Cow genome map
| Conread name: | Ss1.1-Mixc-0038,d19.5 |
| Conread position: | 448-685 |
| Cow position: | chr8:11057997-11058234 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 448-688 |
| Cow position: | chr8:9985453-9985683 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 448-695 |
| Cow position: | chr8:11896060-11896300 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 448-709 |
| Cow position: | chr8:23160794-23161060 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 26, 243 |
| Conread position: | 448-709 |
| Cow position: | chr8:25847458-25847731 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 448-711 |
| Cow position: | chr8:38248853-38248592 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 448-711 |
| Cow position: | chr8:42649355-42649103 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 448-711 |
| Cow position: | chr8:61098203-61097929 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 448-726 |
| Cow position: | chr8:4337222-4336944 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 448-732 |
| Cow position: | chr8:51878086-51877804 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 449-675 |
| Cow position: | chr8:42315192-42314970 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 449-684 |
| Cow position: | chr8:24237595-24237838 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 161 |
| Conread position: | 449-706 |
| Cow position: | chr8:50266137-50266397 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 449-709 |
| Cow position: | chr8:45686585-45686323 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 449-710 |
| Cow position: | chr8:12720607-12720865 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 449-711 |
| Cow position: | chr8:12660909-12660642 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 449-732 |
| Cow position: | chr8:2974489-2974784 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 449-732 |
| Cow position: | chr8:24517591-24517311 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 450-691 |
| Cow position: | chr8:21078380-21078631 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 451-684 |
| Cow position: | chr8:34133084-34132846 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 451-711 |
| Cow position: | chr8:11792042-11792309 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 452-732 |
| Cow position: | chr8:54158574-54158866 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 454-685 |
| Cow position: | chr8:55550881-55551101 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 454-699 |
| Cow position: | chr8:30022076-30021818 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 454-706 |
| Cow position: | chr8:54070611-54070857 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 454-711 |
| Cow position: | chr8:22103336-22103086 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 454-732 |
| Cow position: | chr8:41951465-41951732 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 457-732 |
| Cow position: | chr8:27368948-27369221 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 460-675 |
| Cow position: | chr8:44127255-44127463 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 463-711 |
| Cow position: | chr8:40432994-40432755 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 464-725 |
| Cow position: | chr8:32719827-32720098 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 193 |
| Conread position: | 473-711 |
| Cow position: | chr8:37482568-37482326 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 476-732 |
| Cow position: | chr8:8481083-8480808 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 24, 219 |
| Conread position: | 477-699 |
| Cow position: | chr8:6409705-6409475 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 501-727 |
| Cow position: | chr8:33437679-33437919 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 204 |
| Conread position: | 501-731 |
| Cow position: | chr8:19301089-19301327 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 501-732 |
| Cow position: | chr8:48682599-48682361 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 515-699 |
| Cow position: | chr8:19369574-19369388 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 518-732 |
| Cow position: | chr8:12790925-12790712 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 549-727 |
| Cow position: | chr8:31886692-31886871 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 580-730 |
| Cow position: | chr8:23441154-23441001 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 591-726 |
| Cow position: | chr8:21119282-21119147 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 592-732 |
| Cow position: | chr8:19876818-19876677 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 605-732 |
| Cow position: | chr8:19772502-19772629 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 97 |
Show alignments to all cow chromosomes.