Cow genome map

Conread name: Ss1.1-Mixc-0038,d19.5

Conread position: 433-709
Cow position: chr16:5132068-5131780 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 221

Conread position: 435-707
Cow position: chr16:43851016-43850731 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 42

Conread position: 444-673
Cow position: chr16:14441714-14441960 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 167

Conread position: 444-711
Cow position: chr16:15508778-15509031 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 52

Conread position: 447-729
Cow position: chr16:15734405-15734694 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 7

Conread position: 448-640
Cow position: chr16:15677388-15677597 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 448-646
Cow position: chr16:52487741-52487935 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 13

Conread position: 448-690
Cow position: chr16:12909802-12909563 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 93

Conread position: 448-704
Cow position: chr16:19632941-19632677 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 129

Conread position: 448-711
Cow position: chr16:4987769-4988029 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 29

Conread position: 448-716
Cow position: chr16:12243723-12243455 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 448-726
Cow position: chr16:6309662-6309938 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 87

Conread position: 448-732
Cow position: chr16:14799916-14799621 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 192

Conread position: 448-732
Cow position: chr16:19445620-19445900 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 59

Conread position: 449-694
Cow position: chr16:19152530-19152781 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 449-699
Cow position: chr16:341103-341356 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 58

Conread position: 449-717
Cow position: chr16:22786220-22785936 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 282

Conread position: 449-726
Cow position: chr16:41680938-41680649 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 137

Conread position: 449-730
Cow position: chr16:47728849-47729147 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 449-731
Cow position: chr16:17867644-17867358 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 104

Conread position: 449-732
Cow position: chr16:23035465-23035175 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 230

Conread position: 451-684
Cow position: chr16:44723186-44722955 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 74

Conread position: 451-711
Cow position: chr16:26655017-26655272 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 55

Conread position: 451-726
Cow position: chr16:30053543-30053809 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 60

Conread position: 454-729
Cow position: chr16:53547752-53547467 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 20, 136

Conread position: 456-722
Cow position: chr16:52814334-52814060 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 17

Conread position: 458-682
Cow position: chr16:42709297-42709080 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 35

Conread position: 458-711
Cow position: chr16:5477510-5477257 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 53

Conread position: 462-732
Cow position: chr16:36911200-36910919 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 142

Conread position: 478-688
Cow position: chr16:4676873-4677097 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 95

Conread position: 486-730
Cow position: chr16:45551718-45551956 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 20

Conread position: 498-732
Cow position: chr16:29205146-29204915 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 25

Conread position: 500-732
Cow position: chr16:13043711-13043946 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 46

Conread position: 518-685
Cow position: chr16:45157561-45157401 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 567-730
Cow position: chr16:47781256-47781418 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 114

Conread position: 606-702
Cow position: chr16:4856490-4856394 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 58

Show alignments to all cow chromosomes.