Cow genome map
| Conread name: | Ss1.1-Mixc-0037,b17.5 |
| Conread position: | 1-418 |
| Cow position: | chrX:14181393-14180976 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 266 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-451 |
| Cow position: | chrX:13826610-13826165 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 206, 215 |
| Conread position: | 9-378 |
| Cow position: | chrX:13826523-13826154 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 203, 216 |
| Conread position: | 9-546 |
| Cow position: | chrX:25324994-25324457 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 395, 391 |
| Conread position: | 27-369 |
| Cow position: | chrX:14181283-14180941 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 312, 327 |
| Conread position: | 28-585 |
| Cow position: | chrX:13826756-13826199 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 28-762 |
| Cow position: | chrX:14181618-14180884 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 427 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 446, 451 |
| Conread position: | 28-787 |
| Cow position: | chrX:13826924-13826165 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 57-564 |
| Cow position: | chrX:14181505-14180998 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 342 |
| Conread position: | 62-488 |
| Cow position: | chrX:14181416-14180990 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 66-546 |
| Cow position: | chrX:25325105-25324625 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 155 |
| Conread position: | 79-455 |
| Cow position: | chrX:25309713-25310089 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-758 |
| Cow position: | chrX:14181639-14180972 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 400 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 301, 291 |
| Conread position: | 172-828 |
| Cow position: | chrX:13826948-13826292 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 128 |
| Conread position: | 235-837 |
| Cow position: | chrX:14181579-14180977 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 229 |
| Conread position: | 309-836 |
| Cow position: | chrX:14181589-14181062 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 93 |
| Conread position: | 331-837 |
| Cow position: | chrX:13826958-13826451 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 425-837 |
| Cow position: | chrX:13826947-13826535 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 580-850 |
| Cow position: | chrX:14181400-14181132 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.