Cow genome map


           Conread name:
           Ss1.1-Mixc-0037,b17.5
        

               Conread position:
               10-837
               

               Cow position:
               chr24:17078339-17077512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               831
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               425, 430
               

               Conread position:
               27-557
               

               Cow position:
               chr24:17070482-17071012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               361, 356
               

               Conread position:
               28-694
               

               Cow position:
               chr24:17035682-17035016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               667
               

               Alignm identity:
               380
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-754
               

               Cow position:
               chr24:17078237-17077511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               730
               

               Alignm identity:
               391
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               435, 429
               

               Conread position:
               28-791
               

               Cow position:
               chr24:17036354-17035591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               768
               

               Alignm identity:
               447
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               437, 429
               

               Conread position:
               34-837
               

               Cow position:
               chr24:17036432-17035629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               806
               

               Alignm identity:
               463
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               165, 181
               

               Conread position:
               50-818
               

               Cow position:
               chr24:17036500-17035732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               771
               

               Alignm identity:
               442
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               469, 474
               

               Conread position:
               88-836
               

               Cow position:
               chr24:17078345-17077597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               401
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               373, 369
               

               Conread position:
               91-395
               

               Cow position:
               chr24:17070462-17070766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               286, 279
               

               Conread position:
               165-837
               

               Cow position:
               chr24:17036552-17035881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               676
               

               Alignm identity:
               388
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               270, 7
               
Show alignments to all cow chromosomes.