Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 448-664 |
| Cow position: | chr20:20471662-20471883 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 448-684 |
| Cow position: | chr20:7600907-7600661 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 448-685 |
| Cow position: | chr20:2608696-2608931 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 448-699 |
| Cow position: | chr20:5576641-5576908 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 448-705 |
| Cow position: | chr20:10850627-10850383 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 448-711 |
| Cow position: | chr20:7539352-7539077 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 448-711 |
| Cow position: | chr20:13821711-13821434 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 232 |
| Conread position: | 448-711 |
| Cow position: | chr20:26084109-26083836 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 151 |
| Conread position: | 448-711 |
| Cow position: | chr20:31564097-31563828 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 448-726 |
| Cow position: | chr20:19238557-19238267 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 242 |
| Conread position: | 448-729 |
| Cow position: | chr20:16585763-16585468 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 234 |
| Conread position: | 448-731 |
| Cow position: | chr20:27843526-27843815 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 192 |
| Conread position: | 449-663 |
| Cow position: | chr20:15148140-15147918 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 449-709 |
| Cow position: | chr20:7803276-7803020 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 449-711 |
| Cow position: | chr20:2683404-2683667 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 187 |
| Conread position: | 449-715 |
| Cow position: | chr20:32578048-32577773 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 207 |
| Conread position: | 449-725 |
| Cow position: | chr20:25293466-25293757 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 449-730 |
| Cow position: | chr20:35897390-35897688 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 449-732 |
| Cow position: | chr20:27977834-27977541 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 234 |
| Conread position: | 451-726 |
| Cow position: | chr20:20351113-20350828 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 454-727 |
| Cow position: | chr20:13658965-13658682 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 20, 270 |
| Conread position: | 454-728 |
| Cow position: | chr20:14540229-14540504 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 454-732 |
| Cow position: | chr20:22920286-22920005 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 457-732 |
| Cow position: | chr20:17474907-17474616 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 462-731 |
| Cow position: | chr20:32153395-32153675 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 476-711 |
| Cow position: | chr20:3427054-3427275 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 518-709 |
| Cow position: | chr20:24644192-24644007 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 541-711 |
| Cow position: | chr20:35693669-35693839 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 573-711 |
| Cow position: | chr20:12122058-12121923 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 575-731 |
| Cow position: | chr20:24279979-24280139 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 592-702 |
| Cow position: | chr20:2858370-2858480 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.