Cow genome map
| Conread name: | Ss1.1-Mixc-0037,b17.5 |
| Conread position: | 1-333 |
| Cow position: | chr21:12608260-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 289, 308 |
| Conread position: | 6-462 |
| Cow position: | chr21:12608423-12607967 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 9-333 |
| Cow position: | chr21:12659678-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 208 |
| Conread position: | 9-462 |
| Cow position: | chr21:12659510-12659963 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-630 |
| Cow position: | chr21:12608588-12607967 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 466 |
| Conread position: | 9-837 |
| Cow position: | chr21:12659006-12659834 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 578, 591 |
| Conread position: | 10-588 |
| Cow position: | chr21:12659428-12660005 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 9 |
| Conread position: | 10-837 |
| Cow position: | chr21:12608754-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 9 |
| Conread position: | 14-844 |
| Cow position: | chr21:12658927-12659757 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 203 |
| Conread position: | 27-419 |
| Cow position: | chr21:34222944-34222552 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 288, 293 |
| Conread position: | 27-631 |
| Cow position: | chr21:12659360-12659964 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 202 |
| Conread position: | 28-512 |
| Cow position: | chr21:34223027-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 287, 292 |
| Conread position: | 28-837 |
| Cow position: | chr21:12608821-12608012 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 89 |
| Conread position: | 28-837 |
| Cow position: | chr21:12608905-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 281 |
| Conread position: | 28-837 |
| Cow position: | chr21:12659193-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 369 |
| Conread position: | 28-841 |
| Cow position: | chr21:12659109-12659922 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 188 |
| Conread position: | 28-844 |
| Cow position: | chr21:12658857-12659673 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 189 |
| Conread position: | 34-557 |
| Cow position: | chr21:34223102-34222582 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 58-844 |
| Cow position: | chr21:12658803-12659589 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 339 |
| Conread position: | 84-677 |
| Cow position: | chr21:34223136-34222544 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 166-741 |
| Cow position: | chr21:11852253-11852827 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 351, 7 |
| Conread position: | 217-844 |
| Cow position: | chr21:12608884-12608257 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 242 |
| Conread position: | 280-841 |
| Cow position: | chr21:12608905-12608344 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 320 |
| Conread position: | 361-850 |
| Cow position: | chr21:12608908-12608419 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 226, 247 |
Show alignments to all cow chromosomes.