Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 444-685 |
| Cow position: | chr18:34021182-34021432 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 448-686 |
| Cow position: | chr18:54166306-54166065 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 448-699 |
| Cow position: | chr18:16258659-16258918 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 448-705 |
| Cow position: | chr18:22065563-22065282 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 448-708 |
| Cow position: | chr18:9806210-9806487 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 448-727 |
| Cow position: | chr18:48549792-48550076 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 448-730 |
| Cow position: | chr18:23317311-23317019 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 449-685 |
| Cow position: | chr18:34052188-34051947 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 449-702 |
| Cow position: | chr18:42060876-42061137 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 449-711 |
| Cow position: | chr18:54275328-54275599 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 450-684 |
| Cow position: | chr18:16726448-16726691 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 450-711 |
| Cow position: | chr18:36187733-36187474 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 451-709 |
| Cow position: | chr18:35472136-35471861 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 218 |
| Conread position: | 453-732 |
| Cow position: | chr18:29224487-29224787 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 454-696 |
| Cow position: | chr18:22434130-22433877 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 457-726 |
| Cow position: | chr18:8169979-8170265 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 17, 186 |
| Conread position: | 460-726 |
| Cow position: | chr18:28085379-28085658 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 501-711 |
| Cow position: | chr18:21291155-21290940 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 501-730 |
| Cow position: | chr18:23669414-23669177 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 501-732 |
| Cow position: | chr18:25847145-25846912 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 67 |
| Conread position: | 540-711 |
| Cow position: | chr18:31393490-31393659 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 554-726 |
| Cow position: | chr18:32860571-32860739 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 137, 0 |
Show alignments to all cow chromosomes.