Cow genome map
| Conread name: | Ss1.1-Mixc-0032j22.3 | 
| Conread position: | 406-635 | 
| Cow position: | chr4:42347445-42347686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 408-627 | 
| Cow position: | chr4:34234437-34234654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 52, 30 | 
| Conread position: | 423-623 | 
| Cow position: | chr4:42044992-42044788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 106, 16 | 
| Conread position: | 427-632 | 
| Cow position: | chr4:20124985-20124772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 427-644 | 
| Cow position: | chr4:23509579-23509796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 103, 40 | 
| Conread position: | 427-648 | 
| Cow position: | chr4:11187434-11187666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 9, 13 | 
| Conread position: | 427-654 | 
| Cow position: | chr4:4150037-4150258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 202, 40 | 
| Conread position: | 429-623 | 
| Cow position: | chr4:27276559-27276358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 38, 174 | 
| Conread position: | 429-626 | 
| Cow position: | chr4:961666-961475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 29, 102 | 
| Conread position: | 429-627 | 
| Cow position: | chr4:29291501-29291697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 429-636 | 
| Cow position: | chr4:59871464-59871680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 102, 34 | 
| Conread position: | 430-590 | 
| Cow position: | chr4:53126100-53126260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 99, 37 | 
| Conread position: | 430-600 | 
| Cow position: | chr4:61188883-61188702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 430-616 | 
| Cow position: | chr4:10732209-10732401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 430-622 | 
| Cow position: | chr4:40414642-40414441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 430-623 | 
| Cow position: | chr4:29384246-29384054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 430-623 | 
| Cow position: | chr4:34700044-34699857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 65, 33 | 
| Conread position: | 430-623 | 
| Cow position: | chr4:58248391-58248592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 26, 43 | 
| Conread position: | 430-625 | 
| Cow position: | chr4:46560166-46560368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 30, 76 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:2774699-2774914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:12676789-12676986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 109, 33 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:13344524-13344727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:13918967-13919170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 103, 33 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:27632433-27632632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 97, 37 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:34383355-34383152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 30, 187 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:46136736-46136940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 25, 141 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:66380353-66380145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 430-627 | 
| Cow position: | chr4:67393077-67393286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 430-628 | 
| Cow position: | chr4:51728063-51728266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 430-628 | 
| Cow position: | chr4:59002153-59001946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 430-630 | 
| Cow position: | chr4:12004204-12004410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 102, 33 | 
| Conread position: | 430-630 | 
| Cow position: | chr4:23847063-23846860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 430-632 | 
| Cow position: | chr4:19485283-19485501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 430-632 | 
| Cow position: | chr4:36517493-36517303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 430-636 | 
| Cow position: | chr4:21506970-21506763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 27, 106 | 
| Conread position: | 430-636 | 
| Cow position: | chr4:22546855-22546641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 82 | 
| Conread position: | 430-636 | 
| Cow position: | chr4:37915349-37915134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 430-636 | 
| Cow position: | chr4:56239874-56239664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 30, 171 | 
| Conread position: | 430-636 | 
| Cow position: | chr4:60527166-60527381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 26, 162 | 
| Conread position: | 430-651 | 
| Cow position: | chr4:64029103-64029308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 431-636 | 
| Cow position: | chr4:62472066-62472275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 28, 154 | 
| Conread position: | 431-637 | 
| Cow position: | chr4:54937880-54938082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 432-627 | 
| Cow position: | chr4:51618004-51617805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 19, 25 | 
| Conread position: | 432-636 | 
| Cow position: | chr4:21112580-21112371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 106, 31 | 
| Conread position: | 434-627 | 
| Cow position: | chr4:8083806-8083617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 15, 5 | 
| Conread position: | 434-636 | 
| Cow position: | chr4:42374167-42373955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 436-627 | 
| Cow position: | chr4:30690998-30691193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 13, 18 | 
| Conread position: | 436-627 | 
| Cow position: | chr4:58045641-58045441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 14, 18 | 
| Conread position: | 436-636 | 
| Cow position: | chr4:36876862-36876656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 97, 15 | 
| Conread position: | 437-603 | 
| Cow position: | chr4:3268370-3268203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 105, 97 | 
| Conread position: | 437-617 | 
| Cow position: | chr4:34653876-34653694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 437-625 | 
| Cow position: | chr4:55694171-55694359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 126, 26 | 
| Conread position: | 437-627 | 
| Cow position: | chr4:4084457-4084265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 23, 127 | 
| Conread position: | 437-627 | 
| Cow position: | chr4:45773457-45773657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 17, 7 | 
| Conread position: | 437-630 | 
| Cow position: | chr4:63261466-63261667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 85, 16 | 
| Conread position: | 437-632 | 
| Cow position: | chr4:17186357-17186152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 437-636 | 
| Cow position: | chr4:3283454-3283254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 28, 96 | 
| Conread position: | 437-636 | 
| Cow position: | chr4:33360099-33360293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 437-637 | 
| Cow position: | chr4:21065029-21065228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 18, 89 | 
| Conread position: | 438-636 | 
| Cow position: | chr4:14414349-14414152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 194, 25 | 
| Conread position: | 438-636 | 
| Cow position: | chr4:18974417-18974628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 21, 125 | 
| Conread position: | 438-636 | 
| Cow position: | chr4:47038761-47038969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 21, 135 | 
| Conread position: | 439-614 | 
| Cow position: | chr4:5577216-5577036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 439-615 | 
| Cow position: | chr4:48137943-48138123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 101, 24 | 
| Conread position: | 439-616 | 
| Cow position: | chr4:43740529-43740711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 439-617 | 
| Cow position: | chr4:59785317-59785501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 439-619 | 
| Cow position: | chr4:14512563-14512369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:1015067-1015262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 11, 15 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:7698261-7698456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 20, 50 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:9925634-9925448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 21, 156 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:11610869-11611055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 86, 16 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:15905095-15905297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:19292716-19292905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 20, 96 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:22138227-22138025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:37732488-37732288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:37985727-37985920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 20, 124 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:38946215-38946410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 94, 16 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:45213195-45212995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 20, 148 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:46883676-46883476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:48322028-48322228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:54391021-54390823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 15 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:56410340-56410536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 81 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:58018339-58018533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 10, 15 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:60955326-60955512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 108, 16 | 
| Conread position: | 439-627 | 
| Cow position: | chr4:61608970-61608777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 21, 167 | 
| Conread position: | 439-629 | 
| Cow position: | chr4:32561824-32562026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 439-629 | 
| Cow position: | chr4:43894818-43894616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 26, 55 | 
| Conread position: | 439-630 | 
| Cow position: | chr4:2713863-2713663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 23, 16 | 
| Conread position: | 439-630 | 
| Cow position: | chr4:7964653-7964453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 439-632 | 
| Cow position: | chr4:9444692-9444486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 439-632 | 
| Cow position: | chr4:25197500-25197294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 439-632 | 
| Cow position: | chr4:26959974-26959770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 439-632 | 
| Cow position: | chr4:34310458-34310269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 124, 24 | 
| Conread position: | 439-633 | 
| Cow position: | chr4:63952170-63951967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 94, 14 | 
| Conread position: | 439-635 | 
| Cow position: | chr4:4647394-4647599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 20, 152 | 
| Conread position: | 439-635 | 
| Cow position: | chr4:8770097-8770292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 99, 30 | 
| Conread position: | 439-635 | 
| Cow position: | chr4:27521548-27521759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 21, 38 | 
| Conread position: | 439-635 | 
| Cow position: | chr4:44773048-44772840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:2681328-2681531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 94, 28 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:12245207-12245411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 13, 54 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:16091321-16091117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 21, 42 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:16513531-16513327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 124 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:22713498-22713295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 21, 58 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:25226944-25227136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 35, 28 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:37935290-37935102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 21, 89 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:38822321-38822118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 20, 34 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:41186396-41186204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 19, 88 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:45249965-45250174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 21, 165 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:57566686-57566494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 110, 24 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:59873424-59873626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 439-636 | 
| Cow position: | chr4:66256681-66256879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 17, 159 | 
| Conread position: | 439-638 | 
| Cow position: | chr4:17790297-17790093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 21, 155 | 
| Conread position: | 439-640 | 
| Cow position: | chr4:6094071-6093858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 20, 64 | 
| Conread position: | 439-643 | 
| Cow position: | chr4:5802923-5803125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 21, 50 | 
| Conread position: | 440-604 | 
| Cow position: | chr4:53819690-53819516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 440-623 | 
| Cow position: | chr4:46526997-46527191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 440-625 | 
| Cow position: | chr4:25354521-25354717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 440-625 | 
| Cow position: | chr4:43909765-43909954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 93, 7 | 
| Conread position: | 440-627 | 
| Cow position: | chr4:18756432-18756628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 8, 14 | 
| Conread position: | 440-627 | 
| Cow position: | chr4:44613000-44613196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 440-627 | 
| Cow position: | chr4:45077079-45076888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 9, 14 | 
| Conread position: | 440-627 | 
| Cow position: | chr4:45685455-45685644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 9, 14 | 
| Conread position: | 440-627 | 
| Cow position: | chr4:61969727-61969539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 89, 13 | 
| Conread position: | 440-628 | 
| Cow position: | chr4:36290620-36290814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 440-630 | 
| Cow position: | chr4:6073054-6072857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 98, 23 | 
| Conread position: | 440-632 | 
| Cow position: | chr4:12127643-12127442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 20, 119 | 
| Conread position: | 440-635 | 
| Cow position: | chr4:52779846-52780046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 19, 96 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:348427-348232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 109, 163 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:5790642-5790848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 93, 15 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:7043821-7043617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 93, 13 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:10968391-10968197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 118, 153 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:13142563-13142383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:15871733-15871541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 31, 9 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:23799766-23799551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 93, 8 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:31177820-31178024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 20, 123 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:31594764-31594559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 93, 58 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:34369454-34369264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 20, 103 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:35291018-35291224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 16 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:50687865-50687665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 20, 107 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:54507958-54507766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 9, 14 | 
| Conread position: | 440-636 | 
| Cow position: | chr4:56745989-56746194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 93, 6 | 
| Conread position: | 441-613 | 
| Cow position: | chr4:54171623-54171802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 441-627 | 
| Cow position: | chr4:45874467-45874272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 92, 164 | 
| Conread position: | 441-627 | 
| Cow position: | chr4:53347973-53347790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 15, 38 | 
| Conread position: | 441-636 | 
| Cow position: | chr4:9269890-9269696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 183, 26 | 
| Conread position: | 441-636 | 
| Cow position: | chr4:15439573-15439787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 441-636 | 
| Cow position: | chr4:21088867-21088668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 12 | 
| Conread position: | 442-623 | 
| Cow position: | chr4:11506785-11506602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 23, 142 | 
| Conread position: | 442-623 | 
| Cow position: | chr4:19102884-19102689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 442-623 | 
| Cow position: | chr4:32601835-32602013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 442-627 | 
| Cow position: | chr4:12591216-12591029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 35 | 
| Conread position: | 442-627 | 
| Cow position: | chr4:30769033-30769223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 13, 61 | 
| Conread position: | 442-627 | 
| Cow position: | chr4:59015590-59015771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 107, 21 | 
| Conread position: | 443-627 | 
| Cow position: | chr4:20164695-20164506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 5, 67 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:12867106-12867292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 13, 42 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:13668621-13668427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:19199286-19199092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:32458860-32458665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:40995732-40995925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 14, 28 | 
| Conread position: | 445-627 | 
| Cow position: | chr4:68159457-68159272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 100 | 
| Conread position: | 445-634 | 
| Cow position: | chr4:62370317-62370502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 104 | 
| Conread position: | 445-636 | 
| Cow position: | chr4:39007508-39007697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 100, 22 | 
| Conread position: | 445-636 | 
| Cow position: | chr4:47230997-47230796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 9, 159 | 
| Conread position: | 445-636 | 
| Cow position: | chr4:47284012-47283811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 9, 159 | 
| Conread position: | 446-616 | 
| Cow position: | chr4:23646852-23646690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 446-623 | 
| Cow position: | chr4:19316003-19315820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 84, 21 | 
| Conread position: | 446-627 | 
| Cow position: | chr4:56236550-56236363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 13, 136 | 
| Conread position: | 446-629 | 
| Cow position: | chr4:45483803-45483997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 86, 9 | 
| Conread position: | 447-624 | 
| Cow position: | chr4:22101259-22101073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 86, 6 | 
| Conread position: | 447-627 | 
| Cow position: | chr4:46656135-46656325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 86, 6 | 
| Conread position: | 447-636 | 
| Cow position: | chr4:46668982-46669185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 82, 6 | 
| Conread position: | 447-651 | 
| Cow position: | chr4:69223126-69223341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 7, 56 | 
| Conread position: | 448-606 | 
| Cow position: | chr4:17987815-17987978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 88, 5 | 
| Conread position: | 448-623 | 
| Cow position: | chr4:22849485-22849315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 11, 7 | 
| Conread position: | 448-623 | 
| Cow position: | chr4:34722880-34722697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 85, 5 | 
| Conread position: | 448-627 | 
| Cow position: | chr4:12030853-12031040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 84, 5 | 
| Conread position: | 448-627 | 
| Cow position: | chr4:32693794-32693979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 7 | 
| Conread position: | 448-627 | 
| Cow position: | chr4:49019679-49019507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 448-627 | 
| Cow position: | chr4:66509642-66509817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 25, 87 | 
| Conread position: | 448-628 | 
| Cow position: | chr4:49880689-49880513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 448-636 | 
| Cow position: | chr4:19349484-19349667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 12, 66 | 
| Conread position: | 448-636 | 
| Cow position: | chr4:23757775-23757974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 88, 5 | 
| Conread position: | 448-636 | 
| Cow position: | chr4:26333189-26332998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 93, 5 | 
| Conread position: | 448-636 | 
| Cow position: | chr4:26335356-26335165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 94, 5 | 
| Conread position: | 449-612 | 
| Cow position: | chr4:39091895-39092060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 101, 14 | 
| Conread position: | 449-665 | 
| Cow position: | chr4:8675378-8675596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 89, 14 | 
| Conread position: | 450-632 | 
| Cow position: | chr4:21128142-21128319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 94 | 
| Conread position: | 450-634 | 
| Cow position: | chr4:22482330-22482516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 23, 79 | 
| Conread position: | 450-634 | 
| Cow position: | chr4:52748448-52748264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 92, 18 | 
| Conread position: | 451-623 | 
| Cow position: | chr4:43579405-43579229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 13, 155 | 
| Conread position: | 451-642 | 
| Cow position: | chr4:68590781-68590976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 79, 6 | 
| Conread position: | 452-635 | 
| Cow position: | chr4:29842836-29843021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 97, 81 | 
| Conread position: | 452-636 | 
| Cow position: | chr4:49094280-49094101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 77, 59 | 
| Conread position: | 453-620 | 
| Cow position: | chr4:33100799-33100623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 72, 130 | 
| Conread position: | 453-628 | 
| Cow position: | chr4:24371849-24371667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 80, 157 | 
| Conread position: | 453-630 | 
| Cow position: | chr4:35578926-35578739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 453-631 | 
| Cow position: | chr4:36709031-36709219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 79, 182 | 
| Conread position: | 453-632 | 
| Cow position: | chr4:45588420-45588235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 83, 113 | 
| Conread position: | 453-635 | 
| Cow position: | chr4:30974347-30974533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 77, 24 | 
| Conread position: | 453-635 | 
| Cow position: | chr4:62317456-62317646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 80, 149 | 
| Conread position: | 453-636 | 
| Cow position: | chr4:16118719-16118527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 80, 141 | 
| Conread position: | 453-636 | 
| Cow position: | chr4:59055850-59055671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 454-627 | 
| Cow position: | chr4:45840410-45840583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 455-625 | 
| Cow position: | chr4:19708952-19709132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:19542949-19543134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:34919258-34919083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 11, 46 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:39010062-39010244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 75, 171 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:61391214-61391044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 13, 25 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:65108544-65108722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 50, 87 | 
| Conread position: | 455-627 | 
| Cow position: | chr4:66547755-66547572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 455-628 | 
| Cow position: | chr4:52823389-52823210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 455-630 | 
| Cow position: | chr4:50718802-50718985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 75, 34 | 
| Conread position: | 455-631 | 
| Cow position: | chr4:51083325-51083145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 455-632 | 
| Cow position: | chr4:3853488-3853676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 455-632 | 
| Cow position: | chr4:66168320-66168142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 455-636 | 
| Cow position: | chr4:3299777-3299597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 95, 16 | 
| Conread position: | 455-636 | 
| Cow position: | chr4:5250200-5250391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 455-636 | 
| Cow position: | chr4:25802703-25802894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 456-627 | 
| Cow position: | chr4:14063270-14063105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 456-636 | 
| Cow position: | chr4:8352552-8352362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 456-636 | 
| Cow position: | chr4:11185977-11186167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 456-682 | 
| Cow position: | chr4:22259195-22258990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 216, 15 | 
| Conread position: | 457-627 | 
| Cow position: | chr4:11222149-11222314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 457-627 | 
| Cow position: | chr4:47262549-47262728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 457-629 | 
| Cow position: | chr4:23271297-23271477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 76, 118 | 
| Conread position: | 458-626 | 
| Cow position: | chr4:30574485-30574651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 77, 8 | 
| Conread position: | 459-628 | 
| Cow position: | chr4:30943971-30944146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 459-636 | 
| Cow position: | chr4:28660534-28660346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 460-627 | 
| Cow position: | chr4:60302986-60302824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 460-636 | 
| Cow position: | chr4:2770091-2770272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 460-636 | 
| Cow position: | chr4:61214828-61214656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 89, 28 | 
| Conread position: | 461-627 | 
| Cow position: | chr4:44681233-44681069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 461-627 | 
| Cow position: | chr4:65825808-65825633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 461-635 | 
| Cow position: | chr4:69458219-69458395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 69, 140 | 
| Conread position: | 463-628 | 
| Cow position: | chr4:40392836-40393003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 82, 71 | 
| Conread position: | 463-632 | 
| Cow position: | chr4:46235139-46234966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 464-627 | 
| Cow position: | chr4:65291834-65291672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 129, 80 | 
| Conread position: | 464-636 | 
| Cow position: | chr4:65463488-65463313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 13, 68 | 
| Conread position: | 466-635 | 
| Cow position: | chr4:50837725-50837904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 467-623 | 
| Cow position: | chr4:28854250-28854089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 63, 147 | 
| Conread position: | 470-636 | 
| Cow position: | chr4:14131454-14131625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 18, 153 | 
| Conread position: | 471-623 | 
| Cow position: | chr4:48693627-48693782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 471-636 | 
| Cow position: | chr4:27657005-27657172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 475-623 | 
| Cow position: | chr4:66412219-66412370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 475-627 | 
| Cow position: | chr4:12052296-12052146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 79, 26 | 
| Conread position: | 475-627 | 
| Cow position: | chr4:23943612-23943452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 475-627 | 
| Cow position: | chr4:49794692-49794841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 475-632 | 
| Cow position: | chr4:46494336-46494497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 63, 124 | 
| Conread position: | 475-636 | 
| Cow position: | chr4:56755887-56756058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 475-638 | 
| Cow position: | chr4:61451246-61451419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 165 | 
| Conread position: | 477-636 | 
| Cow position: | chr4:537731-537569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 478-618 | 
| Cow position: | chr4:4320955-4320811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 64, 56 | 
| Conread position: | 478-622 | 
| Cow position: | chr4:27691637-27691484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 55, 30 | 
| Conread position: | 478-627 | 
| Cow position: | chr4:61999162-61999007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 478-630 | 
| Cow position: | chr4:45801551-45801713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 479-635 | 
| Cow position: | chr4:12908410-12908568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 479-636 | 
| Cow position: | chr4:48409232-48409085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 479-639 | 
| Cow position: | chr4:20153512-20153352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 61, 115 | 
| Conread position: | 481-627 | 
| Cow position: | chr4:2537318-2537460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 483-636 | 
| Cow position: | chr4:54315185-54315020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 485-635 | 
| Cow position: | chr4:30935321-30935158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 486-635 | 
| Cow position: | chr4:69478283-69478427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 488-636 | 
| Cow position: | chr4:35939688-35939542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 501-636 | 
| Cow position: | chr4:9805940-9805806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 52, 94 | 
| Conread position: | 532-627 | 
| Cow position: | chr4:45629947-45629853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 532-629 | 
| Cow position: | chr4:47035625-47035527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 532-636 | 
| Cow position: | chr4:23809706-23809601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 534-623 | 
| Cow position: | chr4:44024442-44024352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 91 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 534-623 | 
| Cow position: | chr4:47451576-47451665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 90 | 
| Alignm identity: | 77 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 534-632 | 
| Cow position: | chr4:33273247-33273149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 534-636 | 
| Cow position: | chr4:43436364-43436466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 534-636 | 
| Cow position: | chr4:64336180-64336078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 535-644 | 
| Cow position: | chr4:7816400-7816512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 541-636 | 
| Cow position: | chr4:5904615-5904710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
