Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 411-732 |
| Cow position: | chr7:48335639-48335305 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 444-732 |
| Cow position: | chr7:29378273-29377987 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 448-666 |
| Cow position: | chr7:20289396-20289177 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 448-684 |
| Cow position: | chr7:11872724-11872487 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 448-691 |
| Cow position: | chr7:56682867-56682631 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 448-711 |
| Cow position: | chr7:25223473-25223734 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 448-711 |
| Cow position: | chr7:37366858-37367126 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 448-711 |
| Cow position: | chr7:39551060-39550810 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 448-722 |
| Cow position: | chr7:62515881-62516164 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 213 |
| Conread position: | 448-725 |
| Cow position: | chr7:40621809-40622103 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 448-726 |
| Cow position: | chr7:66335884-66335607 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 167 |
| Conread position: | 448-731 |
| Cow position: | chr7:20105145-20104856 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 448-731 |
| Cow position: | chr7:28672143-28671855 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 448-732 |
| Cow position: | chr7:35171692-35171409 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 448-732 |
| Cow position: | chr7:37024717-37024995 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 448-732 |
| Cow position: | chr7:42222556-42222270 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 448-732 |
| Cow position: | chr7:52130383-52130674 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 236 |
| Conread position: | 448-732 |
| Cow position: | chr7:61425430-61425717 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 449-678 |
| Cow position: | chr7:12413426-12413197 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 449-678 |
| Cow position: | chr7:25703351-25703113 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 449-706 |
| Cow position: | chr7:23256978-23256716 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 449-709 |
| Cow position: | chr7:58841522-58841791 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 206 |
| Conread position: | 449-730 |
| Cow position: | chr7:34669987-34670287 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 450-616 |
| Cow position: | chr7:8316608-8316441 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 148 |
| Conread position: | 451-678 |
| Cow position: | chr7:24667267-24667496 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 452-699 |
| Cow position: | chr7:61461087-61460836 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 452-726 |
| Cow position: | chr7:35754334-35754620 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 453-712 |
| Cow position: | chr7:27709789-27709519 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 457-712 |
| Cow position: | chr7:11593312-11593062 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 457-730 |
| Cow position: | chr7:34162660-34162945 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 198 |
| Conread position: | 458-663 |
| Cow position: | chr7:48815513-48815721 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 460-687 |
| Cow position: | chr7:60761244-60761485 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 462-709 |
| Cow position: | chr7:63548140-63547879 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 16, 160 |
| Conread position: | 462-732 |
| Cow position: | chr7:63327973-63328243 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 464-732 |
| Cow position: | chr7:43004266-43004548 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 473-732 |
| Cow position: | chr7:1398382-1398117 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 49 |
| Conread position: | 484-711 |
| Cow position: | chr7:3731903-3732127 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 485-709 |
| Cow position: | chr7:21394319-21394091 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 501-711 |
| Cow position: | chr7:39512666-39512454 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 502-721 |
| Cow position: | chr7:13822711-13822937 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 507-712 |
| Cow position: | chr7:28561096-28560889 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 529-711 |
| Cow position: | chr7:11187176-11187362 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 595-711 |
| Cow position: | chr7:61754620-61754735 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.