr1:4691603-4691796 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 28

Conread position: 439-630
Cow position: chr1:29474339-29474144 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 153

Conread position: 439-630
Cow position: chr1:71665924-71665726 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 439-630
Cow position: chr1:71790140-71789940 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 144

Conread position: 439-630
Cow position: chr1:91912348-91912541 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 48

Conread position: 439-630
Cow position: chr1:97536296-97536486 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 112

Conread position: 439-630
Cow position: chr1:99322554-99322362 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 72

Conread position: 439-632
Cow position: chr1:635675-635474 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 15

Conread position: 439-632
Cow position: chr1:41181853-41182046 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 104

Conread position: 439-632
Cow position: chr1:50765620-50765825 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 439-634
Cow position: chr1:16767076-16766874 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 24

Conread position: 439-634
Cow position: chr1:31819119-31819316 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 28

Conread position: 439-634
Cow position: chr1:81473163-81473372 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 439-634
Cow position: chr1:88338675-88338862 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 91

Conread position: 439-635
Cow position: chr1:7442984-7443195 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 439-635
Cow position: chr1:61011189-61011387 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 127

Conread position: 439-635
Cow position: chr1:69411690-69411481 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 159

Conread position: 439-635
Cow position: chr1:73020654-73020449 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 167

Conread position: 439-635
Cow position: chr1:81515241-81515453 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 439-635
Cow position: chr1:100400185-100399994 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 60

Conread position: 439-636
Cow position: chr1:1496524-1496311 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 439-636
Cow position: chr1:17056002-17056205 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 102, 28

Conread position: 439-636
Cow position: chr1:21561020-21561234 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 439-636
Cow position: chr1:21954213-21954013 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 51

Conread position: 439-636
Cow position: chr1:23186790-23186587 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 49

Conread position: 439-636
Cow position: chr1:36688370-36688164 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 89

Conread position: 439-636
Cow position: chr1:47658353-47658562 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 439-636
Cow position: chr1:55229984-55230187 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 439-636
Cow position: chr1:61373731-61373925 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 36

Conread position: 439-636
Cow position: chr1:63994547-63994339 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 168
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 439-636
Cow position: chr1:74084180-74083973 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 32

Conread position: 439-636
Cow position: chr1:81364268-81364479 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 31

Conread position: 439-636
Cow position: chr1:86688146-86687946 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 14

Conread position: 439-637
Cow position: chr1:64804094-64803879 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 439-638
Cow position: chr1:43352646-43352437 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 439-638
Cow position: chr1:82336686-82336887 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 439-655
Cow position: chr1:95618650-95618877 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 439-656
Cow position: chr1:21577817-21578047 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 439-656
Cow position: chr1:98380289-98380059 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 440-561
Cow position: chr1:26616065-26615937 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 440-615
Cow position: chr1:72813627-72813810 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 14

Conread position: 440-623
Cow position: chr1:19031290-19031121 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 440-627
Cow position: chr1:9478609-9478412 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 13

Conread position: 440-627
Cow position: chr1:34159844-34160033 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 125

Conread position: 440-627
Cow position: chr1:72092612-72092418 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 14

Conread position: 440-627
Cow position: chr1:72105419-72105605 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 15

Conread position: 440-627
Cow position: chr1:73534632-73534437 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 174

Conread position: 440-627
Cow position: chr1:78794222-78794031 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 440-627
Cow position: chr1:96365673-96365854 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 128, 27

Conread position: 440-627
Cow position: chr1:98557110-98556913 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 440-627
Cow position: chr1:100551981-100552171 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 99

Conread position: 440-630
Cow position: chr1:15628291-15628487 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 440-630
Cow position: chr1:70227685-70227483 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 440-631
Cow position: chr1:58420214-58420407 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 14

Conread position: 440-632
Cow position: chr1:71350718-71350514 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 440-632
Cow position: chr1:76613126-76612922 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 440-632
Cow position: chr1:81858892-81858691 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 440-635
Cow position: chr1:85622538-85622745 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 440-636
Cow position: chr1:31340762-31340551 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 440-636
Cow position: chr1:31934516-31934718 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 440-636
Cow position: chr1:39684136-39683927 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 75

Conread position: 440-636
Cow position: chr1:50432473-50432266 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 14

Conread position: 440-636
Cow position: chr1:53374444-53374642 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 158

Conread position: 440-636
Cow position: chr1:67919144-67919342 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 92

Conread position: 440-636
Cow position: chr1:70422315-70422516 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 165

Conread position: 440-636
Cow position: chr1:73545902-73545694 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 440-639
Cow position: chr1:19970583-19970376 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 14

Conread position: 441-616
Cow position: chr1:81638558-81638733 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 156

Conread position: 441-624
Cow position: chr1:22944014-22943826 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 26

Conread position: 441-627
Cow position: chr1:4294354-4294550 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 158

Conread position: 441-627
Cow position: chr1:63460888-63461083 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 441-627
Cow position: chr1:102753872-102754055 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 441-629
Cow position: chr1:49759554-49759751 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 12

Conread position: 441-630
Cow position: chr1:31799859-31800057 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 12

Conread position: 441-630
Cow position: chr1:70094353-70094546 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 12

Conread position: 441-631
Cow position: chr1:76740664-76740463 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 12

Conread position: 441-636
Cow position: chr1:14759342-14759140 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 12

Conread position: 441-640
Cow position: chr1:57053216-57053424 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 13

Conread position: 441-641
Cow position: chr1:7229673-7229462 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 12

Conread position: 442-615
Cow position: chr1:81668806-81668619 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 442-623
Cow position: chr1:99609380-99609568 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 35

Conread position: 442-626
Cow position: chr1:51860550-51860360 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 442-627
Cow position: chr1:25383679-25383874 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 442-627
Cow position: chr1:81290518-81290709 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 39

Conread position: 442-632
Cow position: chr1:71636314-71636118 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 96

Conread position: 442-636
Cow position: chr1:6790784-6790988 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 49

Conread position: 442-636
Cow position: chr1:33206870-33206660 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 442-636
Cow position: chr1:68817786-68817586 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 21

Conread position: 442-636
Cow position: chr1:93590575-93590376 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 160

Conread position: 443-627
Cow position: chr1:19599349-19599155 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 12, 125

Conread position: 444-636
Cow position: chr1:85339400-85339591 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 445-615
Cow position: chr1:34856614-34856432 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 445-615
Cow position: chr1:38055487-38055313 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 155

Conread position: 445-623
Cow position: chr1:79663421-79663252 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 445-623
Cow position: chr1:101866483-101866298 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 141

Conread position: 445-627
Cow position: chr1:20667728-20667545 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 90

Conread position: 445-627
Cow position: chr1:32217259-32217443 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 8

Conread position: 445-628
Cow position: chr1:3323882-3324080 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 445-629
Cow position: chr1:40303565-40303755 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 37

Conread position: 445-630
Cow position: chr1:87888403-87888598 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 18

Conread position: 445-636
Cow position: chr1:528058-527869 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 89

Conread position: 445-636
Cow position: chr1:41289763-41289564 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 445-636
Cow position: chr1:51417785-51417979 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 90

Conread position: 445-636
Cow position: chr1:68710295-68710499 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 8

Conread position: 445-636
Cow position: chr1:82337762-82337569 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 18

Conread position: 445-636
Cow position: chr1:94823378-94823175 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 446-615
Cow position: chr1:40181610-40181428 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 446-623
Cow position: chr1:2075337-2075149 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 446-629
Cow position: chr1:84594903-84595098 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 446-635
Cow position: chr1:89835734-89835924 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 179, 0

Conread position: 446-636
Cow position: chr1:52370156-52369969 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 35

Conread position: 446-636
Cow position: chr1:95703820-95704018 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 57

Conread position: 447-627
Cow position: chr1:6394576-6394762 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 6

Conread position: 447-627
Cow position: chr1:41022439-41022621 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 16

Conread position: 447-629
Cow position: chr1:22637404-22637218 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 6

Conread position: 447-632
Cow position: chr1:95100973-95101161 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 5

Conread position: 447-636
Cow position: chr1:46004300-46004488 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 8

Conread position: 448-612
Cow position: chr1:21093137-21093309 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 5

Conread position: 448-615
Cow position: chr1:63905239-63905071 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 5

Conread position: 448-616
Cow position: chr1:3607821-3607989 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 88

Conread position: 448-616
Cow position: chr1:78034885-78034711 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 448-623
Cow position: chr1:62519383-62519567 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 5

Conread position: 448-624
Cow position: chr1:77857687-77857859 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 5

Conread position: 448-627
Cow position: chr1:32035690-32035509 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 5

Conread position: 448-627
Cow position: chr1:42353181-42353349 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 7

Conread position: 448-630
Cow position: chr1:5010816-5010625 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 5

Conread position: 448-630
Cow position: chr1:84141674-84141864 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 5

Conread position: 448-632
Cow position: chr1:5113622-5113809 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 5

Conread position: 448-635
Cow position: chr1:53442092-53441902 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 5

Conread position: 448-636
Cow position: chr1:12222587-12222390 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 5

Conread position: 448-640
Cow position: chr1:76037496-76037294 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 5

Conread position: 449-632
Cow position: chr1:97986431-97986234 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 450-624
Cow position: chr1:78784884-78784699 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 450-630
Cow position: chr1:5423713-5423525 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 450-630
Cow position: chr1:42152457-42152281 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 450-636
Cow position: chr1:35600271-35600076 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 81, 17

Conread position: 451-623
Cow position: chr1:84787293-84787461 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 452-615
Cow position: chr1:77720225-77720067 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 452-626
Cow position: chr1:70044378-70044548 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 453-626
Cow position: chr1:13157215-13157398 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 453-627
Cow position: chr1:4243309-4243125 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 453-627
Cow position: chr1:7739972-7740148 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 18

Conread position: 453-627
Cow position: chr1:37695878-37695698 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 108

Conread position: 453-627
Cow position: chr1:99637230-99637046 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 453-630
Cow position: chr1:74751607-74751420 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 453-630
Cow position: chr1:74929687-74929500 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 453-635
Cow position: chr1:24909022-24908831 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 166

Conread position: 453-636
Cow position: chr1:52139604-52139413 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 140

Conread position: 453-636
Cow position: chr1:65025299-65025475 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 454-627
Cow position: chr1:627991-628173 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 454-634
Cow position: chr1:91937742-91937925 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 33

Conread position: 454-636
Cow position: chr1:5479635-5479444 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 455-619
Cow position: chr1:79631509-79631337 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 26

Conread position: 455-627
Cow position: chr1:1380023-1380206 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 455-627
Cow position: chr1:59551464-59551644 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 8

Conread position: 455-627
Cow position: chr1:69378573-69378393 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 455-627
Cow position: chr1:92187983-92188164 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 117

Conread position: 455-628
Cow position: chr1:65030093-65030276 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 455-629
Cow position: chr1:71228119-71228302 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 24

Conread position: 455-630
Cow position: chr1:74919953-74919767 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 455-632
Cow position: chr1:1802193-1802375 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 163

Conread position: 455-636
Cow position: chr1:14137879-14137691 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 455-636
Cow position: chr1:42175753-42175944 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 455-636
Cow position: chr1:45019775-45019590 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 72

Conread position: 455-636
Cow position: chr1:90267746-90267939 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 455-636
Cow position: chr1:100512923-100513110 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 19

Conread position: 456-605
Cow position: chr1:81471382-81471534 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 45

Conread position: 456-625
Cow position: chr1:70416733-70416557 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 456-627
Cow position: chr1:40077821-40077995 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 136

Conread position: 456-627
Cow position: chr1:94713138-94712958 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 456-629
Cow position: chr1:83677297-83677117 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 457-627
Cow position: chr1:54569726-54569906 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 457-627
Cow position: chr1:79178656-79178836 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 457-627
Cow position: chr1:96304941-96304769 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 83

Conread position: 457-636
Cow position: chr1:22828542-22828358 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 457-636
Cow position: chr1:45099787-45099972 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 457-636
Cow position: chr1:53402809-53402998 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 458-627
Cow position: chr1:87934242-87934075 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 458-636
Cow position: chr1:5431092-5431280 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 11

Conread position: 458-636
Cow position: chr1:47969277-47969455 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 13

Conread position: 460-636
Cow position: chr1:64421572-64421750 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 141

Conread position: 461-627
Cow position: chr1:53474189-53474353 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 7

Conread position: 461-627
Cow position: chr1:71664865-71664689 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 462-634
Cow position: chr1:86503331-86503148 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 130

Conread position: 463-630
Cow position: chr1:26984043-26984220 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 463-632
Cow position: chr1:90879702-90879531 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 155

Conread position: 463-636
Cow position: chr1:43296685-43296503 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 171

Conread position: 465-627
Cow position: chr1:33720137-33720309 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 465-636
Cow position: chr1:89146838-89146658 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 16

Conread position: 468-623
Cow position: chr1:25955934-25956097 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 470-628
Cow position: chr1:64887470-64887303 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 470-629
Cow position: chr1:90840662-90840818 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 470-632
Cow position: chr1:67674562-67674398 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 64

Conread position: 470-636
Cow position: chr1:43379321-43379146 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 95

Conread position: 471-621
Cow position: chr1:96362383-96362239 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 475-613
Cow position: chr1:45505881-45505741 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 475-627
Cow position: chr1:3685640-3685794 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 475-627
Cow position: chr1:42796923-42797081 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 84

Conread position: 475-627
Cow position: chr1:44321552-44321392 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 475-627
Cow position: chr1:75227274-75227120 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 50

Conread position: 475-636
Cow position: chr1:10523746-10523913 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 128

Conread position: 475-636
Cow position: chr1:31806907-31807070 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 124

Conread position: 478-615
Cow position: chr1:99629213-99629355 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 34

Conread position: 478-623
Cow position: chr1:40284590-40284448 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 478-627
Cow position: chr1:69250483-69250637 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 94

Conread position: 478-630
Cow position: chr1:56719389-56719548 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 478-635
Cow position: chr1:69442469-69442302 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 479-627
Cow position: chr1:83972-84116 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 479-636
Cow position: chr1:36887277-36887115 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 479-636
Cow position: chr1:77810709-77810547 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 125

Conread position: 482-628
Cow position: chr1:80423679-80423526 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 482-632
Cow position: chr1:57638913-57638772 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 482-636
Cow position: chr1:62182077-62181925 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 482-636
Cow position: chr1:66445015-66445171 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 116

Conread position: 482-636
Cow position: chr1:90192469-90192635 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 483-632
Cow position: chr1:10470480-10470632 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 484-624
Cow position: chr1:97833762-97833899 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 486-627
Cow position: chr1:4391214-4391063 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 487-638
Cow position: chr1:20202361-20202518 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 95

Conread position: 488-618
Cow position: chr1:67743677-67743542 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 488-636
Cow position: chr1:1915968-1915812 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 107

Conread position: 488-636
Cow position: chr1:3535129-3535284 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 69

Conread position: 488-636
Cow position: chr1:83246484-83246643 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 493-627
Cow position: chr1:45680339-45680473 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 39

Conread position: 494-636
Cow position: chr1:51626724-51626582 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 60

Conread position: 494-636
Cow position: chr1:64705964-64706116 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 498-632
Cow position: chr1:45233060-45233193 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 502-625
Cow position: chr1:8133996-8134128 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 502-634
Cow position: chr1:34952316-34952450 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 24

Conread position: 506-622
Cow position: chr1:80733079-80733195 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 25

Conread position: 506-636
Cow position: chr1:8778258-8778124 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 526-632
Cow position: chr1:47742798-47742904 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 77

Conread position: 532-631
Cow position: chr1:10610562-10610463 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 533-635
Cow position: chr1:95712668-95712770 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 533-636
Cow position: chr1:17443997-17444101 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 534-627
Cow position: chr1:102501001-102500908 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 534-629
Cow position: chr1:25076119-25076023 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 534-630
Cow position: chr1:95513952-95514048 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 534-635
Cow position: chr1:7597612-7597713 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 9

Conread position: 534-635
Cow position: chr1:80312136-80312035 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 536-635
Cow position: chr1:31274873-31274773 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 538-638
Cow position: chr1:22261592-22261692 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-636
Cow position: chr1:95153368-95153459 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 549-629
Cow position: chr1:34767421-34767501 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.