Cow genome map
| Conread name: | Ss1.1-Mixc-0037,b17.5 |
| Conread position: | 10-817 |
| Cow position: | chr22:12399836-12399030 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 451 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 18-333 |
| Cow position: | chr22:12418760-12418445 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-452 |
| Cow position: | chr22:12418919-12418494 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 364, 377 |
| Conread position: | 28-294 |
| Cow position: | chr22:11701378-11701644 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 184, 196 |
| Conread position: | 28-432 |
| Cow position: | chr22:11641051-11641455 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-468 |
| Cow position: | chr22:11701126-11701566 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 177, 189 |
| Conread position: | 28-605 |
| Cow position: | chr22:12419002-12418425 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 201 |
| Conread position: | 28-713 |
| Cow position: | chr22:12431715-12431030 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 386 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 376, 371 |
| Conread position: | 28-807 |
| Cow position: | chr22:12432219-12431440 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 435 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 559, 572 |
| Conread position: | 28-827 |
| Cow position: | chr22:12499063-12499862 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 463 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 220, 214 |
| Conread position: | 28-828 |
| Cow position: | chr22:12399567-12398767 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 464 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 28-836 |
| Cow position: | chr22:12476280-12475472 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 456 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 304, 298 |
| Conread position: | 28-836 |
| Cow position: | chr22:12498979-12499787 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 462 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 260, 274 |
| Conread position: | 52-480 |
| Cow position: | chr22:12385366-12384937 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 101 |
| Conread position: | 53-348 |
| Cow position: | chr22:11666665-11666960 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 57-418 |
| Cow position: | chr22:12399118-12398757 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-545 |
| Cow position: | chr22:12431518-12431030 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 57-553 |
| Cow position: | chr22:11640828-11641324 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-837 |
| Cow position: | chr22:12431854-12431074 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 430 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 433, 442 |
| Conread position: | 58-566 |
| Cow position: | chr22:12385445-12384935 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 58-685 |
| Cow position: | chr22:12475914-12475287 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 357 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 479, 486 |
| Conread position: | 58-685 |
| Cow position: | chr22:12499345-12499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 92 |
| Conread position: | 63-828 |
| Cow position: | chr22:11640666-11641431 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 64-803 |
| Cow position: | chr22:12399699-12398960 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 422 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 487, 477 |
| Conread position: | 85-553 |
| Cow position: | chr22:11701099-11701567 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 151, 142 |
| Conread position: | 96-669 |
| Cow position: | chr22:12419018-12418445 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 352 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 308, 301 |
| Conread position: | 97-830 |
| Cow position: | chr22:11640616-11641349 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 423 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 490, 503 |
| Conread position: | 118-481 |
| Cow position: | chr22:12458577-12458214 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 353, 339 |
| Conread position: | 196-762 |
| Cow position: | chr22:11701126-11701692 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 202, 208 |
| Conread position: | 199-836 |
| Cow position: | chr22:12419267-12418614 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 179, 16 |
| Conread position: | 217-762 |
| Cow position: | chr22:12418981-12418436 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 187, 180 |
| Conread position: | 224-837 |
| Cow position: | chr22:11640659-11641272 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 367 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 28 |
Show alignments to all cow chromosomes.