Cow genome map


           Conread name:
           Ss1.1-Mixc-0034g09.3
        

               Conread position:
               128-277
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               130-252
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               130-270
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               137-273
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               138-280
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               151-277
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               151-277
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               152-259
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-269
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-269
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-270
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-270
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               152-271
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-271
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               152-271
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               152-272
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-272
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-272
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-272
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-273
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-274
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-279
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               155-273
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               155-277
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               155-277
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               156-270
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               156-277
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               162-277
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               163-272
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-277
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-277
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-271
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               167-277
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-277
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               168-277
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-273
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-277
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-277
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               172-277
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               181-273
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-526
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               321-520
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               321-526
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               321-529
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               322-529
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.