Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 445-682 |
| Cow position: | chr23:7063687-7063440 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 447-675 |
| Cow position: | chr23:30128277-30128043 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 447-699 |
| Cow position: | chr23:7252901-7253159 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 447-709 |
| Cow position: | chr23:11069051-11069314 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 448-640 |
| Cow position: | chr23:3140698-3140890 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 448-648 |
| Cow position: | chr23:17092654-17092455 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 448-653 |
| Cow position: | chr23:645162-645375 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 448-678 |
| Cow position: | chr23:40526139-40525911 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 448-690 |
| Cow position: | chr23:23284979-23285206 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 448-709 |
| Cow position: | chr23:3715598-3715859 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 448-711 |
| Cow position: | chr23:39323691-39323952 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 448-720 |
| Cow position: | chr23:1663521-1663792 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 448-729 |
| Cow position: | chr23:792198-791914 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 448-732 |
| Cow position: | chr23:7751017-7751324 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 449-646 |
| Cow position: | chr23:9546232-9546445 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 134 |
| Conread position: | 449-725 |
| Cow position: | chr23:10415195-10414903 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 252 |
| Conread position: | 449-726 |
| Cow position: | chr23:21631063-21631336 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 449-727 |
| Cow position: | chr23:9725394-9725123 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 450-732 |
| Cow position: | chr23:25408671-25408960 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 451-711 |
| Cow position: | chr23:10845059-10844791 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 228 |
| Conread position: | 454-657 |
| Cow position: | chr23:16609970-16609755 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 459-711 |
| Cow position: | chr23:9192252-9192001 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 477-732 |
| Cow position: | chr23:38026959-38026692 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 138 |
| Conread position: | 501-731 |
| Cow position: | chr23:30745693-30745447 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 200 |
| Conread position: | 507-732 |
| Cow position: | chr23:16170614-16170835 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 204, 53 |
| Conread position: | 559-711 |
| Cow position: | chr23:8737880-8737727 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 565-730 |
| Cow position: | chr23:5265554-5265388 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 147, 128 |
Show alignments to all cow chromosomes.