Cow genome map
| Conread name: | Ss1.1-Mixc-0037,b17.5 |
| Conread position: | 1-178 |
| Cow position: | chr3:20194527-20194706 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1-324 |
| Cow position: | chr3:20194971-20195294 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-566 |
| Cow position: | chr3:20194724-20195284 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 223 |
| Conread position: | 9-258 |
| Cow position: | chr3:63430880-63431129 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 223, 200 |
| Conread position: | 9-417 |
| Cow position: | chr3:20194895-20195303 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 388, 395 |
| Conread position: | 18-798 |
| Cow position: | chr3:20194460-20195264 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 481 |
| Conread position: | 32-482 |
| Cow position: | chr3:62722046-62721595 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 271 |
| Conread position: | 32-557 |
| Cow position: | chr3:62722130-62721604 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 409 |
| Conread position: | 33-340 |
| Cow position: | chr3:20194391-20194697 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 85-334 |
| Cow position: | chr3:63430872-63431121 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-334 |
| Cow position: | chr3:63475852-63476102 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 167-425 |
| Cow position: | chr3:20194441-20194700 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 196-743 |
| Cow position: | chr3:20194746-20195293 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 279 |
| Conread position: | 315-837 |
| Cow position: | chr3:20194695-20195219 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 287 |
| Conread position: | 339-850 |
| Cow position: | chr3:20194445-20194980 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 161 |
| Conread position: | 423-844 |
| Cow position: | chr3:20194721-20195142 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 505-766 |
| Cow position: | chr3:20194443-20194706 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 95 |
| Conread position: | 542-851 |
| Cow position: | chr3:20194396-20194704 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 28 |
Show alignments to all cow chromosomes.