Cow genome map
| Conread name: | Ss1.1-Mixc-0036l10.5 |
| Conread position: | 3-122 |
| Cow position: | chr23:23650412-23650293 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-122 |
| Cow position: | chr23:23582352-23582470 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-273 |
| Cow position: | chr23:23584098-23584190 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-273 |
| Cow position: | chr23:23648707-23648615 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-464 |
| Cow position: | chr23:23584271-23584458 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-464 |
| Cow position: | chr23:23648535-23648348 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-445 |
| Cow position: | chr23:23636011-23636176 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 463-557 |
| Cow position: | chr23:23584593-23584687 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-557 |
| Cow position: | chr23:23648213-23648119 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-557 |
| Cow position: | chr23:23636239-23636321 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-631 |
| Cow position: | chr23:23584823-23584901 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-631 |
| Cow position: | chr23:23636457-23636535 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-631 |
| Cow position: | chr23:23647983-23647905 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-730 |
| Cow position: | chr23:23586260-23586361 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-730 |
| Cow position: | chr23:23637954-23638055 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-730 |
| Cow position: | chr23:23646546-23646445 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 732-823 |
| Cow position: | chr23:23586499-23586590 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 732-823 |
| Cow position: | chr23:23646307-23646216 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 822-919 |
| Cow position: | chr23:23646135-23646038 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 822-921 |
| Cow position: | chr23:23586671-23586770 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1010 |
| Cow position: | chr23:23586954-23587041 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1010 |
| Cow position: | chr23:23645851-23645764 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1008-1138 |
| Cow position: | chr23:23587322-23587452 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1008-1138 |
| Cow position: | chr23:23645483-23645353 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1139-1388 |
| Cow position: | chr23:23645211-23644947 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 146 |
| Conread position: | 1139-1389 |
| Cow position: | chr23:23587594-23587859 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 146 |
Show alignments to all cow chromosomes.