Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 21-169 |
| Cow position: | chr28:22613289-22613435 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 290-732 |
| Cow position: | chr28:22613613-22614044 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 21 |
| Conread position: | 436-641 |
| Cow position: | chr28:23352391-23352614 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 447-673 |
| Cow position: | chr28:4098675-4098899 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 447-732 |
| Cow position: | chr28:6486430-6486725 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 448-682 |
| Cow position: | chr28:34208540-34208788 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 174 |
| Conread position: | 448-685 |
| Cow position: | chr28:480584-480348 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 448-698 |
| Cow position: | chr28:10674525-10674766 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 448-709 |
| Cow position: | chr28:25796960-25797223 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 167 |
| Conread position: | 448-709 |
| Cow position: | chr28:34199260-34199003 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 448-711 |
| Cow position: | chr28:2340369-2340643 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 272 |
| Conread position: | 448-711 |
| Cow position: | chr28:11380205-11379933 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 448-711 |
| Cow position: | chr28:20265226-20265508 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 448-717 |
| Cow position: | chr28:22855142-22855406 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 448-722 |
| Cow position: | chr28:6277703-6277430 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 448-727 |
| Cow position: | chr28:13725999-13726288 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 448-732 |
| Cow position: | chr28:7607065-7607362 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 215 |
| Conread position: | 448-732 |
| Cow position: | chr28:22583466-22583749 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 449-732 |
| Cow position: | chr28:13936251-13936528 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 451-709 |
| Cow position: | chr28:30370640-30370893 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 457-711 |
| Cow position: | chr28:16487146-16487407 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 462-732 |
| Cow position: | chr28:22829778-22830055 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 88 |
| Conread position: | 512-705 |
| Cow position: | chr28:16466526-16466724 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 591-721 |
| Cow position: | chr28:15915263-15915131 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 604-718 |
| Cow position: | chr28:34347250-34347136 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.