Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 444-732 |
| Cow position: | chr12:16961388-16961685 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 219 |
| Conread position: | 448-704 |
| Cow position: | chr12:45555627-45555368 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 448-711 |
| Cow position: | chr12:29842571-29842822 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 448-726 |
| Cow position: | chr12:22473753-22474048 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 448-732 |
| Cow position: | chr12:12983078-12982779 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 452-732 |
| Cow position: | chr12:10162157-10161876 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 454-711 |
| Cow position: | chr12:27938708-27938990 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 457-692 |
| Cow position: | chr12:48211073-48210856 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 457-727 |
| Cow position: | chr12:8096980-8096711 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 458-685 |
| Cow position: | chr12:21064978-21064742 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 458-731 |
| Cow position: | chr12:18544444-18544717 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 474-708 |
| Cow position: | chr12:21066022-21066258 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 476-732 |
| Cow position: | chr12:29494835-29494578 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 141 |
| Conread position: | 481-731 |
| Cow position: | chr12:16327323-16327580 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 500-721 |
| Cow position: | chr12:1993725-1993508 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 501-731 |
| Cow position: | chr12:12711377-12711137 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 544-732 |
| Cow position: | chr12:23892425-23892611 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 571-711 |
| Cow position: | chr12:11306665-11306525 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-712 |
| Cow position: | chr12:33277844-33277971 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 581-732 |
| Cow position: | chr12:29760706-29760553 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 0 |
Show alignments to all cow chromosomes.