Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 434-708 |
| Cow position: | chr10:19704717-19704438 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 448-664 |
| Cow position: | chr10:26620743-26620524 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 448-667 |
| Cow position: | chr10:68979383-68979607 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 448-678 |
| Cow position: | chr10:41985079-41984841 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 448-712 |
| Cow position: | chr10:22843490-22843765 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 448-715 |
| Cow position: | chr10:65072305-65072035 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 448-726 |
| Cow position: | chr10:11275474-11275745 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 448-732 |
| Cow position: | chr10:1351744-1352033 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 172 |
| Conread position: | 448-732 |
| Cow position: | chr10:41637458-41637748 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 449-684 |
| Cow position: | chr10:31855137-31855388 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 449-685 |
| Cow position: | chr10:49771797-49772027 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 449-685 |
| Cow position: | chr10:60910172-60909943 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 449-696 |
| Cow position: | chr10:25257396-25257653 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 449-712 |
| Cow position: | chr10:4994753-4994486 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 449-726 |
| Cow position: | chr10:57405130-57404839 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 449-732 |
| Cow position: | chr10:24077849-24077543 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 148 |
| Conread position: | 451-726 |
| Cow position: | chr10:31219828-31220090 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 460-730 |
| Cow position: | chr10:48313237-48312975 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 462-685 |
| Cow position: | chr10:28103997-28103772 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 86 |
| Conread position: | 462-711 |
| Cow position: | chr10:58262845-58263088 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 476-711 |
| Cow position: | chr10:68204260-68204019 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 201 |
| Conread position: | 498-717 |
| Cow position: | chr10:52815094-52815323 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 501-710 |
| Cow position: | chr10:22905899-22905686 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 501-732 |
| Cow position: | chr10:12875937-12875714 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 509-727 |
| Cow position: | chr10:28949946-28950163 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 528-732 |
| Cow position: | chr10:22455087-22455290 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 546-688 |
| Cow position: | chr10:36303938-36303791 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 568-711 |
| Cow position: | chr10:15618838-15618694 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 580-712 |
| Cow position: | chr10:28566301-28566169 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 589-731 |
| Cow position: | chr10:48193724-48193580 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.