Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 447-726 |
| Cow position: | chr25:30035373-30035667 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 448-648 |
| Cow position: | chr25:12756739-12756526 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 448-691 |
| Cow position: | chr25:33786256-33786008 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 448-711 |
| Cow position: | chr25:13472064-13471802 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 448-711 |
| Cow position: | chr25:26757268-26757547 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 233 |
| Conread position: | 448-717 |
| Cow position: | chr25:32472238-32472508 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 448-727 |
| Cow position: | chr25:34236735-34236459 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 449-700 |
| Cow position: | chr25:13122998-13123246 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 454-711 |
| Cow position: | chr25:23355748-23356013 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 457-613 |
| Cow position: | chr25:16240976-16240813 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 457-711 |
| Cow position: | chr25:38357938-38358193 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 461-732 |
| Cow position: | chr25:10013577-10013309 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 479-730 |
| Cow position: | chr25:18206446-18206182 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 501-732 |
| Cow position: | chr25:17660140-17660380 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 510-711 |
| Cow position: | chr25:34639466-34639263 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 515-722 |
| Cow position: | chr25:14279163-14279381 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 545-732 |
| Cow position: | chr25:5567834-5567640 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 554-732 |
| Cow position: | chr25:18644135-18643951 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 573-674 |
| Cow position: | chr25:31049364-31049466 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.