Cow genome map

Conread name: Ss1.1-Mixc-0034g09.3

Conread position: 121-272
Cow position: chr2:73193145-73193295 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 44

Conread position: 130-271
Cow position: chr2:57335233-57335374 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 24

Conread position: 130-277
Cow position: chr2:25030443-25030296 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 24

Conread position: 131-277
Cow position: chr2:15576796-15576653 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 21, 35

Conread position: 137-272
Cow position: chr2:198737-198607 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 151-277
Cow position: chr2:57588755-57588880 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 151-277
Cow position: chr2:80292888-80292768 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 152-271
Cow position: chr2:10611571-10611452 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 12

Conread position: 152-272
Cow position: chr2:41657235-41657354 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 152-272
Cow position: chr2:44934856-44934740 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 152-272
Cow position: chr2:47603185-47603067 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 152-273
Cow position: chr2:42670926-42670809 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 152-274
Cow position: chr2:8118603-8118722 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:212162-212041 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:282626-282502 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:364999-364875 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:2088113-2087989 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:2381167-2381288 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:2412736-2412612 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:4403097-4402975 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:5474576-5474700 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:9907973-9908097 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:10186169-10186045 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:10268594-10268475 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:11159060-11158935 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 13

Conread position: 152-277
Cow position: chr2:13045639-13045520 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:16900316-16900436 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:19011407-19011530 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:26921736-26921857 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:32066018-32065897 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:36980442-36980565 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:41686569-41686693 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:47038354-47038230 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:49472307-49472431 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:50077664-50077784 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:53329821-53329945 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:54485663-54485539 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:59413621-59413497 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 152-277
Cow position: chr2:78742633-78742753 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 152-277
Cow position: chr2:80955576-80955455 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 155-270
Cow position: chr2:51990186-51990072 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 155-272
Cow position: chr2:11729927-11730042 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 155-272
Cow position: chr2:49590464-49590580 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 155-277
Cow position: chr2:12480004-12479883 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 155-277
Cow position: chr2:22077847-22077968 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 155-277
Cow position: chr2:28619967-28619848 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 156-277
Cow position: chr2:3324496-3324376 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 157-277
Cow position: chr2:740908-740786 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 164-272
Cow position: chr2:31297868-31297976 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 96
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 164-272
Cow position: chr2:52616541-52616648 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 167-272
Cow position: chr2:72597681-72597785 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 172-272
Cow position: chr2:36030279-36030179 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 261-521
Cow position: chr2:6877039-6877301 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 66

Conread position: 323-520
Cow position: chr2:7900649-7900844 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 327-529
Cow position: chr2:44992670-44992470 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 352-529
Cow position: chr2:14559788-14559963 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.