Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 444-726 |
| Cow position: | chr14:37983166-37983481 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 448-658 |
| Cow position: | chr14:37138118-37138338 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 178 |
| Conread position: | 448-658 |
| Cow position: | chr14:47936073-47935868 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 448-699 |
| Cow position: | chr14:37678788-37679051 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 173 |
| Conread position: | 448-722 |
| Cow position: | chr14:25362558-25362273 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 448-722 |
| Cow position: | chr14:28007819-28007541 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 237 |
| Conread position: | 448-725 |
| Cow position: | chr14:10156903-10156622 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 448-726 |
| Cow position: | chr14:39807248-39807535 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 26, 138 |
| Conread position: | 448-726 |
| Cow position: | chr14:40721714-40721999 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 448-730 |
| Cow position: | chr14:23729516-23729794 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 448-730 |
| Cow position: | chr14:35936299-35936576 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 448-731 |
| Cow position: | chr14:3588234-3588522 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 448-731 |
| Cow position: | chr14:23527147-23526857 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 448-732 |
| Cow position: | chr14:9255087-9255388 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 12, 255 |
| Conread position: | 448-732 |
| Cow position: | chr14:14834915-14835218 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 448-732 |
| Cow position: | chr14:39616699-39616977 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 448-732 |
| Cow position: | chr14:45018282-45018581 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 449-705 |
| Cow position: | chr14:35605099-35605365 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 449-711 |
| Cow position: | chr14:27988863-27988595 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 198 |
| Conread position: | 449-712 |
| Cow position: | chr14:23230942-23231197 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 449-715 |
| Cow position: | chr14:47043669-47043931 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 449-718 |
| Cow position: | chr14:12643539-12643824 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 213 |
| Conread position: | 449-732 |
| Cow position: | chr14:18984692-18984977 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 450-732 |
| Cow position: | chr14:3437204-3436906 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 451-638 |
| Cow position: | chr14:34777369-34777570 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 157 |
| Conread position: | 451-710 |
| Cow position: | chr14:44482853-44483116 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 144 |
| Conread position: | 454-709 |
| Cow position: | chr14:27578581-27578848 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 457-711 |
| Cow position: | chr14:40737464-40737721 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 457-711 |
| Cow position: | chr14:46782186-46782455 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 186 |
| Conread position: | 457-712 |
| Cow position: | chr14:21863824-21864092 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 457-732 |
| Cow position: | chr14:15011256-15011547 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 463-711 |
| Cow position: | chr14:44772407-44772159 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 476-689 |
| Cow position: | chr14:42694113-42693893 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 482-732 |
| Cow position: | chr14:24989293-24989043 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 16 |
| Conread position: | 486-712 |
| Cow position: | chr14:40244335-40244111 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 568-732 |
| Cow position: | chr14:38000603-38000439 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 582-711 |
| Cow position: | chr14:2298846-2298975 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 604-732 |
| Cow position: | chr14:41713065-41712935 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.