Cow genome map
| Conread name: | Ss1.1-Mixc-0034g09.3 |
| Conread position: | 151-277 |
| Cow position: | chr4:5880417-5880543 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 151-277 |
| Cow position: | chr4:18517152-18517276 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 151-277 |
| Cow position: | chr4:41954726-41954848 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 151-277 |
| Cow position: | chr4:41958381-41958503 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 152-268 |
| Cow position: | chr4:41120576-41120691 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-272 |
| Cow position: | chr4:529653-529772 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-272 |
| Cow position: | chr4:18424271-18424153 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:100680-100556 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:159409-159531 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:603273-603392 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:1930371-1930250 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:4416328-4416452 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:13493572-13493696 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:13548282-13548406 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:16056854-16056977 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:16326521-16326397 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:17925994-17925869 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 152-277 |
| Cow position: | chr4:25599242-25599118 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:27333962-27334086 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:29531621-29531502 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:31565047-31564926 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:31669532-31669653 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:32212421-32212545 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:33072567-33072443 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:36896628-36896750 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:41332967-41333090 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:44725344-44725468 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:46664776-46664899 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-277 |
| Cow position: | chr4:48026658-48026780 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 152-277 |
| Cow position: | chr4:57984241-57984365 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 155-277 |
| Cow position: | chr4:6490103-6489985 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 155-277 |
| Cow position: | chr4:12587594-12587715 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 162-272 |
| Cow position: | chr4:27301202-27301096 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 164-277 |
| Cow position: | chr4:26886590-26886477 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-277 |
| Cow position: | chr4:45049027-45048914 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-272 |
| Cow position: | chr4:17093597-17093493 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 169-277 |
| Cow position: | chr4:43319370-43319262 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.